RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 SDSP20132 328 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 CCND1P24385 295 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 CCT5P48643 541 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 MCTP2Q6DN12 878 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 SYDE1Q6ZW31 735 aaPredicted RBP6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 ALKBH8Q96BT7 664 aaKnown RBP6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 CLUHP3Q96NS8 147 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 SDF4Q9BRK5 362 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 RSAD1Q9HA92 442 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 NCOA5Q9HCD5 579 aaKnown RBP6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 PNMA8BQ9ULN7 279 aaPredicted RBP6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 LRRFIP2Q9Y608 721 aaKnown RBP6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 UQCRHLA0A096LP55 91 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 UQCRHP07919 91 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 NPTX2P47972 431 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 AK2P54819 239 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 SLC12A2P55011 1212 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 DBN1Q16643 649 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 PKN3Q6P5Z2 889 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 FASTKD5Q7L8L6 764 aaKnown RBP6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 IL17REQ8NFR9 667 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 ANKRD24Q8TF21 1146 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 TBC1D22AQ8WUA7 517 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 TBCBQ99426 244 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 SMOC1Q9H4F8 434 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 TISP43B9A030 160 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 B9A039 149 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 ALAS1P13196 640 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 IRX1P78414 480 aaPredicted RBP6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 AP3B2Q13367 1082 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 KIF4BQ2VIQ3 1234 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 METTL24Q5JXM2 366 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 CCDC149Q6ZUS6 474 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 ARMC9Q7Z3E5 817 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 USP6NLQ92738 828 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 UNKQ9C0B0 810 aaKnown RBP6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 TBC1D22BQ9NU19 505 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 STIM2Q9P246 746 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 BLOC1S6Q9UL45 172 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 PCDHGB5Q9Y5G0 923 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 KIAA1551Q9HCM1 1747 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 RIMS2Q9UQ26 1411 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 ANO9A1A5B4 782 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 GUCA1CO95843 209 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 DESP17661 470 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 KIF11P52732 1056 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 PPP2R3AQ06190 1150 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 CCDC178Q5BJE1 867 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 HHATQ5VTY9 493 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 THOC1Q96FV9 657 aaKnown RBP6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 PPM1MQ96MI6 270 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 MRPL9Q9BYD2 267 aaKnown RBP6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 DDX21Q9NR30 783 aaKnown RBP eCLIP6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 SPTLC2O15270 562 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 SASH1O94885 1247 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 CCNFP41002 786 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 INHBEP58166 350 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 COX10Q12887 443 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 PCBP1Q15365 356 aaKnown RBP eCLIP6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 SHROOM1Q2M3G4 852 aaPredicted RBP6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 FOXB2Q5VYV0 432 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 PCNX4Q63HM2 1172 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 MRM1Q6IN84 353 aaKnown RBP6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 TRIM42Q8IWZ5 723 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 EDEM1Q92611 657 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 PGAP2Q9UHJ9 254 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 TRIM17Q9Y577 477 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 PCDHGA11Q9Y5H2 935 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 NCAM2O15394 837 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 RPL17P18621 184 aaKnown RBP6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 GABREP78334 506 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 KCNC4Q03721 635 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 SEZ6Q53EL9 994 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 PLBD1Q6P4A8 553 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 ERC1Q8IUD2 1116 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 MAP4K3Q8IVH8 894 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 PLD6Q8N2A8 252 aaKnown RBP6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 NKAIN3Q8N8D7 197 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 PLD4Q96BZ4 506 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 CDCA7LQ96GN5 454 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 CRACR2AQ9BSW2 395 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 PDLIM7Q9NR12 457 aa6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 HERC5Q9UII4 1024 aaKnown RBP6.48□□□□□ -1.37
CTDSPL2-206ENST00000559175 A0A0B4J203 849 aa6.47□□□□□ -1.37
CTDSPL2-206ENST00000559175 BRINP1O60477 761 aa6.47□□□□□ -1.37
CTDSPL2-206ENST00000559175 TBX18O95935 607 aa6.47□□□□□ -1.37
CTDSPL2-206ENST00000559175 PARP1P09874 1014 aaKnown RBP6.47□□□□□ -1.37
CTDSPL2-206ENST00000559175 MCM4P33991 863 aa6.47□□□□□ -1.37
CTDSPL2-206ENST00000559175 RDXP35241 583 aaKnown RBP6.47□□□□□ -1.37
CTDSPL2-206ENST00000559175 IREB2P48200 963 aaKnown RBP6.47□□□□□ -1.37
CTDSPL2-206ENST00000559175 SEMA3AQ14563 771 aa6.47□□□□□ -1.37
CTDSPL2-206ENST00000559175 KIF22Q14807 665 aa6.47□□□□□ -1.37
CTDSPL2-206ENST00000559175 TAF5Q15542 800 aa6.47□□□□□ -1.37
CTDSPL2-206ENST00000559175 COX20Q5RI15 118 aa6.47□□□□□ -1.37
CTDSPL2-206ENST00000559175 RETSATQ6NUM9 610 aa6.47□□□□□ -1.37
CTDSPL2-206ENST00000559175 FIP1L1Q6UN15 594 aaKnown RBP6.47□□□□□ -1.37
CTDSPL2-206ENST00000559175 NRSN1Q8IZ57 195 aa6.47□□□□□ -1.37
CTDSPL2-206ENST00000559175 ANKRD20A12PQ8NF67 263 aa6.47□□□□□ -1.37
CTDSPL2-206ENST00000559175 CCDC138Q96M89 665 aa6.47□□□□□ -1.37
CTDSPL2-206ENST00000559175 DLEC1Q9Y238 1755 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms