RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 KIAA0895Q8NCT3 520 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 SLC16A10Q8TF71 515 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 UBE2Q2Q8WVN8 375 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 C7orf43Q8WVR3 580 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 CRYGNQ8WXF5 182 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 HAS1Q92839 578 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 TSG101Q99816 390 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 DESI2Q9BSY9 194 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 AMNQ9BXJ7 453 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 ANO3Q9BYT9 981 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 EDEM3Q9BZQ6 932 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 TTYH3Q9C0H2 523 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 HAUS4Q9H6D7 363 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 KCNMB3Q9NPA1 279 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 MAPK8IP1Q9UQF2 711 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 PITPNM2Q9BZ72 1349 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 TTC26A0AVF1 554 aa9.01□□□□□ -0.97
SMAD3-212ENST00000559937 POTEMA6NI47 508 aa9.01□□□□□ -0.97
SMAD3-212ENST00000559937 POTEB2H3BUK9 544 aa9.01□□□□□ -0.97
SMAD3-212ENST00000559937 NDUFA10O95299 355 aa9.01□□□□□ -0.97
SMAD3-212ENST00000559937 PRKCSHP14314 528 aaPredicted RBP9.01□□□□□ -0.97
SMAD3-212ENST00000559937 HNRNPH3P31942 346 aaKnown RBP9.01□□□□□ -0.97
SMAD3-212ENST00000559937 CIITAP33076 1130 aa9.01□□□□□ -0.97
SMAD3-212ENST00000559937 KRT83P78385 493 aa9.01□□□□□ -0.97
SMAD3-212ENST00000559937 ATP2B2Q01814 1243 aa9.01□□□□□ -0.97
SMAD3-212ENST00000559937 TBC1D8BQ0IIM8 1120 aa9.01□□□□□ -0.97
SMAD3-212ENST00000559937 MAN2A1Q16706 1144 aa9.01□□□□□ -0.97
SMAD3-212ENST00000559937 ERCC6LQ2NKX8 1250 aa9.01□□□□□ -0.97
SMAD3-212ENST00000559937 FBXO38Q6PIJ6 1188 aa9.01□□□□□ -0.97
SMAD3-212ENST00000559937 KCTD1Q719H9 257 aa9.01□□□□□ -0.97
SMAD3-212ENST00000559937 RSRC2Q7L4I2 434 aaKnown RBP9.01□□□□□ -0.97
SMAD3-212ENST00000559937 SH3BP5LQ7L8J4 393 aa9.01□□□□□ -0.97
SMAD3-212ENST00000559937 FBXO11Q86XK2 927 aa9.01□□□□□ -0.97
SMAD3-212ENST00000559937 ZFPM1Q8IX07 1006 aa9.01□□□□□ -0.97
SMAD3-212ENST00000559937 CCDC65Q8IXS2 484 aa9.01□□□□□ -0.97
SMAD3-212ENST00000559937 CCDC170Q8IYT3 715 aa9.01□□□□□ -0.97
SMAD3-212ENST00000559937 CEP112Q8N8E3 955 aa9.01□□□□□ -0.97
SMAD3-212ENST00000559937 RABGGTAQ92696 567 aa9.01□□□□□ -0.97
SMAD3-212ENST00000559937 DNAJC19Q96DA6 116 aa9.01□□□□□ -0.97
SMAD3-212ENST00000559937 SYT17Q9BSW7 474 aa9.01□□□□□ -0.97
SMAD3-212ENST00000559937 CARD6Q9BX69 1037 aa9.01□□□□□ -0.97
SMAD3-212ENST00000559937 VPS33BQ9H267 617 aa9.01□□□□□ -0.97
SMAD3-212ENST00000559937 BMP2KQ9NSY1 1161 aaPredicted RBP9.01□□□□□ -0.97
SMAD3-212ENST00000559937 ZNHIT6Q9NWK9 470 aaKnown RBP9.01□□□□□ -0.97
SMAD3-212ENST00000559937 FAM53CQ9NYF3 392 aa9.01□□□□□ -0.97
SMAD3-212ENST00000559937 CDC23Q9UJX2 597 aa9.01□□□□□ -0.97
SMAD3-212ENST00000559937 PCDHA12Q9UN75 941 aa9.01□□□□□ -0.97
SMAD3-212ENST00000559937 PCDHA1Q9Y5I3 950 aa9.01□□□□□ -0.97
SMAD3-212ENST00000559937 EPN1Q9Y6I3 576 aaPredicted RBP9.01□□□□□ -0.97
SMAD3-212ENST00000559937 CTAGE9A4FU28 777 aa9□□□□□ -0.97
SMAD3-212ENST00000559937 EIF3CLB5ME19 914 aaKnown RBP9□□□□□ -0.97
SMAD3-212ENST00000559937 F5H6K3 240 aa9□□□□□ -0.97
SMAD3-212ENST00000559937 RNF225M0QZC1 329 aaPredicted RBP9□□□□□ -0.97
SMAD3-212ENST00000559937 MEIS2O14770 477 aa9□□□□□ -0.97
SMAD3-212ENST00000559937 MARCH6O60337 910 aa9□□□□□ -0.97
SMAD3-212ENST00000559937 COBLO75128 1261 aa9□□□□□ -0.97
SMAD3-212ENST00000559937 FCER1AP12319 257 aa9□□□□□ -0.97
SMAD3-212ENST00000559937 SLC16A2P36021 539 aa9□□□□□ -0.97
SMAD3-212ENST00000559937 SREBF1P36956 1147 aa9□□□□□ -0.97
SMAD3-212ENST00000559937 ARHGAP25P42331 645 aa9□□□□□ -0.97
SMAD3-212ENST00000559937 RBM5P52756 815 aaKnown RBP eCLIP9□□□□□ -0.97
SMAD3-212ENST00000559937 KLRC3Q07444 240 aa9□□□□□ -0.97
SMAD3-212ENST00000559937 BMS1Q14692 1282 aaKnown RBP9□□□□□ -0.97
SMAD3-212ENST00000559937 WHAMMP3Q1A5X7 153 aa9□□□□□ -0.97
SMAD3-212ENST00000559937 Q4G0T1 1027 aa9□□□□□ -0.97
SMAD3-212ENST00000559937 ZCWPW2Q504Y3 356 aa9□□□□□ -0.97
SMAD3-212ENST00000559937 MIIPQ5JXC2 388 aa9□□□□□ -0.97
SMAD3-212ENST00000559937 RBM26Q5T8P6 1007 aaKnown RBP9□□□□□ -0.97
SMAD3-212ENST00000559937 SYDE2Q5VT97 1194 aa9□□□□□ -0.97
SMAD3-212ENST00000559937 FKBP1CQ5VVH2 108 aa9□□□□□ -0.97
SMAD3-212ENST00000559937 HAUS3Q68CZ6 603 aa9□□□□□ -0.97
SMAD3-212ENST00000559937 PPP4R3CPQ6ZMV5 832 aa9□□□□□ -0.97
SMAD3-212ENST00000559937 SRGAP1Q7Z6B7 1085 aa9□□□□□ -0.97
SMAD3-212ENST00000559937 CCDC84Q86UT8 332 aaPredicted RBP9□□□□□ -0.97
SMAD3-212ENST00000559937 SIAH1Q8IUQ4 282 aa9□□□□□ -0.97
SMAD3-212ENST00000559937 EHBP1Q8NDI1 1231 aa9□□□□□ -0.97
SMAD3-212ENST00000559937 ERMNQ8TAM6 284 aa9□□□□□ -0.97
SMAD3-212ENST00000559937 DDX12PQ92771 950 aa9□□□□□ -0.97
SMAD3-212ENST00000559937 GOLGA1Q92805 767 aa9□□□□□ -0.97
SMAD3-212ENST00000559937 FAM20AQ96MK3 541 aa9□□□□□ -0.97
SMAD3-212ENST00000559937 CEP63Q96MT8 703 aa9□□□□□ -0.97
SMAD3-212ENST00000559937 EIF3CQ99613 913 aaKnown RBP9□□□□□ -0.97
SMAD3-212ENST00000559937 NAPGQ99747 312 aaPredicted RBP9□□□□□ -0.97
SMAD3-212ENST00000559937 NOC4LQ9BVI4 516 aaKnown RBP9□□□□□ -0.97
SMAD3-212ENST00000559937 FHDC1Q9C0D6 1143 aaPredicted RBP9□□□□□ -0.97
SMAD3-212ENST00000559937 SEMA6BQ9H3T3 888 aa9□□□□□ -0.97
SMAD3-212ENST00000559937 SLC39A2Q9NP94 309 aa9□□□□□ -0.97
SMAD3-212ENST00000559937 TMOD2Q9NZR1 351 aa9□□□□□ -0.97
SMAD3-212ENST00000559937 NOL12Q9UGY1 213 aaKnown RBP eCLIP9□□□□□ -0.97
SMAD3-212ENST00000559937 V9GYY5 206 aaPredicted RBP9□□□□□ -0.97
SMAD3-212ENST00000559937 MYH11P35749 1972 aa9□□□□□ -0.97
SMAD3-212ENST00000559937 DCAF8L1A6NGE4 600 aa8.99□□□□□ -0.97
SMAD3-212ENST00000559937 B4DLN1 442 aa8.99□□□□□ -0.97
SMAD3-212ENST00000559937 PIK3CDO00329 1044 aa8.99□□□□□ -0.97
SMAD3-212ENST00000559937 PLA2G6O60733 806 aa8.99□□□□□ -0.97
SMAD3-212ENST00000559937 GNA14O95837 355 aa8.99□□□□□ -0.97
SMAD3-212ENST00000559937 NDUFB10O96000 172 aa8.99□□□□□ -0.97
SMAD3-212ENST00000559937 TUBBP07437 444 aa8.99□□□□□ -0.97
SMAD3-212ENST00000559937 CYP3A4P08684 503 aa8.99□□□□□ -0.97
SMAD3-212ENST00000559937 BMP3P12645 472 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms