RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 GHRHRQ02643 423 aa9.44□□□□□ -0.9
SNX1-207ENST00000559401 APOBRQ0VD83 1088 aa9.44□□□□□ -0.9
SNX1-207ENST00000559401 ITGA7Q13683 1181 aa9.44□□□□□ -0.9
SNX1-207ENST00000559401 PGM5Q15124 567 aa9.44□□□□□ -0.9
SNX1-207ENST00000559401 USP17L6PQ6QN14 398 aa9.44□□□□□ -0.9
SNX1-207ENST00000559401 Q6ZUG5 572 aa9.44□□□□□ -0.9
SNX1-207ENST00000559401 ANKRD33Q7Z3H0 272 aa9.44□□□□□ -0.9
SNX1-207ENST00000559401 IL31RAQ8NI17 732 aa9.44□□□□□ -0.9
SNX1-207ENST00000559401 GPKOWQ92917 476 aaPredicted RBP eCLIP9.44□□□□□ -0.9
SNX1-207ENST00000559401 TOX2Q96NM4 488 aa9.44□□□□□ -0.9
SNX1-207ENST00000559401 PPP1R12CQ9BZL4 782 aa9.44□□□□□ -0.9
SNX1-207ENST00000559401 CNTNAP5Q8WYK1 1306 aa9.44□□□□□ -0.9
SNX1-207ENST00000559401 KIAA0355O15063 1070 aa9.43□□□□□ -0.9
SNX1-207ENST00000559401 SLC34A2O95436 690 aa9.43□□□□□ -0.9
SNX1-207ENST00000559401 RPS6KB1P23443 525 aa9.43□□□□□ -0.9
SNX1-207ENST00000559401 NAPAP54920 295 aa9.43□□□□□ -0.9
SNX1-207ENST00000559401 PURAQ00577 322 aaKnown RBP9.43□□□□□ -0.9
SNX1-207ENST00000559401 FPGSQ05932 587 aa9.43□□□□□ -0.9
SNX1-207ENST00000559401 FAAP100Q0VG06 881 aa9.43□□□□□ -0.9
SNX1-207ENST00000559401 FAM126BQ8IXS8 530 aa9.43□□□□□ -0.9
SNX1-207ENST00000559401 DHX37Q8IY37 1157 aaKnown RBP9.43□□□□□ -0.9
SNX1-207ENST00000559401 PPP1R13LQ8WUF5 828 aa9.43□□□□□ -0.9
SNX1-207ENST00000559401 AFG1LQ8WV93 481 aa9.43□□□□□ -0.9
SNX1-207ENST00000559401 KCNB2Q92953 911 aa9.43□□□□□ -0.9
SNX1-207ENST00000559401 MTG1Q9BT17 334 aaPredicted RBP9.43□□□□□ -0.9
SNX1-207ENST00000559401 PSTPIP2Q9H939 334 aa9.43□□□□□ -0.9
SNX1-207ENST00000559401 DOCK5Q9H7D0 1870 aa9.42□□□□□ -0.9
SNX1-207ENST00000559401 CCDC196A0A1B0GTZ2 297 aa9.42□□□□□ -0.9
SNX1-207ENST00000559401 A6NJR5 290 aa9.42□□□□□ -0.9
SNX1-207ENST00000559401 SPDYE3A6NKU9 549 aa9.42□□□□□ -0.9
SNX1-207ENST00000559401 KPNA6O60684 536 aa9.42□□□□□ -0.9
SNX1-207ENST00000559401 GGPS1O95749 300 aa9.42□□□□□ -0.9
SNX1-207ENST00000559401 MMP3P08254 477 aa9.42□□□□□ -0.9
SNX1-207ENST00000559401 CDK7P50613 346 aa9.42□□□□□ -0.9
SNX1-207ENST00000559401 ARHGAP1Q07960 439 aa9.42□□□□□ -0.9
SNX1-207ENST00000559401 UBE2SQ16763 222 aa9.42□□□□□ -0.9
SNX1-207ENST00000559401 GNPTABQ3T906 1256 aa9.42□□□□□ -0.9
SNX1-207ENST00000559401 WWC2Q6AWC2 1192 aa9.42□□□□□ -0.9
SNX1-207ENST00000559401 CCDC62Q6P9F0 684 aa9.42□□□□□ -0.9
SNX1-207ENST00000559401 KCNV1Q6PIU1 500 aa9.42□□□□□ -0.9
SNX1-207ENST00000559401 VSIG10LQ86VR7 867 aa9.42□□□□□ -0.9
SNX1-207ENST00000559401 LRCH3Q96II8 777 aa9.42□□□□□ -0.9
SNX1-207ENST00000559401 TRPV6Q9H1D0 765 aa9.42□□□□□ -0.9
SNX1-207ENST00000559401 EHMT1Q9H9B1 1298 aa9.42□□□□□ -0.9
SNX1-207ENST00000559401 RTEL1Q9NZ71 1219 aa9.42□□□□□ -0.9
SNX1-207ENST00000559401 DDX41Q9UJV9 622 aaKnown RBP9.42□□□□□ -0.9
SNX1-207ENST00000559401 TBX21Q9UL17 535 aa9.42□□□□□ -0.9
SNX1-207ENST00000559401 NOD1Q9Y239 953 aa9.42□□□□□ -0.9
SNX1-207ENST00000559401 CYP46A1Q9Y6A2 500 aa9.42□□□□□ -0.9
SNX1-207ENST00000559401 V9GY48 417 aaPredicted RBP9.42□□□□□ -0.9
SNX1-207ENST00000559401 GRIN2DO15399 1336 aa9.41□□□□□ -0.9
SNX1-207ENST00000559401 SOX1O00570 391 aaPredicted RBP9.41□□□□□ -0.9
SNX1-207ENST00000559401 MEIS2O14770 477 aa9.41□□□□□ -0.9
SNX1-207ENST00000559401 EPB41L2O43491 1005 aaKnown RBP9.41□□□□□ -0.9
SNX1-207ENST00000559401 B4GALT4O60513 344 aa9.41□□□□□ -0.9
SNX1-207ENST00000559401 RGS20O76081 388 aa9.41□□□□□ -0.9
SNX1-207ENST00000559401 TIMP1P01033 207 aa9.41□□□□□ -0.9
SNX1-207ENST00000559401 UBA1P22314 1058 aaKnown RBP9.41□□□□□ -0.9
SNX1-207ENST00000559401 ITGB8P26012 769 aa9.41□□□□□ -0.9
SNX1-207ENST00000559401 CDC27P30260 824 aa9.41□□□□□ -0.9
SNX1-207ENST00000559401 CYP2C18P33260 490 aa9.41□□□□□ -0.9
SNX1-207ENST00000559401 ADD1P35611 737 aaKnown RBP9.41□□□□□ -0.9
SNX1-207ENST00000559401 ADCY7P51828 1080 aa9.41□□□□□ -0.9
SNX1-207ENST00000559401 RCAN1P53805 252 aa9.41□□□□□ -0.9
SNX1-207ENST00000559401 AKAP17AQ02040 695 aaKnown RBP9.41□□□□□ -0.9
SNX1-207ENST00000559401 LAMC2Q13753 1193 aa9.41□□□□□ -0.9
SNX1-207ENST00000559401 DGKDQ16760 1214 aa9.41□□□□□ -0.9
SNX1-207ENST00000559401 NBPF20Q3BBV1 942 aa9.41□□□□□ -0.9
SNX1-207ENST00000559401 C9orf50Q5SZB4 431 aa9.41□□□□□ -0.9
SNX1-207ENST00000559401 RUFY3Q7L099 469 aa9.41□□□□□ -0.9
SNX1-207ENST00000559401 NLRX1Q86UT6 975 aa9.41□□□□□ -0.9
SNX1-207ENST00000559401 TMEM199Q8N511 208 aa9.41□□□□□ -0.9
SNX1-207ENST00000559401 USP26Q9BXU7 913 aa9.41□□□□□ -0.9
SNX1-207ENST00000559401 SEZ6LQ9BYH1 1024 aa9.41□□□□□ -0.9
SNX1-207ENST00000559401 UPF3BQ9BZI7 483 aaKnown RBP9.41□□□□□ -0.9
SNX1-207ENST00000559401 ALDH8A1Q9H2A2 487 aaPredicted RBP9.41□□□□□ -0.9
SNX1-207ENST00000559401 HIPK3Q9H422 1215 aa9.41□□□□□ -0.9
SNX1-207ENST00000559401 MLXIPQ9HAP2 919 aa9.41□□□□□ -0.9
SNX1-207ENST00000559401 SCN10AQ9Y5Y9 1956 aa9.41□□□□□ -0.9
SNX1-207ENST00000559401 FRMPD4Q14CM0 1322 aa9.4□□□□□ -0.9
SNX1-207ENST00000559401 hCG_1984214I3L0E3 225 aa9.4□□□□□ -0.9
SNX1-207ENST00000559401 PIK3CDO00329 1044 aa9.4□□□□□ -0.9
SNX1-207ENST00000559401 NOP56O00567 594 aaKnown RBP9.4□□□□□ -0.9
SNX1-207ENST00000559401 PPFIA3O75145 1194 aa9.4□□□□□ -0.9
SNX1-207ENST00000559401 STAM2O75886 525 aa9.4□□□□□ -0.9
SNX1-207ENST00000559401 CD4P01730 458 aa9.4□□□□□ -0.9
SNX1-207ENST00000559401 SUPT20HL2P0C7V6 817 aa9.4□□□□□ -0.9
SNX1-207ENST00000559401 ZNF286BP0CG31 522 aa9.4□□□□□ -0.9
SNX1-207ENST00000559401 CCT2P78371 535 aaKnown RBP9.4□□□□□ -0.9
SNX1-207ENST00000559401 MRPS9P82933 396 aaKnown RBP9.4□□□□□ -0.9
SNX1-207ENST00000559401 SP4Q02446 784 aa9.4□□□□□ -0.9
SNX1-207ENST00000559401 PPIGQ13427 754 aaKnown RBP eCLIP9.4□□□□□ -0.95e-7■□□□□ 10.4
SNX1-207ENST00000559401 SHHQ15465 462 aa9.4□□□□□ -0.9
SNX1-207ENST00000559401 MFSD5Q6N075 450 aa9.4□□□□□ -0.9
SNX1-207ENST00000559401 PPP1R18Q6NYC8 613 aa9.4□□□□□ -0.9
SNX1-207ENST00000559401 ZNF713Q8N859 430 aaPredicted RBP9.4□□□□□ -0.9
SNX1-207ENST00000559401 SLC43A3Q8NBI5 491 aa9.4□□□□□ -0.9
SNX1-207ENST00000559401 PGBD1Q96JS3 809 aa9.4□□□□□ -0.9
SNX1-207ENST00000559401 RNPC3Q96LT9 517 aaKnown RBP9.4□□□□□ -0.9
SNX1-207ENST00000559401 SPATA33Q96N06 139 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms