RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.71□□□□□ -0.37
TRAF3-207ENST00000559734 C7orf31Q8N865 590 aa12.71□□□□□ -0.37
TRAF3-207ENST00000559734 CLEC4DQ8WXI8 215 aa12.71□□□□□ -0.37
TRAF3-207ENST00000559734 ANKS1AQ92625 1134 aa12.71□□□□□ -0.37
TRAF3-207ENST00000559734 MRPL38Q96DV4 380 aaKnown RBP12.71□□□□□ -0.37
TRAF3-207ENST00000559734 CTAGE1Q96RT6 745 aa12.71□□□□□ -0.37
TRAF3-207ENST00000559734 HDAC6Q9UBN7 1215 aa12.71□□□□□ -0.37
TRAF3-207ENST00000559734 CTNNA3Q9UI47 895 aa12.71□□□□□ -0.37
TRAF3-207ENST00000559734 FAM50BQ9Y247 325 aa12.71□□□□□ -0.37
TRAF3-207ENST00000559734 SIP14410 1827 aa12.7□□□□□ -0.38
TRAF3-207ENST00000559734 AMHP03971 560 aa12.7□□□□□ -0.38
TRAF3-207ENST00000559734 CASTP20810 708 aaKnown RBP12.7□□□□□ -0.38
TRAF3-207ENST00000559734 EDNRBP24530 442 aa12.7□□□□□ -0.38
TRAF3-207ENST00000559734 USH1GQ495M9 461 aa12.7□□□□□ -0.38
TRAF3-207ENST00000559734 TCEAL5Q5H9L2 206 aa12.7□□□□□ -0.38
TRAF3-207ENST00000559734 RRP12Q5JTH9 1297 aaKnown RBP12.7□□□□□ -0.38
TRAF3-207ENST00000559734 HFE2Q6ZVN8 426 aa12.7□□□□□ -0.38
TRAF3-207ENST00000559734 SESTD1Q86VW0 696 aa12.7□□□□□ -0.38
TRAF3-207ENST00000559734 BANK1Q8NDB2 785 aa12.7□□□□□ -0.38
TRAF3-207ENST00000559734 NEK9Q8TD19 979 aa12.7□□□□□ -0.38
TRAF3-207ENST00000559734 FSD1Q9BTV5 496 aa12.7□□□□□ -0.38
TRAF3-207ENST00000559734 CLDND1Q9NY35 253 aa12.7□□□□□ -0.38
TRAF3-207ENST00000559734 GTF2IRD1Q9UHL9 959 aa12.7□□□□□ -0.38
TRAF3-207ENST00000559734 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.7□□□□□ -0.38
TRAF3-207ENST00000559734 INSL6Q9Y581 213 aa12.7□□□□□ -0.38
TRAF3-207ENST00000559734 PIEZO1Q92508 2521 aa12.69□□□□□ -0.38
TRAF3-207ENST00000559734 TRANK1O15050 2925 aa12.69□□□□□ -0.38
TRAF3-207ENST00000559734 LGR5O75473 907 aa12.69□□□□□ -0.38
TRAF3-207ENST00000559734 CSPG5O95196 566 aa12.69□□□□□ -0.38
TRAF3-207ENST00000559734 ZNF286BP0CG31 522 aa12.69□□□□□ -0.38
TRAF3-207ENST00000559734 PSEN2P49810 448 aa12.69□□□□□ -0.38
TRAF3-207ENST00000559734 ZP2Q05996 745 aa12.69□□□□□ -0.38
TRAF3-207ENST00000559734 GPM6BQ13491 265 aa12.69□□□□□ -0.38
TRAF3-207ENST00000559734 CLUL1Q15846 466 aa12.69□□□□□ -0.38
TRAF3-207ENST00000559734 EPC2Q52LR7 807 aa12.69□□□□□ -0.38
TRAF3-207ENST00000559734 ZNF618Q5T7W0 954 aa12.69□□□□□ -0.38
TRAF3-207ENST00000559734 MIER1Q8N108 512 aa12.69□□□□□ -0.38
TRAF3-207ENST00000559734 DNERQ8NFT8 737 aa12.69□□□□□ -0.38
TRAF3-207ENST00000559734 KAT2BQ92831 832 aa12.69□□□□□ -0.38
TRAF3-207ENST00000559734 YME1L1Q96TA2 773 aa12.69□□□□□ -0.38
TRAF3-207ENST00000559734 KCNH6Q9H252 994 aa12.69□□□□□ -0.38
TRAF3-207ENST00000559734 TRIP12Q14669 1992 aaPredicted RBP12.69□□□□□ -0.38
TRAF3-207ENST00000559734 BRWD1Q9NSI6 2320 aa12.68□□□□□ -0.38
TRAF3-207ENST00000559734 POTEB3A0JP26 581 aa12.68□□□□□ -0.38
TRAF3-207ENST00000559734 UPP2O95045 317 aa12.68□□□□□ -0.38
TRAF3-207ENST00000559734 ZNF200P98182 395 aaPredicted RBP12.68□□□□□ -0.38
TRAF3-207ENST00000559734 C1QBPQ07021 282 aaKnown RBP12.68□□□□□ -0.38
TRAF3-207ENST00000559734 ARHGAP1Q07960 439 aa12.68□□□□□ -0.38
TRAF3-207ENST00000559734 RBL2Q08999 1139 aa12.68□□□□□ -0.38
TRAF3-207ENST00000559734 PTK7Q13308 1070 aa12.68□□□□□ -0.38
TRAF3-207ENST00000559734 MFSD10Q14728 455 aa12.68□□□□□ -0.38
TRAF3-207ENST00000559734 DGKDQ16760 1214 aa12.68□□□□□ -0.38
TRAF3-207ENST00000559734 DIEXFQ68CQ4 756 aaKnown RBP12.68□□□□□ -0.38
TRAF3-207ENST00000559734 POTEBQ6S5H4 581 aa12.68□□□□□ -0.38
TRAF3-207ENST00000559734 BTNL9Q6UXG8 535 aa12.68□□□□□ -0.38
TRAF3-207ENST00000559734 DHX37Q8IY37 1157 aaKnown RBP12.68□□□□□ -0.38
TRAF3-207ENST00000559734 WNT8BQ93098 351 aa12.68□□□□□ -0.38
TRAF3-207ENST00000559734 PABPC5Q96DU9 382 aaKnown RBP12.68□□□□□ -0.38
TRAF3-207ENST00000559734 MFSD14AQ96MC6 490 aa12.68□□□□□ -0.38
TRAF3-207ENST00000559734 PHOX2BQ99453 314 aa12.68□□□□□ -0.38
TRAF3-207ENST00000559734 KATNAL1Q9BW62 490 aa12.68□□□□□ -0.38
TRAF3-207ENST00000559734 UPF3BQ9BZI7 483 aaKnown RBP12.68□□□□□ -0.38
TRAF3-207ENST00000559734 MUTYHQ9UIF7 546 aa12.68□□□□□ -0.38
TRAF3-207ENST00000559734 SORBS3O60504 671 aa12.67□□□□□ -0.38
TRAF3-207ENST00000559734 TOP1P11387 765 aaKnown RBP12.67□□□□□ -0.38
TRAF3-207ENST00000559734 IRS1P35568 1242 aa12.67□□□□□ -0.38
TRAF3-207ENST00000559734 THPOP40225 353 aa12.67□□□□□ -0.38
TRAF3-207ENST00000559734 MBTPS1Q14703 1052 aa12.67□□□□□ -0.38
TRAF3-207ENST00000559734 KIAA0753Q2KHM9 967 aa12.67□□□□□ -0.38
TRAF3-207ENST00000559734 CCDC62Q6P9F0 684 aa12.67□□□□□ -0.38
TRAF3-207ENST00000559734 RPAINQ86UA6 219 aa12.67□□□□□ -0.38
TRAF3-207ENST00000559734 ADHFE1Q8IWW8 467 aa12.67□□□□□ -0.38
TRAF3-207ENST00000559734 DBF4BQ8NFT6 615 aa12.67□□□□□ -0.38
TRAF3-207ENST00000559734 SAMD11Q96NU1 681 aa12.67□□□□□ -0.38
TRAF3-207ENST00000559734 TMEM47Q9BQJ4 181 aa12.67□□□□□ -0.38
TRAF3-207ENST00000559734 CHMP4BQ9H444 224 aaKnown RBP12.67□□□□□ -0.38
TRAF3-207ENST00000559734 NSUN3Q9H649 340 aaKnown RBP12.67□□□□□ -0.38
TRAF3-207ENST00000559734 PRKAG3Q9UGI9 489 aa12.67□□□□□ -0.38
TRAF3-207ENST00000559734 PNMA2Q9UL42 364 aa12.67□□□□□ -0.38
TRAF3-207ENST00000559734 PDHBP11177 359 aa12.66□□□□□ -0.38
TRAF3-207ENST00000559734 HTRA4P83105 476 aaPredicted RBP12.66□□□□□ -0.38
TRAF3-207ENST00000559734 TRIM71Q2Q1W2 868 aaKnown RBP12.66□□□□□ -0.38
TRAF3-207ENST00000559734 ZMYM1Q5SVZ6 1142 aa12.66□□□□□ -0.38
TRAF3-207ENST00000559734 TRAF7Q6Q0C0 670 aa12.66□□□□□ -0.38
TRAF3-207ENST00000559734 TMEM192Q8IY95 271 aa12.66□□□□□ -0.38
TRAF3-207ENST00000559734 TAAR1Q96RJ0 339 aa12.66□□□□□ -0.38
TRAF3-207ENST00000559734 EMSYQ7Z589 1322 aa12.65□□□□□ -0.38
TRAF3-207ENST00000559734 WDR19Q8NEZ3 1342 aa12.65□□□□□ -0.38
TRAF3-207ENST00000559734 C19orf67A6NJJ6 358 aa12.65□□□□□ -0.38
TRAF3-207ENST00000559734 RSPH10B2B2RC85 870 aa12.65□□□□□ -0.38
TRAF3-207ENST00000559734 H3BNC9 293 aa12.65□□□□□ -0.38
TRAF3-207ENST00000559734 RSPH10BP0C881 870 aa12.65□□□□□ -0.38
TRAF3-207ENST00000559734 ZNF543Q08ER8 600 aa12.65□□□□□ -0.38
TRAF3-207ENST00000559734 STXBP2Q15833 593 aa12.65□□□□□ -0.38
TRAF3-207ENST00000559734 FBXO11Q86XK2 927 aa12.65□□□□□ -0.38
TRAF3-207ENST00000559734 SP7Q8TDD2 431 aaPredicted RBP12.65□□□□□ -0.38
TRAF3-207ENST00000559734 CPVLQ9H3G5 476 aa12.65□□□□□ -0.38
TRAF3-207ENST00000559734 MRVI1Q9Y6F6 885 aa12.65□□□□□ -0.38
TRAF3-207ENST00000559734 ORC4O43929 436 aa12.64□□□□□ -0.39
TRAF3-207ENST00000559734 F2P00734 622 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms