RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 NKRFO15226 690 aaKnown RBP eCLIP9.89□□□□□ -0.83
LRRC28-215ENST00000559774 SNAI1O95863 264 aaPredicted RBP9.89□□□□□ -0.83
LRRC28-215ENST00000559774 ZSCAN22P10073 491 aaPredicted RBP9.89□□□□□ -0.83
LRRC28-215ENST00000559774 EIF2AK2P19525 551 aaKnown RBP9.89□□□□□ -0.83
LRRC28-215ENST00000559774 ICAM3P32942 547 aa9.89□□□□□ -0.83
LRRC28-215ENST00000559774 UBXN2AP68543 259 aa9.89□□□□□ -0.83
LRRC28-215ENST00000559774 SETQ01105 290 aaPredicted RBP9.89□□□□□ -0.83
LRRC28-215ENST00000559774 GUCY1B3Q02153 619 aa9.89□□□□□ -0.83
LRRC28-215ENST00000559774 Q4G0T1 1027 aa9.89□□□□□ -0.83
LRRC28-215ENST00000559774 CEP55Q53EZ4 464 aa9.89□□□□□ -0.83
LRRC28-215ENST00000559774 MAP3K21Q5TCX8 1036 aa9.89□□□□□ -0.83
LRRC28-215ENST00000559774 ATL3Q6DD88 541 aa9.89□□□□□ -0.83
LRRC28-215ENST00000559774 PIK3AP1Q6ZUJ8 805 aa9.89□□□□□ -0.83
LRRC28-215ENST00000559774 NLRX1Q86UT6 975 aa9.89□□□□□ -0.83
LRRC28-215ENST00000559774 RASGRP4Q8TDF6 673 aa9.89□□□□□ -0.83
LRRC28-215ENST00000559774 TRIB2Q92519 343 aa9.89□□□□□ -0.83
LRRC28-215ENST00000559774 MBOAT7Q96N66 472 aa9.89□□□□□ -0.83
LRRC28-215ENST00000559774 FOXD4L1Q9NU39 408 aa9.89□□□□□ -0.83
LRRC28-215ENST00000559774 TMEM260Q9NX78 707 aa9.89□□□□□ -0.83
LRRC28-215ENST00000559774 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.89□□□□□ -0.83
LRRC28-215ENST00000559774 ATP6V1DQ9Y5K8 247 aa9.89□□□□□ -0.83
LRRC28-215ENST00000559774 UBIAD1Q9Y5Z9 338 aa9.89□□□□□ -0.83
LRRC28-215ENST00000559774 VPS37CA5D8V6 355 aaPredicted RBP9.88□□□□□ -0.83
LRRC28-215ENST00000559774 ADAMTS3O15072 1205 aa9.88□□□□□ -0.83
LRRC28-215ENST00000559774 TBX3O15119 743 aa9.88□□□□□ -0.83
LRRC28-215ENST00000559774 FIBPO43427 364 aa9.88□□□□□ -0.83
LRRC28-215ENST00000559774 MSCO60682 206 aa9.88□□□□□ -0.83
LRRC28-215ENST00000559774 DTNBO60941 627 aa9.88□□□□□ -0.83
LRRC28-215ENST00000559774 BRD1O95696 1058 aa9.88□□□□□ -0.83
LRRC28-215ENST00000559774 BMP15O95972 392 aa9.88□□□□□ -0.83
LRRC28-215ENST00000559774 MRPS9P82933 396 aaKnown RBP9.88□□□□□ -0.83
LRRC28-215ENST00000559774 ACVR2BQ13705 512 aa9.88□□□□□ -0.83
LRRC28-215ENST00000559774 INF2Q27J81 1249 aa9.88□□□□□ -0.83
LRRC28-215ENST00000559774 MCTP1Q6DN14 999 aa9.88□□□□□ -0.83
LRRC28-215ENST00000559774 IQSEC1Q6DN90 963 aa9.88□□□□□ -0.83
LRRC28-215ENST00000559774 SPRYD3Q8NCJ5 442 aa9.88□□□□□ -0.83
LRRC28-215ENST00000559774 GIMAP8Q8ND71 665 aaPredicted RBP9.88□□□□□ -0.83
LRRC28-215ENST00000559774 SCFD2Q8WU76 684 aa9.88□□□□□ -0.83
LRRC28-215ENST00000559774 PURBQ96QR8 312 aaKnown RBP9.88□□□□□ -0.83
LRRC28-215ENST00000559774 SENP7Q9BQF6 1050 aa9.88□□□□□ -0.83
LRRC28-215ENST00000559774 MXRA8Q9BRK3 442 aa9.88□□□□□ -0.83
LRRC28-215ENST00000559774 KATNBL1Q9H079 304 aa9.88□□□□□ -0.83
LRRC28-215ENST00000559774 JADE2Q9NQC1 790 aa9.88□□□□□ -0.83
LRRC28-215ENST00000559774 FLRT1Q9NZU1 646 aa9.88□□□□□ -0.83
LRRC28-215ENST00000559774 Q9Y3F1 56 aa9.88□□□□□ -0.83
LRRC28-215ENST00000559774 PTCH2Q9Y6C5 1203 aa9.88□□□□□ -0.83
LRRC28-215ENST00000559774 MORC2Q9Y6X9 1032 aaPredicted RBP9.88□□□□□ -0.83
LRRC28-215ENST00000559774 MYH6P13533 1939 aa9.88□□□□□ -0.83
LRRC28-215ENST00000559774 CASP8AP2Q9UKL3 1982 aa9.87□□□□□ -0.83
LRRC28-215ENST00000559774 SPATA31C2B4DYI2 1134 aa9.87□□□□□ -0.83
LRRC28-215ENST00000559774 KIF28PB7ZC32 967 aa9.87□□□□□ -0.83
LRRC28-215ENST00000559774 LAD1O00515 517 aa9.87□□□□□ -0.83
LRRC28-215ENST00000559774 SEPT4O43236 478 aa9.87□□□□□ -0.83
LRRC28-215ENST00000559774 ZNF865P0CJ78 1059 aaPredicted RBP9.87□□□□□ -0.83
LRRC28-215ENST00000559774 MYCLP12524 364 aaPredicted RBP9.87□□□□□ -0.83
LRRC28-215ENST00000559774 CYBAP13498 195 aa9.87□□□□□ -0.83
LRRC28-215ENST00000559774 CYP2C19P33261 490 aa9.87□□□□□ -0.83
LRRC28-215ENST00000559774 ZNF76P36508 570 aa9.87□□□□□ -0.83
LRRC28-215ENST00000559774 FOSBP53539 338 aa9.87□□□□□ -0.83
LRRC28-215ENST00000559774 CACNB2Q08289 660 aaPredicted RBP9.87□□□□□ -0.83
LRRC28-215ENST00000559774 RESTQ13127 1097 aa9.87□□□□□ -0.83
LRRC28-215ENST00000559774 TTLL4Q14679 1199 aa9.87□□□□□ -0.83
LRRC28-215ENST00000559774 CCL14Q16627 93 aa9.87□□□□□ -0.83
LRRC28-215ENST00000559774 SLC9C1Q4G0N8 1177 aa9.87□□□□□ -0.83
LRRC28-215ENST00000559774 EARS2Q5JPH6 523 aaKnown RBP9.87□□□□□ -0.83
LRRC28-215ENST00000559774 MYSM1Q5VVJ2 828 aa9.87□□□□□ -0.83
LRRC28-215ENST00000559774 TAPT1Q6NXT6 567 aa9.87□□□□□ -0.83
LRRC28-215ENST00000559774 ARMC5Q96C12 935 aa9.87□□□□□ -0.83
LRRC28-215ENST00000559774 FAM20AQ96MK3 541 aa9.87□□□□□ -0.83
LRRC28-215ENST00000559774 FAM184BQ9ULE4 1060 aa9.87□□□□□ -0.83
LRRC28-215ENST00000559774 RBBP6Q7Z6E9 1792 aaKnown RBP9.87□□□□□ -0.83
LRRC28-215ENST00000559774 PLXNB2O15031 1838 aa9.86□□□□□ -0.83
LRRC28-215ENST00000559774 IGLV3-22A0A075B6J6 115 aa9.86□□□□□ -0.83
LRRC28-215ENST00000559774 FAM86B1E9PN63 330 aa9.86□□□□□ -0.83
LRRC28-215ENST00000559774 MGAMO43451 1857 aa9.86□□□□□ -0.83
LRRC28-215ENST00000559774 EDIL3O43854 480 aa9.86□□□□□ -0.83
LRRC28-215ENST00000559774 RGS20O76081 388 aa9.86□□□□□ -0.83
LRRC28-215ENST00000559774 ECM2O94769 699 aaPredicted RBP9.86□□□□□ -0.83
LRRC28-215ENST00000559774 F13A1P00488 732 aa9.86□□□□□ -0.83
LRRC28-215ENST00000559774 INHAP05111 366 aa9.86□□□□□ -0.83
LRRC28-215ENST00000559774 FAM86B2P0C5J1 330 aa9.86□□□□□ -0.83
LRRC28-215ENST00000559774 AKR1A1P14550 325 aa9.86□□□□□ -0.83
LRRC28-215ENST00000559774 ELNP15502 786 aa9.86□□□□□ -0.83
LRRC28-215ENST00000559774 ITGB5P18084 799 aa9.86□□□□□ -0.83
LRRC28-215ENST00000559774 NKX3-2P78367 333 aa9.86□□□□□ -0.83
LRRC28-215ENST00000559774 MTMR1Q13613 665 aa9.86□□□□□ -0.83
LRRC28-215ENST00000559774 NEDD9Q14511 834 aa9.86□□□□□ -0.83
LRRC28-215ENST00000559774 LETM2Q2VYF4 491 aa9.86□□□□□ -0.83
LRRC28-215ENST00000559774 DUSP28Q4G0W2 176 aa9.86□□□□□ -0.83
LRRC28-215ENST00000559774 CCDC62Q6P9F0 684 aa9.86□□□□□ -0.83
LRRC28-215ENST00000559774 SLFN12Q8IYM2 578 aa9.86□□□□□ -0.83
LRRC28-215ENST00000559774 IL31RAQ8NI17 732 aa9.86□□□□□ -0.83
LRRC28-215ENST00000559774 PGBD1Q96JS3 809 aa9.86□□□□□ -0.83
LRRC28-215ENST00000559774 ZNF396Q96N95 335 aaPredicted RBP9.86□□□□□ -0.83
LRRC28-215ENST00000559774 RIT2Q99578 217 aa9.86□□□□□ -0.83
LRRC28-215ENST00000559774 HMX1Q9NP08 348 aaPredicted RBP9.86□□□□□ -0.83
LRRC28-215ENST00000559774 KCNH7Q9NS40 1196 aa9.86□□□□□ -0.83
LRRC28-215ENST00000559774 TBC1D22BQ9NU19 505 aa9.86□□□□□ -0.83
LRRC28-215ENST00000559774 CHMP5Q9NZZ3 219 aa9.86□□□□□ -0.83
LRRC28-215ENST00000559774 CEP131Q9UPN4 1083 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms