RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 ERVK-9P63128 1117 aa19.6■□□□□ 0.73
CHRNA3-206ENST00000559658 ERVK-24P63145 666 aa19.6■□□□□ 0.73
CHRNA3-206ENST00000559658 FSTL1Q12841 308 aa19.6■□□□□ 0.73
CHRNA3-206ENST00000559658 PGM5Q15124 567 aa19.6■□□□□ 0.73
CHRNA3-206ENST00000559658 TKFCQ3LXA3 575 aa19.6■□□□□ 0.73
CHRNA3-206ENST00000559658 Q4G0T1 1027 aa19.6■□□□□ 0.73
CHRNA3-206ENST00000559658 MOXD1Q6UVY6 613 aa19.6■□□□□ 0.73
CHRNA3-206ENST00000559658 PXMP2Q9NR77 195 aa19.6■□□□□ 0.73
CHRNA3-206ENST00000559658 RABGAP1Q9Y3P9 1069 aa19.6■□□□□ 0.73
CHRNA3-206ENST00000559658 KINO60870 393 aaKnown RBP19.6■□□□□ 0.73
CHRNA3-206ENST00000559658 GRM1Q13255 1194 aa19.6■□□□□ 0.73
CHRNA3-206ENST00000559658 KARSQ15046 597 aaKnown RBP19.6■□□□□ 0.73
CHRNA3-206ENST00000559658 GRAMD1CQ8IYS0 662 aa19.6■□□□□ 0.73
CHRNA3-206ENST00000559658 CHST13Q8NET6 341 aa19.6■□□□□ 0.73
CHRNA3-206ENST00000559658 SYAP1Q96A49 352 aaPredicted RBP19.6■□□□□ 0.73
CHRNA3-206ENST00000559658 PDCD2LQ9BRP1 358 aa19.6■□□□□ 0.73
CHRNA3-206ENST00000559658 TNMDQ9H2S6 317 aa19.6■□□□□ 0.73
CHRNA3-206ENST00000559658 TTC12Q9H892 705 aaPredicted RBP19.6■□□□□ 0.73
CHRNA3-206ENST00000559658 PNMA3Q9UL41 463 aa19.6■□□□□ 0.73
CHRNA3-206ENST00000559658 PLXNB2O15031 1838 aa19.6■□□□□ 0.73
CHRNA3-206ENST00000559658 ZNF76P36508 570 aa19.59■□□□□ 0.73
CHRNA3-206ENST00000559658 LONP1P36776 959 aaKnown RBP19.59■□□□□ 0.73
CHRNA3-206ENST00000559658 TEX2Q8IWB9 1127 aa19.59■□□□□ 0.73
CHRNA3-206ENST00000559658 IGSF22Q8N9C0 903 aa19.59■□□□□ 0.73
CHRNA3-206ENST00000559658 DHX58Q96C10 678 aa19.59■□□□□ 0.73
CHRNA3-206ENST00000559658 PLIN2Q99541 437 aa19.59■□□□□ 0.73
CHRNA3-206ENST00000559658 MMTAG2Q9BU76 263 aaKnown RBP19.59■□□□□ 0.73
CHRNA3-206ENST00000559658 EFCC1Q9HA90 598 aa19.59■□□□□ 0.73
CHRNA3-206ENST00000559658 FAM13BQ9NYF5 915 aa19.59■□□□□ 0.73
CHRNA3-206ENST00000559658 SLC45A1Q9Y2W3 748 aa19.59■□□□□ 0.73
CHRNA3-206ENST00000559658 TESPA1A2RU30 521 aaPredicted RBP19.58■□□□□ 0.73
CHRNA3-206ENST00000559658 TMEM88BA6NKF7 163 aa19.58■□□□□ 0.73
CHRNA3-206ENST00000559658 ARP10275 920 aa19.58■□□□□ 0.73
CHRNA3-206ENST00000559658 ANKRD35Q8N283 1001 aa19.58■□□□□ 0.73
CHRNA3-206ENST00000559658 NUDT12Q9BQG2 462 aa19.58■□□□□ 0.73
CHRNA3-206ENST00000559658 SERTAD1Q9UHV2 236 aa19.58■□□□□ 0.73
CHRNA3-206ENST00000559658 KIAA1217Q5T5P2 1943 aa19.58■□□□□ 0.73
CHRNA3-206ENST00000559658 DOCK5Q9H7D0 1870 aa19.58■□□□□ 0.72
CHRNA3-206ENST00000559658 ACTN4O43707 911 aaKnown RBP19.58■□□□□ 0.72
CHRNA3-206ENST00000559658 PGK2P07205 417 aa19.58■□□□□ 0.72
CHRNA3-206ENST00000559658 MYCLP12524 364 aaPredicted RBP19.58■□□□□ 0.72
CHRNA3-206ENST00000559658 YY1P25490 414 aa19.58■□□□□ 0.72
CHRNA3-206ENST00000559658 FXR2P51116 673 aaKnown RBP eCLIP19.58■□□□□ 0.72
CHRNA3-206ENST00000559658 CEP55Q53EZ4 464 aa19.58■□□□□ 0.72
CHRNA3-206ENST00000559658 WDR11Q9BZH6 1224 aa19.58■□□□□ 0.72
CHRNA3-206ENST00000559658 MAP3K20Q9NYL2 800 aaKnown RBP19.58■□□□□ 0.72
CHRNA3-206ENST00000559658 PKD2L1Q9P0L9 805 aa19.58■□□□□ 0.72
CHRNA3-206ENST00000559658 ZNFX1Q9P2E3 1918 aaKnown RBP19.57■□□□□ 0.72
CHRNA3-206ENST00000559658 ZNF445P59923 1031 aa19.57■□□□□ 0.72
CHRNA3-206ENST00000559658 SPIRE1Q08AE8 756 aa19.57■□□□□ 0.72
CHRNA3-206ENST00000559658 ZRSR1Q15695 479 aaKnown RBP19.57■□□□□ 0.72
CHRNA3-206ENST00000559658 WDR78Q5VTH9 848 aa19.57■□□□□ 0.72
CHRNA3-206ENST00000559658 ARHGEF16Q5VV41 709 aa19.57■□□□□ 0.72
CHRNA3-206ENST00000559658 PCNX4Q63HM2 1172 aa19.57■□□□□ 0.72
CHRNA3-206ENST00000559658 CYP4F22Q6NT55 531 aa19.57■□□□□ 0.72
CHRNA3-206ENST00000559658 RBM43Q6ZSC3 357 aaKnown RBP19.57■□□□□ 0.72
CHRNA3-206ENST00000559658 PLA2G4DQ86XP0 818 aa19.57■□□□□ 0.72
CHRNA3-206ENST00000559658 EHMT1Q9H9B1 1298 aa19.57■□□□□ 0.72
CHRNA3-206ENST00000559658 ECM2O94769 699 aaPredicted RBP19.56■□□□□ 0.72
CHRNA3-206ENST00000559658 PRR29P0C7W0 189 aa19.56■□□□□ 0.72
CHRNA3-206ENST00000559658 E2F4Q16254 413 aa19.56■□□□□ 0.72
CHRNA3-206ENST00000559658 KRBA2Q6ZNG9 492 aa19.56■□□□□ 0.72
CHRNA3-206ENST00000559658 FGD4Q96M96 766 aa19.56■□□□□ 0.72
CHRNA3-206ENST00000559658 NAP1L4Q99733 375 aaKnown RBP19.56■□□□□ 0.72
CHRNA3-206ENST00000559658 ADGRA2Q96PE1 1338 aa19.56■□□□□ 0.72
CHRNA3-206ENST00000559658 MCM3APO60318 1980 aa19.56■□□□□ 0.72
CHRNA3-206ENST00000559658 MEIS1O00470 390 aa19.56■□□□□ 0.72
CHRNA3-206ENST00000559658 CASP1P29466 404 aa19.56■□□□□ 0.72
CHRNA3-206ENST00000559658 PAXIP1Q6ZW49 1069 aaPredicted RBP19.56■□□□□ 0.72
CHRNA3-206ENST00000559658 SAMD3Q8N6K7 520 aa19.56■□□□□ 0.72
CHRNA3-206ENST00000559658 PARK7Q99497 189 aaKnown RBP19.56■□□□□ 0.72
CHRNA3-206ENST00000559658 MXRA8Q9BRK3 442 aa19.56■□□□□ 0.72
CHRNA3-206ENST00000559658 FUCA2Q9BTY2 467 aa19.56■□□□□ 0.72
CHRNA3-206ENST00000559658 VAV3Q9UKW4 847 aa19.56■□□□□ 0.72
CHRNA3-206ENST00000559658 UBIAD1Q9Y5Z9 338 aa19.56■□□□□ 0.72
CHRNA3-206ENST00000559658 SOWAHBA6NEL2 793 aa19.55■□□□□ 0.72
CHRNA3-206ENST00000559658 MARCH6O60337 910 aa19.55■□□□□ 0.72
CHRNA3-206ENST00000559658 PNOCQ13519 176 aa19.55■□□□□ 0.72
CHRNA3-206ENST00000559658 GSE1Q14687 1217 aa19.55■□□□□ 0.72
CHRNA3-206ENST00000559658 NAALADL2Q58DX5 795 aa19.55■□□□□ 0.72
CHRNA3-206ENST00000559658 STAMQ92783 540 aa19.55■□□□□ 0.72
CHRNA3-206ENST00000559658 LRWD1Q9UFC0 647 aa19.55■□□□□ 0.72
CHRNA3-206ENST00000559658 CPA4Q9UI42 421 aa19.55■□□□□ 0.72
CHRNA3-206ENST00000559658 PCDHA12Q9UN75 941 aa19.55■□□□□ 0.72
CHRNA3-206ENST00000559658 MANSC4A6NHS7 340 aaPredicted RBP19.54■□□□□ 0.72
CHRNA3-206ENST00000559658 RGS20O76081 388 aa19.54■□□□□ 0.72
CHRNA3-206ENST00000559658 SLC25A27O95847 323 aa19.54■□□□□ 0.72
CHRNA3-206ENST00000559658 NR3C2P08235 984 aa19.54■□□□□ 0.72
CHRNA3-206ENST00000559658 ECM1Q16610 540 aa19.54■□□□□ 0.72
CHRNA3-206ENST00000559658 CABP7Q86V35 215 aa19.54■□□□□ 0.72
CHRNA3-206ENST00000559658 GPRC5AQ8NFJ5 357 aa19.54■□□□□ 0.72
CHRNA3-206ENST00000559658 SDF4Q9BRK5 362 aa19.54■□□□□ 0.72
CHRNA3-206ENST00000559658 FBXO40Q9UH90 709 aa19.54■□□□□ 0.72
CHRNA3-206ENST00000559658 PFASO15067 1338 aa19.54■□□□□ 0.72
CHRNA3-206ENST00000559658 TMEM266Q2M3C6 531 aa19.54■□□□□ 0.72
CHRNA3-206ENST00000559658 PDXDC2PQ6P474 469 aa19.54■□□□□ 0.72
CHRNA3-206ENST00000559658 LRSAM1Q6UWE0 723 aa19.54■□□□□ 0.72
CHRNA3-206ENST00000559658 IFNL1Q8IU54 200 aa19.54■□□□□ 0.72
CHRNA3-206ENST00000559658 FAM133AQ8N9E0 248 aa19.54■□□□□ 0.72
CHRNA3-206ENST00000559658 CNNM3Q8NE01 707 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms