RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 DYNC1LI2O43237 492 aaPredicted RBP21.49■■□□□ 1.03
CASC4-209ENST00000559222 ATN1P54259 1190 aaPredicted RBP21.49■■□□□ 1.03
CASC4-209ENST00000559222 SSRP1Q08945 709 aaKnown RBP21.49■■□□□ 1.03
CASC4-209ENST00000559222 LY6KQ17RY6 165 aa21.49■■□□□ 1.03
CASC4-209ENST00000559222 CCDC62Q6P9F0 684 aa21.49■■□□□ 1.03
CASC4-209ENST00000559222 ZNF713Q8N859 430 aaPredicted RBP21.49■■□□□ 1.03
CASC4-209ENST00000559222 GTF3C6Q969F1 213 aa21.49■■□□□ 1.03
CASC4-209ENST00000559222 MPHOSPH6Q99547 160 aaKnown RBP21.49■■□□□ 1.03
CASC4-209ENST00000559222 PCDHA6Q9UN73 950 aa21.49■■□□□ 1.03
CASC4-209ENST00000559222 PCDHA8Q9Y5H6 950 aa21.49■■□□□ 1.03
CASC4-209ENST00000559222 SORBS3O60504 671 aa21.48■■□□□ 1.03
CASC4-209ENST00000559222 CD2BP2O95400 341 aaKnown RBP21.48■■□□□ 1.03
CASC4-209ENST00000559222 TXNP10599 105 aaKnown RBP21.48■■□□□ 1.03
CASC4-209ENST00000559222 CAPN2P17655 700 aa21.48■■□□□ 1.03
CASC4-209ENST00000559222 CCND2P30279 289 aa21.48■■□□□ 1.03
CASC4-209ENST00000559222 CLK2P49760 499 aaKnown RBP21.48■■□□□ 1.03
CASC4-209ENST00000559222 KCNA10Q16322 511 aa21.48■■□□□ 1.03
CASC4-209ENST00000559222 RNF180Q86T96 592 aa21.48■■□□□ 1.03
CASC4-209ENST00000559222 RASGRP4Q8TDF6 673 aa21.48■■□□□ 1.03
CASC4-209ENST00000559222 SCFD2Q8WU76 684 aa21.48■■□□□ 1.03
CASC4-209ENST00000559222 GJB4Q9NTQ9 266 aa21.48■■□□□ 1.03
CASC4-209ENST00000559222 RTEL1Q9NZ71 1219 aa21.48■■□□□ 1.03
CASC4-209ENST00000559222 PHF24Q9UPV7 400 aa21.48■■□□□ 1.03
CASC4-209ENST00000559222 A0A1W2PQ45 241 aaPredicted RBP21.47■■□□□ 1.03
CASC4-209ENST00000559222 A0A1W2PQY0 241 aa21.47■■□□□ 1.03
CASC4-209ENST00000559222 B4DLN1 442 aa21.47■■□□□ 1.03
CASC4-209ENST00000559222 EIF3JO75822 258 aaKnown RBP21.47■■□□□ 1.03
CASC4-209ENST00000559222 CST5P28325 142 aaPredicted RBP21.47■■□□□ 1.03
CASC4-209ENST00000559222 MRPL12P52815 198 aaKnown RBP21.47■■□□□ 1.03
CASC4-209ENST00000559222 NKX3-2P78367 333 aa21.47■■□□□ 1.03
CASC4-209ENST00000559222 AKAP17AQ02040 695 aaKnown RBP21.47■■□□□ 1.03
CASC4-209ENST00000559222 SEMA3FQ13275 785 aa21.47■■□□□ 1.03
CASC4-209ENST00000559222 OR6J1Q8NGC5 347 aa21.47■■□□□ 1.03
CASC4-209ENST00000559222 BCAS3Q9H6U6 928 aa21.47■■□□□ 1.03
CASC4-209ENST00000559222 ESYT2A0FGR8 921 aa21.46■■□□□ 1.03
CASC4-209ENST00000559222 JAK2O60674 1132 aa21.46■■□□□ 1.03
CASC4-209ENST00000559222 ACLYP53396 1101 aa21.46■■□□□ 1.03
CASC4-209ENST00000559222 SP2Q02086 613 aa21.46■■□□□ 1.03
CASC4-209ENST00000559222 GNASQ5JWF2 1037 aa21.46■■□□□ 1.03
CASC4-209ENST00000559222 JAKMIP3Q5VZ66 844 aa21.46■■□□□ 1.03
CASC4-209ENST00000559222 ANO3Q9BYT9 981 aa21.46■■□□□ 1.03
CASC4-209ENST00000559222 ZMYND12Q9H0C1 365 aa21.46■■□□□ 1.03
CASC4-209ENST00000559222 RBM27Q9P2N5 1060 aaKnown RBP21.46■■□□□ 1.03
CASC4-209ENST00000559222 DEXIO95424 95 aa21.45■■□□□ 1.02
CASC4-209ENST00000559222 ASGR1P07306 291 aa21.45■■□□□ 1.02
CASC4-209ENST00000559222 FDPSP14324 419 aaKnown RBP21.45■■□□□ 1.02
CASC4-209ENST00000559222 ARHGAP1Q07960 439 aa21.45■■□□□ 1.02
CASC4-209ENST00000559222 TTLL4Q14679 1199 aa21.45■■□□□ 1.02
CASC4-209ENST00000559222 NPY5RQ15761 445 aa21.45■■□□□ 1.02
CASC4-209ENST00000559222 FSCN1Q16658 493 aaKnown RBP21.45■■□□□ 1.02
CASC4-209ENST00000559222 PCNX4Q63HM2 1172 aa21.45■■□□□ 1.02
CASC4-209ENST00000559222 TRIM22Q8IYM9 498 aa21.45■■□□□ 1.02
CASC4-209ENST00000559222 NSUN7Q8NE18 718 aaKnown RBP21.45■■□□□ 1.02
CASC4-209ENST00000559222 DPF3Q92784 378 aa21.45■■□□□ 1.02
CASC4-209ENST00000559222 AP5M1Q9H0R1 490 aa21.45■■□□□ 1.02
CASC4-209ENST00000559222 DDX41Q9UJV9 622 aaKnown RBP21.45■■□□□ 1.02
CASC4-209ENST00000559222 MRVI1Q9Y6F6 885 aa21.45■■□□□ 1.02
CASC4-209ENST00000559222 STK36Q9NRP7 1315 aa21.45■■□□□ 1.02
CASC4-209ENST00000559222 DNAH12Q6ZR08 3092 aa21.44■■□□□ 1.02
CASC4-209ENST00000559222 SPDYE3A6NKU9 549 aa21.44■■□□□ 1.02
CASC4-209ENST00000559222 RABEP1Q15276 862 aa21.44■■□□□ 1.02
CASC4-209ENST00000559222 CCDC83Q8IWF9 413 aa21.44■■□□□ 1.02
CASC4-209ENST00000559222 C7orf61Q8IZ16 206 aa21.44■■□□□ 1.02
CASC4-209ENST00000559222 INPP4AQ96PE3 977 aaPredicted RBP21.44■■□□□ 1.02
CASC4-209ENST00000559222 HTATIP2Q9BUP3 242 aa21.44■■□□□ 1.02
CASC4-209ENST00000559222 UPF2Q9HAU5 1272 aaKnown RBP21.44■■□□□ 1.02
CASC4-209ENST00000559222 Q9Y3F1 56 aa21.44■■□□□ 1.02
CASC4-209ENST00000559222 TELO2Q9Y4R8 837 aa21.44■■□□□ 1.02
CASC4-209ENST00000559222 UBA1P22314 1058 aaKnown RBP21.43■■□□□ 1.02
CASC4-209ENST00000559222 RTP1P59025 263 aa21.43■■□□□ 1.02
CASC4-209ENST00000559222 CPLX2Q6PUV4 134 aaKnown RBP21.43■■□□□ 1.02
CASC4-209ENST00000559222 CXCL17Q6UXB2 119 aa21.43■■□□□ 1.02
CASC4-209ENST00000559222 SLC39A5Q6ZMH5 540 aa21.43■■□□□ 1.02
CASC4-209ENST00000559222 PPP1R13LQ8WUF5 828 aa21.43■■□□□ 1.02
CASC4-209ENST00000559222 TSEN34Q9BSV6 310 aaKnown RBP21.43■■□□□ 1.02
CASC4-209ENST00000559222 SPC25Q9HBM1 224 aa21.43■■□□□ 1.02
CASC4-209ENST00000559222 KCNJ14Q9UNX9 436 aa21.43■■□□□ 1.02
CASC4-209ENST00000559222 LIMCH1Q9UPQ0 1083 aa21.43■■□□□ 1.02
CASC4-209ENST00000559222 ITGB5P18084 799 aa21.42■■□□□ 1.02
CASC4-209ENST00000559222 FOSBP53539 338 aa21.42■■□□□ 1.02
CASC4-209ENST00000559222 TRIM60Q495X7 471 aa21.42■■□□□ 1.02
CASC4-209ENST00000559222 CYP2W1Q8TAV3 490 aa21.42■■□□□ 1.02
CASC4-209ENST00000559222 AFG1LQ8WV93 481 aa21.42■■□□□ 1.02
CASC4-209ENST00000559222 C6orf50Q9HD87 102 aa21.42■■□□□ 1.02
CASC4-209ENST00000559222 ORC3Q9UBD5 711 aaPredicted RBP21.42■■□□□ 1.02
CASC4-209ENST00000559222 LTBP2Q14767 1821 aa21.41■■□□□ 1.02
CASC4-209ENST00000559222 MOXD2PA6NHM9 499 aa21.41■■□□□ 1.02
CASC4-209ENST00000559222 NKRFO15226 690 aaKnown RBP eCLIP21.41■■□□□ 1.02
CASC4-209ENST00000559222 CDKL5O76039 1030 aa21.41■■□□□ 1.02
CASC4-209ENST00000559222 GH1P01241 217 aa21.41■■□□□ 1.02
CASC4-209ENST00000559222 NLRP5P59047 1200 aa21.41■■□□□ 1.02
CASC4-209ENST00000559222 PSMC6P62333 389 aa21.41■■□□□ 1.02
CASC4-209ENST00000559222 SNX17Q15036 470 aa21.41■■□□□ 1.02
CASC4-209ENST00000559222 CCDC148Q8NFR7 591 aa21.41■■□□□ 1.02
CASC4-209ENST00000559222 SH3GLB2Q9NR46 395 aa21.41■■□□□ 1.02
CASC4-209ENST00000559222 UBIAD1Q9Y5Z9 338 aa21.41■■□□□ 1.02
CASC4-209ENST00000559222 SCN10AQ9Y5Y9 1956 aa21.41■■□□□ 1.02
CASC4-209ENST00000559222 GRIN2DO15399 1336 aa21.4■■□□□ 1.02
CASC4-209ENST00000559222 SPATA31C2B4DYI2 1134 aa21.4■■□□□ 1.02
CASC4-209ENST00000559222 H0YGN5 161 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms