RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 C9orf50Q5SZB4 431 aa20.32■□□□□ 0.84
SMAD3-210ENST00000559092 NFRKBQ6P4R8 1299 aa20.32■□□□□ 0.84
SMAD3-210ENST00000559092 TMTC3Q6ZXV5 915 aa20.32■□□□□ 0.84
SMAD3-210ENST00000559092 FCHSD1Q86WN1 690 aa20.32■□□□□ 0.84
SMAD3-210ENST00000559092 TMEM199Q8N511 208 aa20.32■□□□□ 0.84
SMAD3-210ENST00000559092 ALDH8A1Q9H2A2 487 aaPredicted RBP20.32■□□□□ 0.84
SMAD3-210ENST00000559092 RBM28Q9NW13 759 aaKnown RBP20.32■□□□□ 0.84
SMAD3-210ENST00000559092 MRVI1Q9Y6F6 885 aa20.32■□□□□ 0.84
SMAD3-210ENST00000559092 EPB41L2O43491 1005 aaKnown RBP20.31■□□□□ 0.84
SMAD3-210ENST00000559092 MYCLP12524 364 aaPredicted RBP20.31■□□□□ 0.84
SMAD3-210ENST00000559092 RXRAP19793 462 aa20.31■□□□□ 0.84
SMAD3-210ENST00000559092 HSPA4P34932 840 aa20.31■□□□□ 0.84
SMAD3-210ENST00000559092 PTPN11Q06124 597 aaPredicted RBP20.31■□□□□ 0.84
SMAD3-210ENST00000559092 PPIGQ13427 754 aaKnown RBP eCLIP20.31■□□□□ 0.842e-7■■■□□ 15.7
SMAD3-210ENST00000559092 APOA5Q6Q788 366 aa20.31■□□□□ 0.84
SMAD3-210ENST00000559092 AFG1LQ8WV93 481 aa20.31■□□□□ 0.84
SMAD3-210ENST00000559092 CUL5Q93034 780 aa20.31■□□□□ 0.84
SMAD3-210ENST00000559092 TRPV6Q9H1D0 765 aa20.31■□□□□ 0.84
SMAD3-210ENST00000559092 FRMPD4Q14CM0 1322 aa20.3■□□□□ 0.84
SMAD3-210ENST00000559092 B4GALT4O60513 344 aa20.3■□□□□ 0.84
SMAD3-210ENST00000559092 RGS20O76081 388 aa20.3■□□□□ 0.84
SMAD3-210ENST00000559092 CASTP20810 708 aaKnown RBP20.3■□□□□ 0.84
SMAD3-210ENST00000559092 RCAN1P53805 252 aa20.3■□□□□ 0.84
SMAD3-210ENST00000559092 EPHB4P54760 987 aa20.3■□□□□ 0.84
SMAD3-210ENST00000559092 NBPF20Q3BBV1 942 aa20.3■□□□□ 0.84
SMAD3-210ENST00000559092 FAM109BQ6ICB4 259 aaPredicted RBP20.3■□□□□ 0.84
SMAD3-210ENST00000559092 XRRA1Q6P2D8 792 aa20.3■□□□□ 0.84
SMAD3-210ENST00000559092 MICU3Q86XE3 530 aa20.3■□□□□ 0.84
SMAD3-210ENST00000559092 HIPK3Q9H422 1215 aa20.3■□□□□ 0.84
SMAD3-210ENST00000559092 ZBTB43O43298 467 aa20.29■□□□□ 0.84
SMAD3-210ENST00000559092 MMP3P08254 477 aa20.29■□□□□ 0.84
SMAD3-210ENST00000559092 DGKDQ16760 1214 aa20.29■□□□□ 0.84
SMAD3-210ENST00000559092 TEX2Q8IWB9 1127 aa20.29■□□□□ 0.84
SMAD3-210ENST00000559092 DHX37Q8IY37 1157 aaKnown RBP20.29■□□□□ 0.84
SMAD3-210ENST00000559092 CMTR1Q8N1G2 835 aaKnown RBP20.29■□□□□ 0.84
SMAD3-210ENST00000559092 PPTC7Q8NI37 304 aa20.29■□□□□ 0.84
SMAD3-210ENST00000559092 SMARCC2Q8TAQ2 1214 aa20.29■□□□□ 0.84
SMAD3-210ENST00000559092 PSTPIP2Q9H939 334 aa20.29■□□□□ 0.84
SMAD3-210ENST00000559092 PPP4R2Q9NY27 417 aa20.29■□□□□ 0.84
SMAD3-210ENST00000559092 LAMA2P24043 3122 aaKnown RBP20.28■□□□□ 0.84
SMAD3-210ENST00000559092 MEIS2O14770 477 aa20.28■□□□□ 0.84
SMAD3-210ENST00000559092 PPFIA4O75335 1185 aa20.28■□□□□ 0.84
SMAD3-210ENST00000559092 SMAD3P84022 425 aaKnown RBP20.28■□□□□ 0.84
SMAD3-210ENST00000559092 GNPTABQ3T906 1256 aa20.28■□□□□ 0.84
SMAD3-210ENST00000559092 FBXL16Q8N461 479 aa20.28■□□□□ 0.84
SMAD3-210ENST00000559092 DEFB123Q8N688 67 aa20.28■□□□□ 0.84
SMAD3-210ENST00000559092 IL31RAQ8NI17 732 aa20.28■□□□□ 0.84
SMAD3-210ENST00000559092 RNPC3Q96LT9 517 aaKnown RBP20.28■□□□□ 0.84
SMAD3-210ENST00000559092 NOC4LQ9BVI4 516 aaKnown RBP20.28■□□□□ 0.84
SMAD3-210ENST00000559092 PPP1R12CQ9BZL4 782 aa20.28■□□□□ 0.84
SMAD3-210ENST00000559092 BRPF3Q9ULD4 1205 aa20.28■□□□□ 0.84
SMAD3-210ENST00000559092 LTBP2Q14767 1821 aa20.27■□□□□ 0.84
SMAD3-210ENST00000559092 CSF2RAP15509 400 aa20.27■□□□□ 0.84
SMAD3-210ENST00000559092 ICAM3P32942 547 aa20.27■□□□□ 0.84
SMAD3-210ENST00000559092 CYP2C18P33260 490 aa20.27■□□□□ 0.84
SMAD3-210ENST00000559092 RTN1Q16799 776 aa20.27■□□□□ 0.84
SMAD3-210ENST00000559092 CELF3Q5SZQ8 465 aaKnown RBP20.27■□□□□ 0.84
SMAD3-210ENST00000559092 MYSM1Q5VVJ2 828 aa20.27■□□□□ 0.84
SMAD3-210ENST00000559092 USP17L6PQ6QN14 398 aa20.27■□□□□ 0.84
SMAD3-210ENST00000559092 RAB11FIP4Q86YS3 637 aa20.27■□□□□ 0.84
SMAD3-210ENST00000559092 CCDC82Q8N4S0 544 aa20.27■□□□□ 0.84
SMAD3-210ENST00000559092 TCEANC2Q96MN5 208 aa20.27■□□□□ 0.84
SMAD3-210ENST00000559092 SNX14Q9Y5W7 946 aa20.27■□□□□ 0.84
SMAD3-210ENST00000559092 HOXD8P13378 290 aaPredicted RBP20.26■□□□□ 0.83
SMAD3-210ENST00000559092 MRPS9P82933 396 aaKnown RBP20.26■□□□□ 0.83
SMAD3-210ENST00000559092 FGD1P98174 961 aa20.26■□□□□ 0.83
SMAD3-210ENST00000559092 FAM47CQ5HY64 1035 aa20.26■□□□□ 0.83
SMAD3-210ENST00000559092 PSRC1Q6PGN9 363 aaPredicted RBP20.26■□□□□ 0.83
SMAD3-210ENST00000559092 C16orf59Q7L2K0 433 aa20.26■□□□□ 0.83
SMAD3-210ENST00000559092 SESTD1Q86VW0 696 aa20.26■□□□□ 0.83
SMAD3-210ENST00000559092 JAKMIP1Q96N16 626 aaKnown RBP20.26■□□□□ 0.83
SMAD3-210ENST00000559092 INPP4AQ96PE3 977 aaPredicted RBP20.26■□□□□ 0.83
SMAD3-210ENST00000559092 TRMT13Q9NUP7 481 aaKnown RBP20.26■□□□□ 0.83
SMAD3-210ENST00000559092 KLF18A0A0U1RQI7 1052 aa20.25■□□□□ 0.83
SMAD3-210ENST00000559092 CCDC196A0A1B0GTZ2 297 aa20.25■□□□□ 0.83
SMAD3-210ENST00000559092 SPATA31C2B4DYI2 1134 aa20.25■□□□□ 0.83
SMAD3-210ENST00000559092 PSMA5P28066 241 aa20.25■□□□□ 0.83
SMAD3-210ENST00000559092 FUT2Q10981 343 aa20.25■□□□□ 0.83
SMAD3-210ENST00000559092 TMEM240Q5SV17 173 aa20.25■□□□□ 0.83
SMAD3-210ENST00000559092 PCNX4Q63HM2 1172 aa20.25■□□□□ 0.83
SMAD3-210ENST00000559092 BLOC1S2Q6QNY1 142 aa20.25■□□□□ 0.83
SMAD3-210ENST00000559092 KAT2BQ92831 832 aa20.25■□□□□ 0.83
SMAD3-210ENST00000559092 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.25■□□□□ 0.832e-14■■■□□ 16.1
SMAD3-210ENST00000559092 KATNAL1Q9BW62 490 aa20.25■□□□□ 0.83
SMAD3-210ENST00000559092 IL23AQ9NPF7 189 aa20.25■□□□□ 0.83
SMAD3-210ENST00000559092 GGPS1O95749 300 aa20.24■□□□□ 0.83
SMAD3-210ENST00000559092 UBA1P22314 1058 aaKnown RBP20.24■□□□□ 0.83
SMAD3-210ENST00000559092 SP2Q02086 613 aa20.24■□□□□ 0.83
SMAD3-210ENST00000559092 HEATR3Q7Z4Q2 680 aa20.24■□□□□ 0.83
SMAD3-210ENST00000559092 RPUSD2Q8IZ73 545 aaKnown RBP20.24■□□□□ 0.83
SMAD3-210ENST00000559092 SPATA33Q96N06 139 aa20.24■□□□□ 0.83
SMAD3-210ENST00000559092 MLXIPQ9HAP2 919 aa20.24■□□□□ 0.83
SMAD3-210ENST00000559092 FAM217BQ9NTX9 383 aaPredicted RBP20.24■□□□□ 0.83
SMAD3-210ENST00000559092 MTMR10Q9NXD2 777 aa20.24■□□□□ 0.83
SMAD3-210ENST00000559092 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.23■□□□□ 0.83
SMAD3-210ENST00000559092 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.23■□□□□ 0.83
SMAD3-210ENST00000559092 hCG_1642624A0A1W2PR95 340 aa20.23■□□□□ 0.83
SMAD3-210ENST00000559092 GOLGA8AA7E2F4 631 aa20.23■□□□□ 0.83
SMAD3-210ENST00000559092 GOLGA8BA8MQT2 603 aa20.23■□□□□ 0.83
SMAD3-210ENST00000559092 hCG_1984214I3L0E3 225 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms