RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 ZBED2Q9BTP6 218 aa23.9■■□□□ 1.42
PSEN1-225ENST00000560005 LMCD1Q9NZU5 365 aa23.9■■□□□ 1.42
PSEN1-225ENST00000560005 MTUS1Q9ULD2 1270 aa23.9■■□□□ 1.42
PSEN1-225ENST00000560005 U3KPZ7 1027 aaPredicted RBP23.9■■□□□ 1.42
PSEN1-225ENST00000560005 TRIP12Q14669 1992 aaPredicted RBP23.89■■□□□ 1.42
PSEN1-225ENST00000560005 NKRFO15226 690 aaKnown RBP eCLIP23.89■■□□□ 1.41
PSEN1-225ENST00000560005 PDE4DQ08499 809 aa23.89■■□□□ 1.41
PSEN1-225ENST00000560005 TTBK2Q6IQ55 1244 aa23.89■■□□□ 1.41
PSEN1-225ENST00000560005 ALYREFQ86V81 257 aaKnown RBP23.89■■□□□ 1.41
PSEN1-225ENST00000560005 IL25Q9H293 177 aa23.89■■□□□ 1.41
PSEN1-225ENST00000560005 INCENPQ9NQS7 918 aa23.89■■□□□ 1.41
PSEN1-225ENST00000560005 DEFB103AP81534 67 aa23.88■■□□□ 1.41
PSEN1-225ENST00000560005 PTGISQ16647 500 aa23.88■■□□□ 1.41
PSEN1-225ENST00000560005 SCFD2Q8WU76 684 aa23.88■■□□□ 1.41
PSEN1-225ENST00000560005 DCAF4Q8WV16 495 aa23.88■■□□□ 1.41
PSEN1-225ENST00000560005 KIF2CQ99661 725 aa23.88■■□□□ 1.41
PSEN1-225ENST00000560005 DSCC1Q9BVC3 393 aa23.88■■□□□ 1.41
PSEN1-225ENST00000560005 UBE2ZQ9H832 354 aaPredicted RBP23.88■■□□□ 1.41
PSEN1-225ENST00000560005 SUGCTQ9HAC7 445 aa23.88■■□□□ 1.41
PSEN1-225ENST00000560005 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.88■■□□□ 1.41
PSEN1-225ENST00000560005 ST18O60284 1047 aa23.87■■□□□ 1.41
PSEN1-225ENST00000560005 GPNMBQ14956 572 aa23.87■■□□□ 1.41
PSEN1-225ENST00000560005 SYDE2Q5VT97 1194 aa23.87■■□□□ 1.41
PSEN1-225ENST00000560005 RNF207Q6ZRF8 634 aa23.87■■□□□ 1.41
PSEN1-225ENST00000560005 HSCBQ8IWL3 235 aa23.87■■□□□ 1.41
PSEN1-225ENST00000560005 CCDC155Q8N6L0 562 aa23.87■■□□□ 1.41
PSEN1-225ENST00000560005 CAGE1Q8TC20 777 aa23.87■■□□□ 1.41
PSEN1-225ENST00000560005 AFAP1L1Q8TED9 768 aa23.87■■□□□ 1.41
PSEN1-225ENST00000560005 CLEC4DQ8WXI8 215 aa23.87■■□□□ 1.41
PSEN1-225ENST00000560005 KCNB2Q92953 911 aa23.87■■□□□ 1.41
PSEN1-225ENST00000560005 TXNP10599 105 aaKnown RBP23.86■■□□□ 1.41
PSEN1-225ENST00000560005 PTH1RQ03431 593 aa23.86■■□□□ 1.41
PSEN1-225ENST00000560005 CTDSPL2Q05D32 466 aa23.86■■□□□ 1.41
PSEN1-225ENST00000560005 GJD3Q8N144 294 aa23.86■■□□□ 1.41
PSEN1-225ENST00000560005 CTAGE1Q96RT6 745 aa23.86■■□□□ 1.41
PSEN1-225ENST00000560005 CTNNA3Q9UI47 895 aa23.86■■□□□ 1.41
PSEN1-225ENST00000560005 PRR33A8MZF0 331 aa23.85■■□□□ 1.41
PSEN1-225ENST00000560005 RANBP6O60518 1105 aaKnown RBP23.85■■□□□ 1.41
PSEN1-225ENST00000560005 KCNA5P22460 613 aa23.85■■□□□ 1.41
PSEN1-225ENST00000560005 EDNRBP24530 442 aa23.85■■□□□ 1.41
PSEN1-225ENST00000560005 NECTIN1Q15223 517 aa23.85■■□□□ 1.41
PSEN1-225ENST00000560005 BTNL9Q6UXG8 535 aa23.85■■□□□ 1.41
PSEN1-225ENST00000560005 LRRC8DQ7L1W4 858 aa23.85■■□□□ 1.41
PSEN1-225ENST00000560005 FAM178BQ8IXR5 827 aa23.85■■□□□ 1.41
PSEN1-225ENST00000560005 MPHOSPH6Q99547 160 aaKnown RBP23.85■■□□□ 1.41
PSEN1-225ENST00000560005 RBM8AQ9Y5S9 174 aaKnown RBP23.85■■□□□ 1.41
PSEN1-225ENST00000560005 FRMPD2Q68DX3 1309 aaPredicted RBP23.84■■□□□ 1.41
PSEN1-225ENST00000560005 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.84■■□□□ 1.41
PSEN1-225ENST00000560005 ARIH2O95376 493 aa23.84■■□□□ 1.41
PSEN1-225ENST00000560005 GJB5O95377 273 aa23.84■■□□□ 1.41
PSEN1-225ENST00000560005 SELPP16109 830 aa23.84■■□□□ 1.41
PSEN1-225ENST00000560005 NOVP48745 357 aa23.84■■□□□ 1.41
PSEN1-225ENST00000560005 MCM2P49736 904 aa23.84■■□□□ 1.41
PSEN1-225ENST00000560005 ERVK-21P61565 698 aa23.84■■□□□ 1.41
PSEN1-225ENST00000560005 RPS6P62753 249 aaKnown RBP23.84■■□□□ 1.41
PSEN1-225ENST00000560005 KRT32Q14532 448 aa23.84■■□□□ 1.41
PSEN1-225ENST00000560005 LEXMQ3ZCV2 418 aa23.84■■□□□ 1.41
PSEN1-225ENST00000560005 GDF6Q6KF10 455 aaPredicted RBP23.84■■□□□ 1.41
PSEN1-225ENST00000560005 CNKSR3Q6P9H4 555 aa23.84■■□□□ 1.41
PSEN1-225ENST00000560005 ZNF589Q86UQ0 364 aaPredicted RBP23.84■■□□□ 1.41
PSEN1-225ENST00000560005 TGS1Q96RS0 853 aaKnown RBP23.84■■□□□ 1.41
PSEN1-225ENST00000560005 RAD9AQ99638 391 aa23.84■■□□□ 1.41
PSEN1-225ENST00000560005 LINC01553A4QN01 128 aa23.83■■□□□ 1.41
PSEN1-225ENST00000560005 PSMA5P28066 241 aa23.83■■□□□ 1.41
PSEN1-225ENST00000560005 SSTR3P32745 418 aaPredicted RBP23.83■■□□□ 1.41
PSEN1-225ENST00000560005 TCTN1Q2MV58 587 aa23.83■■□□□ 1.41
PSEN1-225ENST00000560005 TSGA10IPQ3SY00 556 aa23.83■■□□□ 1.41
PSEN1-225ENST00000560005 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.83■■□□□ 1.41
PSEN1-225ENST00000560005 DHX38Q92620 1227 aaKnown RBP23.83■■□□□ 1.41
PSEN1-225ENST00000560005 TM6SF1Q9BZW5 370 aa23.83■■□□□ 1.41
PSEN1-225ENST00000560005 GPCPD1Q9NPB8 672 aa23.83■■□□□ 1.41
PSEN1-225ENST00000560005 RBAK-RBAKDNI3L0D1 243 aa23.82■■□□□ 1.4
PSEN1-225ENST00000560005 FOXP2O15409 715 aa23.82■■□□□ 1.4
PSEN1-225ENST00000560005 NBNO60934 754 aa23.82■■□□□ 1.4
PSEN1-225ENST00000560005 IL9P15248 144 aa23.82■■□□□ 1.4
PSEN1-225ENST00000560005 AFG1LQ8WV93 481 aa23.82■■□□□ 1.4
PSEN1-225ENST00000560005 UIMC1Q96RL1 719 aa23.82■■□□□ 1.4
PSEN1-225ENST00000560005 CXCL10P02778 98 aa23.81■■□□□ 1.4
PSEN1-225ENST00000560005 CREB3L3Q68CJ9 461 aa23.81■■□□□ 1.4
PSEN1-225ENST00000560005 FAM117BQ6P1L5 589 aa23.81■■□□□ 1.4
PSEN1-225ENST00000560005 SESTD1Q86VW0 696 aa23.81■■□□□ 1.4
PSEN1-225ENST00000560005 DNERQ8NFT8 737 aa23.81■■□□□ 1.4
PSEN1-225ENST00000560005 SNX14Q9Y5W7 946 aa23.81■■□□□ 1.4
PSEN1-225ENST00000560005 SIP14410 1827 aa23.81■■□□□ 1.4
PSEN1-225ENST00000560005 WDFY4Q6ZS81 3184 aa23.8■■□□□ 1.4
PSEN1-225ENST00000560005 ABHD14A-ACY1A0A1B0GW23 586 aa23.8■■□□□ 1.4
PSEN1-225ENST00000560005 MMP3P08254 477 aa23.8■■□□□ 1.4
PSEN1-225ENST00000560005 HSPD1P10809 573 aaKnown RBP23.8■■□□□ 1.4
PSEN1-225ENST00000560005 CKBP12277 381 aa23.8■■□□□ 1.4
PSEN1-225ENST00000560005 PTCRAQ6ISU1 281 aaPredicted RBP23.8■■□□□ 1.4
PSEN1-225ENST00000560005 KAT2BQ92831 832 aa23.8■■□□□ 1.4
PSEN1-225ENST00000560005 PARNO95453 639 aaKnown RBP23.79■■□□□ 1.4
PSEN1-225ENST00000560005 RBL2Q08999 1139 aa23.79■■□□□ 1.4
PSEN1-225ENST00000560005 CCDC62Q6P9F0 684 aa23.79■■□□□ 1.4
PSEN1-225ENST00000560005 TMEM47Q9BQJ4 181 aa23.79■■□□□ 1.4
PSEN1-225ENST00000560005 B4DLN1 442 aa23.78■■□□□ 1.4
PSEN1-225ENST00000560005 SLC27A2O14975 620 aa23.78■■□□□ 1.4
PSEN1-225ENST00000560005 TOP1P11387 765 aaKnown RBP23.78■■□□□ 1.4
PSEN1-225ENST00000560005 ALADP13716 330 aa23.78■■□□□ 1.4
PSEN1-225ENST00000560005 NEK4P51957 841 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms