RNA–Protein interactions for RNA: ENST00000559793.5

CTDSPL2-208, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-208ENST00000559793 GRIN2CQ14957 1233 aa9.68□□□□□ -0.86
CTDSPL2-208ENST00000559793 TLR1Q15399 786 aa9.68□□□□□ -0.86
CTDSPL2-208ENST00000559793 C12orf60Q5U649 245 aa9.68□□□□□ -0.86
CTDSPL2-208ENST00000559793 RNF180Q86T96 592 aa9.68□□□□□ -0.86
CTDSPL2-208ENST00000559793 RIOX2Q8IUF8 465 aa9.68□□□□□ -0.86
CTDSPL2-208ENST00000559793 FTSJ3Q8IY81 847 aaKnown RBP9.68□□□□□ -0.86
CTDSPL2-208ENST00000559793 RNPC3Q96LT9 517 aaKnown RBP9.68□□□□□ -0.86
CTDSPL2-208ENST00000559793 CCDC17Q96LX7 622 aa9.68□□□□□ -0.86
CTDSPL2-208ENST00000559793 MMP19Q99542 508 aa9.68□□□□□ -0.86
CTDSPL2-208ENST00000559793 PRDM6Q9NQX0 595 aa9.68□□□□□ -0.86
CTDSPL2-208ENST00000559793 TMEM39AQ9NV64 488 aa9.68□□□□□ -0.86
CTDSPL2-208ENST00000559793 DIS3Q9Y2L1 958 aaKnown RBP9.68□□□□□ -0.86
CTDSPL2-208ENST00000559793 DYRK1BQ9Y463 629 aa9.68□□□□□ -0.86
CTDSPL2-208ENST00000559793 MAFBQ9Y5Q3 323 aaPredicted RBP9.68□□□□□ -0.86
CTDSPL2-208ENST00000559793 A0A1W2PQ45 241 aaPredicted RBP9.67□□□□□ -0.86
CTDSPL2-208ENST00000559793 A0A1W2PQY0 241 aa9.67□□□□□ -0.86
CTDSPL2-208ENST00000559793 USP17L12C9JPN9 530 aa9.67□□□□□ -0.86
CTDSPL2-208ENST00000559793 USP17L21D6R901 530 aa9.67□□□□□ -0.86
CTDSPL2-208ENST00000559793 VWA5AO00534 786 aa9.67□□□□□ -0.86
CTDSPL2-208ENST00000559793 WDR46O15213 610 aaKnown RBP9.67□□□□□ -0.86
CTDSPL2-208ENST00000559793 PQBP1O60828 265 aaKnown RBP9.67□□□□□ -0.86
CTDSPL2-208ENST00000559793 ADAMTS4O75173 837 aa9.67□□□□□ -0.86
CTDSPL2-208ENST00000559793 CHGBP05060 677 aa9.67□□□□□ -0.86
CTDSPL2-208ENST00000559793 SMTNP53814 917 aa9.67□□□□□ -0.86
CTDSPL2-208ENST00000559793 ICA1Q05084 483 aa9.67□□□□□ -0.86
CTDSPL2-208ENST00000559793 TMEM214Q6NUQ4 689 aaKnown RBP9.67□□□□□ -0.86
CTDSPL2-208ENST00000559793 ANKRD33Q7Z3H0 272 aa9.67□□□□□ -0.86
CTDSPL2-208ENST00000559793 REPS2Q8NFH8 660 aa9.67□□□□□ -0.86
CTDSPL2-208ENST00000559793 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.67□□□□□ -0.86
CTDSPL2-208ENST00000559793 LENG1Q96BZ8 264 aaPredicted RBP9.67□□□□□ -0.86
CTDSPL2-208ENST00000559793 TOX2Q96NM4 488 aa9.67□□□□□ -0.86
CTDSPL2-208ENST00000559793 DNAJC2Q99543 621 aaKnown RBP9.67□□□□□ -0.86
CTDSPL2-208ENST00000559793 ATP8A2Q9NTI2 1148 aa9.67□□□□□ -0.86
CTDSPL2-208ENST00000559793 SERTAD1Q9UHV2 236 aa9.67□□□□□ -0.86
CTDSPL2-208ENST00000559793 ZNF214Q9UL59 606 aaPredicted RBP9.67□□□□□ -0.86
CTDSPL2-208ENST00000559793 TMEM265A0A087WTH1 108 aa9.66□□□□□ -0.86
CTDSPL2-208ENST00000559793 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.66□□□□□ -0.86
CTDSPL2-208ENST00000559793 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.66□□□□□ -0.86
CTDSPL2-208ENST00000559793 MBD4O95243 580 aa9.66□□□□□ -0.86
CTDSPL2-208ENST00000559793 SNAI1O95863 264 aaPredicted RBP9.66□□□□□ -0.86
CTDSPL2-208ENST00000559793 ADD2P35612 726 aa9.66□□□□□ -0.86
CTDSPL2-208ENST00000559793 ATP1A2P50993 1020 aa9.66□□□□□ -0.86
CTDSPL2-208ENST00000559793 ACLYP53396 1101 aa9.66□□□□□ -0.86
CTDSPL2-208ENST00000559793 CLDN10P78369 228 aa9.66□□□□□ -0.86
CTDSPL2-208ENST00000559793 FPGSQ05932 587 aa9.66□□□□□ -0.86
CTDSPL2-208ENST00000559793 KCTD2Q14681 263 aa9.66□□□□□ -0.86
CTDSPL2-208ENST00000559793 KCNA10Q16322 511 aa9.66□□□□□ -0.86
CTDSPL2-208ENST00000559793 GNASQ5JWF2 1037 aa9.66□□□□□ -0.86
CTDSPL2-208ENST00000559793 CCSAPQ6IQ19 270 aaPredicted RBP9.66□□□□□ -0.86
CTDSPL2-208ENST00000559793 C16orf59Q7L2K0 433 aa9.66□□□□□ -0.86
CTDSPL2-208ENST00000559793 GPR161Q8N6U8 529 aaKnown RBP9.66□□□□□ -0.86
CTDSPL2-208ENST00000559793 USP38Q8NB14 1042 aa9.66□□□□□ -0.86
CTDSPL2-208ENST00000559793 KLHDC9Q8NEP7 349 aa9.66□□□□□ -0.86
CTDSPL2-208ENST00000559793 ZNF576Q9H609 170 aa9.66□□□□□ -0.86
CTDSPL2-208ENST00000559793 SH2D4AQ9H788 454 aa9.66□□□□□ -0.86
CTDSPL2-208ENST00000559793 KANSL2Q9H9L4 492 aa9.66□□□□□ -0.86
CTDSPL2-208ENST00000559793 TIMMDC1Q9NPL8 285 aa9.66□□□□□ -0.86
CTDSPL2-208ENST00000559793 CUEDC1Q9NWM3 386 aaPredicted RBP9.66□□□□□ -0.86
CTDSPL2-208ENST00000559793 PPP1R9AQ9ULJ8 1098 aa9.66□□□□□ -0.86
CTDSPL2-208ENST00000559793 MCM3APO60318 1980 aa9.65□□□□□ -0.86
CTDSPL2-208ENST00000559793 DCDC2CA8MYV0 355 aa9.65□□□□□ -0.86
CTDSPL2-208ENST00000559793 TIMP1P01033 207 aa9.65□□□□□ -0.86
CTDSPL2-208ENST00000559793 AKR1A1P14550 325 aa9.65□□□□□ -0.86
CTDSPL2-208ENST00000559793 CDK7P50613 346 aa9.65□□□□□ -0.86
CTDSPL2-208ENST00000559793 C4orf17Q53FE4 359 aa9.65□□□□□ -0.86
CTDSPL2-208ENST00000559793 HSP90AB4PQ58FF6 505 aa9.65□□□□□ -0.86
CTDSPL2-208ENST00000559793 FAM83BQ5T0W9 1011 aa9.65□□□□□ -0.86
CTDSPL2-208ENST00000559793 C16orf86Q6ZW13 317 aa9.65□□□□□ -0.86
CTDSPL2-208ENST00000559793 SIRT2Q8IXJ6 389 aa9.65□□□□□ -0.86
CTDSPL2-208ENST00000559793 CLASRPQ8N2M8 674 aaKnown RBP9.65□□□□□ -0.86
CTDSPL2-208ENST00000559793 VWA5B2Q8N398 1253 aa9.65□□□□□ -0.86
CTDSPL2-208ENST00000559793 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.65□□□□□ -0.86
CTDSPL2-208ENST00000559793 PANK1Q8TE04 598 aa9.65□□□□□ -0.86
CTDSPL2-208ENST00000559793 RHBDD1Q8TEB9 315 aa9.65□□□□□ -0.86
CTDSPL2-208ENST00000559793 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.65□□□□□ -0.861e-6■□□□□ 8.5
CTDSPL2-208ENST00000559793 BCL11AQ9H165 835 aa9.65□□□□□ -0.86
CTDSPL2-208ENST00000559793 BOLA2Q9H3K6 86 aa9.65□□□□□ -0.86
CTDSPL2-208ENST00000559793 STARD7Q9NQZ5 370 aa9.65□□□□□ -0.86
CTDSPL2-208ENST00000559793 FAM184BQ9ULE4 1060 aa9.65□□□□□ -0.86
CTDSPL2-208ENST00000559793 KIAA1024Q9UPX6 916 aa9.65□□□□□ -0.86
CTDSPL2-208ENST00000559793 RIPK3Q9Y572 518 aa9.65□□□□□ -0.86
CTDSPL2-208ENST00000559793 NCOR1O75376 2440 aa9.65□□□□□ -0.86
CTDSPL2-208ENST00000559793 SYNRGQ9UMZ2 1314 aa9.64□□□□□ -0.87
CTDSPL2-208ENST00000559793 DNAJC25-GNG10A0A024R161 153 aa9.64□□□□□ -0.87
CTDSPL2-208ENST00000559793 MYADML2A6NDP7 307 aa9.64□□□□□ -0.87
CTDSPL2-208ENST00000559793 GRXCR1A8MXD5 290 aa9.64□□□□□ -0.87
CTDSPL2-208ENST00000559793 BACH1O14867 736 aa9.64□□□□□ -0.87
CTDSPL2-208ENST00000559793 IFIT2P09913 472 aaKnown RBP9.64□□□□□ -0.87
CTDSPL2-208ENST00000559793 PHKA2P46019 1235 aa9.64□□□□□ -0.87
CTDSPL2-208ENST00000559793 TMEM240Q5SV17 173 aa9.64□□□□□ -0.87
CTDSPL2-208ENST00000559793 CTR9Q6PD62 1173 aa9.64□□□□□ -0.87
CTDSPL2-208ENST00000559793 MAMDC4Q6UXC1 1216 aa9.64□□□□□ -0.87
CTDSPL2-208ENST00000559793 SV2AQ7L0J3 742 aa9.64□□□□□ -0.87
CTDSPL2-208ENST00000559793 MSL3Q8N5Y2 521 aaKnown RBP9.64□□□□□ -0.87
CTDSPL2-208ENST00000559793 NUP133Q8WUM0 1156 aa9.64□□□□□ -0.87
CTDSPL2-208ENST00000559793 KIF1BPQ96EK5 621 aa9.64□□□□□ -0.87
CTDSPL2-208ENST00000559793 DDX11Q96FC9 970 aa9.64□□□□□ -0.87
CTDSPL2-208ENST00000559793 NUP88Q99567 741 aaPredicted RBP9.64□□□□□ -0.87
CTDSPL2-208ENST00000559793 DNAAF2Q9NVR5 837 aaKnown RBP9.64□□□□□ -0.87
CTDSPL2-208ENST00000559793 ZNF358Q9NW07 568 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms