RNA–Protein interactions for RNA: ENST00000559573.3

FAM227B-208, Transcript of family with sequence similarity 227 member B, human

TSL 3

Gene FAM227B, Length 2,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM227B-208	ENST00000559573	CHD7	Q9P2D1	2997 aa		11.61	□□□□□ -0.55
FAM227B-208	ENST00000559573	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.61	□□□□□ -0.55
FAM227B-208	ENST00000559573	ESPN	B1AK53	854 aa		11.6	□□□□□ -0.55
FAM227B-208	ENST00000559573	FARP2	O94887	1054 aa	Predicted RBP	11.6	□□□□□ -0.55
FAM227B-208	ENST00000559573	IFNAR1	P17181	557 aa		11.6	□□□□□ -0.55
FAM227B-208	ENST00000559573	COPB2	P35606	906 aa		11.6	□□□□□ -0.55
FAM227B-208	ENST00000559573	LRRC41	Q15345	812 aa		11.6	□□□□□ -0.55
FAM227B-208	ENST00000559573	GTF3C6	Q969F1	213 aa		11.6	□□□□□ -0.55
FAM227B-208	ENST00000559573	ABHD16B	Q9H3Z7	469 aa		11.6	□□□□□ -0.55
FAM227B-208	ENST00000559573	PCDHA6	Q9UN73	950 aa		11.6	□□□□□ -0.55
FAM227B-208	ENST00000559573	PCDHA8	Q9Y5H6	950 aa		11.6	□□□□□ -0.55
FAM227B-208	ENST00000559573	LRRC37A2	A6NM11	1700 aa		11.6	□□□□□ -0.55
FAM227B-208	ENST00000559573	TRIOBP	Q9H2D6	2365 aa		11.6	□□□□□ -0.55
FAM227B-208	ENST00000559573	UNC80	Q8N2C7	3258 aa		11.6	□□□□□ -0.55
FAM227B-208	ENST00000559573	CTAGE5	O15320	804 aa		11.6	□□□□□ -0.55
FAM227B-208	ENST00000559573	PRPF3	O43395	683 aa	Known RBP	11.6	□□□□□ -0.55
FAM227B-208	ENST00000559573	ATP9A	O75110	1047 aa		11.6	□□□□□ -0.55
FAM227B-208	ENST00000559573	RARB	P10826	455 aa		11.6	□□□□□ -0.55
FAM227B-208	ENST00000559573	RBM10	P98175	930 aa	Known RBP	11.6	□□□□□ -0.55
FAM227B-208	ENST00000559573	KCNA10	Q16322	511 aa		11.6	□□□□□ -0.55
FAM227B-208	ENST00000559573	CXCL17	Q6UXB2	119 aa		11.6	□□□□□ -0.55
FAM227B-208	ENST00000559573	MCF2L2	Q86YR7	1114 aa		11.6	□□□□□ -0.55
FAM227B-208	ENST00000559573	NSUN7	Q8NE18	718 aa	Known RBP	11.6	□□□□□ -0.55
FAM227B-208	ENST00000559573	NSUN6	Q8TEA1	469 aa	Known RBP	11.6	□□□□□ -0.55
FAM227B-208	ENST00000559573	LZTS2	Q9BRK4	669 aa		11.6	□□□□□ -0.55
FAM227B-208	ENST00000559573	CRISPLD2	Q9H0B8	497 aa		11.6	□□□□□ -0.55
FAM227B-208	ENST00000559573	UPF2	Q9HAU5	1272 aa	Known RBP	11.6	□□□□□ -0.55
FAM227B-208	ENST00000559573	ORC3	Q9UBD5	711 aa	Predicted RBP	11.6	□□□□□ -0.55
FAM227B-208	ENST00000559573	DIS3	Q9Y2L1	958 aa	Known RBP	11.6	□□□□□ -0.55
FAM227B-208	ENST00000559573	SYNGAP1	Q96PV0	1343 aa		11.6	□□□□□ -0.55
FAM227B-208	ENST00000559573	ALPK3	Q96L96	1907 aa		11.6	□□□□□ -0.55
FAM227B-208	ENST00000559573	TXN	P10599	105 aa	Known RBP	11.59	□□□□□ -0.55
FAM227B-208	ENST00000559573	AKR1A1	P14550	325 aa		11.59	□□□□□ -0.55
FAM227B-208	ENST00000559573	AKAP17A	Q02040	695 aa	Known RBP	11.59	□□□□□ -0.55
FAM227B-208	ENST00000559573	NR5A1	Q13285	461 aa		11.59	□□□□□ -0.55
FAM227B-208	ENST00000559573	GNAS	Q5JWF2	1037 aa		11.59	□□□□□ -0.55
FAM227B-208	ENST00000559573	TLK2	Q86UE8	772 aa		11.59	□□□□□ -0.55
FAM227B-208	ENST00000559573	DPF3	Q92784	378 aa		11.59	□□□□□ -0.55
FAM227B-208	ENST00000559573	ADD3	Q9UEY8	706 aa	Known RBP	11.59	□□□□□ -0.55
FAM227B-208	ENST00000559573	LIMCH1	Q9UPQ0	1083 aa		11.59	□□□□□ -0.55
FAM227B-208	ENST00000559573	CCDC196	A0A1B0GTZ2	297 aa		11.59	□□□□□ -0.55
FAM227B-208	ENST00000559573	ASB14	A6NK59	587 aa		11.59	□□□□□ -0.55
FAM227B-208	ENST00000559573	WNT7A	O00755	349 aa		11.59	□□□□□ -0.55
FAM227B-208	ENST00000559573	EDIL3	O43854	480 aa		11.59	□□□□□ -0.55
FAM227B-208	ENST00000559573	ITGB5	P18084	799 aa		11.59	□□□□□ -0.55
FAM227B-208	ENST00000559573	EDNRB	P24530	442 aa		11.59	□□□□□ -0.55
FAM227B-208	ENST00000559573	ADCY7	P51828	1080 aa		11.59	□□□□□ -0.55
FAM227B-208	ENST00000559573	NLRP5	P59047	1200 aa		11.59	□□□□□ -0.55
FAM227B-208	ENST00000559573	SEMA3F	Q13275	785 aa		11.59	□□□□□ -0.55
FAM227B-208	ENST00000559573	NPY5R	Q15761	445 aa		11.59	□□□□□ -0.55
FAM227B-208	ENST00000559573	LRRC26	Q2I0M4	334 aa		11.59	□□□□□ -0.55
FAM227B-208	ENST00000559573	VTI1A	Q96AJ9	217 aa		11.59	□□□□□ -0.55
FAM227B-208	ENST00000559573	OGDHL	Q9ULD0	1010 aa		11.59	□□□□□ -0.55
FAM227B-208	ENST00000559573	FAM184B	Q9ULE4	1060 aa		11.59	□□□□□ -0.55
FAM227B-208	ENST00000559573	DDX39A	O00148	427 aa	Known RBP	11.58	□□□□□ -0.56
FAM227B-208	ENST00000559573	ADAMTS4	O75173	837 aa		11.58	□□□□□ -0.56
FAM227B-208	ENST00000559573	CUL5	Q93034	780 aa		11.58	□□□□□ -0.56
FAM227B-208	ENST00000559573	TMX3	Q96JJ7	454 aa		11.58	□□□□□ -0.56
FAM227B-208	ENST00000559573	PANK2	Q9BZ23	570 aa		11.58	□□□□□ -0.56
FAM227B-208	ENST00000559573	GNE	Q9Y223	722 aa	Known RBP	11.58	□□□□□ -0.56
FAM227B-208	ENST00000559573	ASGR1	P07306	291 aa		11.58	□□□□□ -0.56
FAM227B-208	ENST00000559573	ZNF286B	P0CG31	522 aa		11.58	□□□□□ -0.56
FAM227B-208	ENST00000559573	MLLT1	Q03111	559 aa	Predicted RBP	11.58	□□□□□ -0.56
FAM227B-208	ENST00000559573	STXBP2	Q15833	593 aa		11.58	□□□□□ -0.56
FAM227B-208	ENST00000559573	HSDL1	Q3SXM5	330 aa		11.58	□□□□□ -0.56
FAM227B-208	ENST00000559573	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.58	□□□□□ -0.56
FAM227B-208	ENST00000559573	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.58	□□□□□ -0.56
FAM227B-208	ENST00000559573	VSIG10L	Q86VR7	867 aa		11.58	□□□□□ -0.56
FAM227B-208	ENST00000559573	AFG1L	Q8WV93	481 aa		11.58	□□□□□ -0.56
FAM227B-208	ENST00000559573	IL17RA	Q96F46	866 aa		11.58	□□□□□ -0.56
FAM227B-208	ENST00000559573	ALG1	Q9BT22	464 aa		11.58	□□□□□ -0.56
FAM227B-208	ENST00000559573	RNF26	Q9BY78	433 aa	Predicted RBP	11.58	□□□□□ -0.56
FAM227B-208	ENST00000559573	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	11.58	□□□□□ -0.56
FAM227B-208	ENST00000559573	MRVI1	Q9Y6F6	885 aa		11.58	□□□□□ -0.56
FAM227B-208	ENST00000559573	SPDYE3	A6NKU9	549 aa		11.57	□□□□□ -0.56
FAM227B-208	ENST00000559573	FAM86B1	E9PN63	330 aa		11.57	□□□□□ -0.56
FAM227B-208	ENST00000559573	FAM86B2	P0C5J1	330 aa		11.57	□□□□□ -0.56
FAM227B-208	ENST00000559573	AR	P10275	920 aa		11.57	□□□□□ -0.56
FAM227B-208	ENST00000559573	ATP2B1	P20020	1258 aa		11.57	□□□□□ -0.56
FAM227B-208	ENST00000559573	SMARCA1	P28370	1054 aa		11.57	□□□□□ -0.56
FAM227B-208	ENST00000559573	CYFIP1	Q7L576	1253 aa		11.57	□□□□□ -0.56
FAM227B-208	ENST00000559573	UBE2Q1	Q7Z7E8	422 aa		11.57	□□□□□ -0.56
FAM227B-208	ENST00000559573	TRIM50	Q86XT4	487 aa		11.57	□□□□□ -0.56
FAM227B-208	ENST00000559573	TRMT44	Q8IYL2	757 aa	Known RBP	11.57	□□□□□ -0.56
FAM227B-208	ENST00000559573	TRIM22	Q8IYM9	498 aa		11.57	□□□□□ -0.56
FAM227B-208	ENST00000559573	DNER	Q8NFT8	737 aa		11.57	□□□□□ -0.56
FAM227B-208	ENST00000559573	ZBTB10	Q96DT7	871 aa		11.57	□□□□□ -0.56
FAM227B-208	ENST00000559573	ANO3	Q9BYT9	981 aa		11.57	□□□□□ -0.56
FAM227B-208	ENST00000559573	RIC8A	Q9NPQ8	531 aa		11.57	□□□□□ -0.56
FAM227B-208	ENST00000559573	NID2	Q14112	1375 aa		11.57	□□□□□ -0.56
FAM227B-208	ENST00000559573	PPP2R5B	Q15173	497 aa		11.56	□□□□□ -0.56
FAM227B-208	ENST00000559573	C7orf61	Q8IZ16	206 aa		11.56	□□□□□ -0.56
FAM227B-208	ENST00000559573	OR6J1	Q8NGC5	347 aa		11.56	□□□□□ -0.56
FAM227B-208	ENST00000559573	ATP11B	Q9Y2G3	1177 aa		11.56	□□□□□ -0.56
FAM227B-208	ENST00000559573	MYL3	P08590	195 aa		11.56	□□□□□ -0.56
FAM227B-208	ENST00000559573	UBA1	P22314	1058 aa	Known RBP	11.56	□□□□□ -0.56
FAM227B-208	ENST00000559573	CLK2	P49760	499 aa	Known RBP	11.56	□□□□□ -0.56
FAM227B-208	ENST00000559573	RABEP1	Q15276	862 aa		11.56	□□□□□ -0.56
FAM227B-208	ENST00000559573	ANKRD1	Q15327	319 aa		11.56	□□□□□ -0.56
FAM227B-208	ENST00000559573	CCDC62	Q6P9F0	684 aa		11.56	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms