RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 ZNF792Q3KQV3 632 aa7.06□□□□□ -1.28
CTDSPL2-204ENST00000558966 STOX1Q6ZVD7 989 aa7.06□□□□□ -1.28
CTDSPL2-204ENST00000558966 CYB5R4Q7L1T6 521 aa7.06□□□□□ -1.28
CTDSPL2-204ENST00000558966 IQCA1Q86XH1 822 aa7.06□□□□□ -1.28
CTDSPL2-204ENST00000558966 DIS3LQ8TF46 1054 aaKnown RBP7.06□□□□□ -1.28
CTDSPL2-204ENST00000558966 ANKS1AQ92625 1134 aa7.06□□□□□ -1.28
CTDSPL2-204ENST00000558966 AGBL1Q96MI9 1066 aa7.06□□□□□ -1.28
CTDSPL2-204ENST00000558966 KRT23Q9C075 422 aa7.06□□□□□ -1.28
CTDSPL2-204ENST00000558966 LSG1Q9H089 658 aaKnown RBP7.06□□□□□ -1.28
CTDSPL2-204ENST00000558966 HOMER2Q9NSB8 354 aa7.06□□□□□ -1.28
CTDSPL2-204ENST00000558966 OGDHLQ9ULD0 1010 aa7.06□□□□□ -1.28
CTDSPL2-204ENST00000558966 CTDP1Q9Y5B0 961 aaPredicted RBP7.06□□□□□ -1.28
CTDSPL2-204ENST00000558966 RBM8AQ9Y5S9 174 aaKnown RBP7.06□□□□□ -1.28
CTDSPL2-204ENST00000558966 LCTP09848 1927 aa7.06□□□□□ -1.28
CTDSPL2-204ENST00000558966 DNAJC25-GNG10A0A024R161 153 aa7.05□□□□□ -1.28
CTDSPL2-204ENST00000558966 E7EWF7 191 aa7.05□□□□□ -1.28
CTDSPL2-204ENST00000558966 ZBTB24O43167 697 aaPredicted RBP7.05□□□□□ -1.28
CTDSPL2-204ENST00000558966 NEFLP07196 543 aa7.05□□□□□ -1.28
CTDSPL2-204ENST00000558966 SEC23AQ15436 765 aa7.05□□□□□ -1.28
CTDSPL2-204ENST00000558966 CCDC178Q5BJE1 867 aa7.05□□□□□ -1.28
CTDSPL2-204ENST00000558966 TMCO4Q5TGY1 634 aa7.05□□□□□ -1.28
CTDSPL2-204ENST00000558966 SYDE2Q5VT97 1194 aa7.05□□□□□ -1.28
CTDSPL2-204ENST00000558966 CCDC174Q6PII3 467 aa7.05□□□□□ -1.28
CTDSPL2-204ENST00000558966 CHST13Q8NET6 341 aa7.05□□□□□ -1.28
CTDSPL2-204ENST00000558966 FGD4Q96M96 766 aa7.05□□□□□ -1.28
CTDSPL2-204ENST00000558966 C1QTNF2Q9BXJ5 285 aa7.05□□□□□ -1.28
CTDSPL2-204ENST00000558966 RANBP17Q9H2T7 1088 aaKnown RBP7.05□□□□□ -1.28
CTDSPL2-204ENST00000558966 RNF146Q9NTX7 359 aa7.05□□□□□ -1.28
CTDSPL2-204ENST00000558966 SLC5A4Q9NY91 659 aa7.05□□□□□ -1.28
CTDSPL2-204ENST00000558966 LZTS3O60299 673 aaPredicted RBP7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 ICAM1P05362 532 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 GOLGA8HP0CJ92 632 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 ALAS1P13196 640 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 CAPN2P17655 700 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 ANTXR2P58335 489 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 DPYDQ12882 1025 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 COL9A3Q14050 684 aaPredicted RBP7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 MUM1L1Q5H9M0 696 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 PRAMEF19Q5SWL8 479 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 ANKMY2Q8IV38 441 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 ANKLE1Q8NAG6 615 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 FAM200AQ8TCP9 573 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 PAWRQ96IZ0 340 aaKnown RBP7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 UBAC1Q9BSL1 405 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 CPVLQ9H3G5 476 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 ACAD9Q9H845 621 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 KAT14Q9H8E8 782 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 A1CFQ9NQ94 594 aaKnown RBP7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 HCSTQ9UBK5 93 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 FBXO40Q9UH90 709 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 DDX20Q9UHI6 824 aaKnown RBP7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 KIAA1024Q9UPX6 916 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 NOD1Q9Y239 953 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 DIS3Q9Y2L1 958 aaKnown RBP7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 LRRC37A2A6NM11 1700 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 TRIOBPQ9H2D6 2365 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 CNGA1P29973 690 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 SKOR1P84550 965 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 CNTN2Q02246 1040 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 TRDNQ13061 729 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 TKFCQ3LXA3 575 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 GPATCH4Q5T3I0 446 aaKnown RBP7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 IFIT1BQ5T764 474 aaKnown RBP7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 MB21D2Q8IYB1 491 aaPredicted RBP7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 ANKRD35Q8N283 1001 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 RNF166Q96A37 237 aaPredicted RBP7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 DDX11Q96FC9 970 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 TRERF1Q96PN7 1200 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 TINF2Q9BSI4 451 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 UBA5Q9GZZ9 404 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 SENP2Q9HC62 589 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 ANO2Q9NQ90 1003 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 DNAAF2Q9NVR5 837 aaKnown RBP7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 CCPG1Q9ULG6 757 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 PCDHB11Q9Y5F2 797 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 BAZ2BQ9UIF8 2168 aaKnown RBP7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 MYH6P13533 1939 aa7.04□□□□□ -1.28
CTDSPL2-204ENST00000558966 ASTN1O14525 1302 aa7.03□□□□□ -1.28
CTDSPL2-204ENST00000558966 PFASO15067 1338 aa7.03□□□□□ -1.28
CTDSPL2-204ENST00000558966 SLC27A2O14975 620 aa7.03□□□□□ -1.28
CTDSPL2-204ENST00000558966 SEPT4O43236 478 aa7.03□□□□□ -1.28
CTDSPL2-204ENST00000558966 CDC45O75419 566 aa7.03□□□□□ -1.28
CTDSPL2-204ENST00000558966 NBPF20Q3BBV1 942 aa7.03□□□□□ -1.28
CTDSPL2-204ENST00000558966 ASPRV1Q53RT3 343 aa7.03□□□□□ -1.28
CTDSPL2-204ENST00000558966 ANO1Q5XXA6 986 aa7.03□□□□□ -1.28
CTDSPL2-204ENST00000558966 MAMDC4Q6UXC1 1216 aa7.03□□□□□ -1.28
CTDSPL2-204ENST00000558966 KIAA1211Q6ZU35 1233 aa7.03□□□□□ -1.28
CTDSPL2-204ENST00000558966 CHST3Q7LGC8 479 aa7.03□□□□□ -1.28
CTDSPL2-204ENST00000558966 RALYLQ86SE5 291 aaKnown RBP7.03□□□□□ -1.28
CTDSPL2-204ENST00000558966 FAM133AQ8N9E0 248 aa7.03□□□□□ -1.28
CTDSPL2-204ENST00000558966 NCOA7Q8NI08 942 aa7.03□□□□□ -1.28
CTDSPL2-204ENST00000558966 NRBP1Q9UHY1 535 aa7.03□□□□□ -1.28
CTDSPL2-204ENST00000558966 WDR19Q8NEZ3 1342 aa7.03□□□□□ -1.28
CTDSPL2-204ENST00000558966 SYNGAP1Q96PV0 1343 aa7.03□□□□□ -1.28
CTDSPL2-204ENST00000558966 ESPNB1AK53 854 aa7.02□□□□□ -1.28
CTDSPL2-204ENST00000558966 NFIBO00712 420 aa7.02□□□□□ -1.28
CTDSPL2-204ENST00000558966 IFIT3O14879 490 aaKnown RBP7.02□□□□□ -1.28
CTDSPL2-204ENST00000558966 MSCO60682 206 aa7.02□□□□□ -1.28
CTDSPL2-204ENST00000558966 SNAI1O95863 264 aaPredicted RBP7.02□□□□□ -1.28
CTDSPL2-204ENST00000558966 ZNF865P0CJ78 1059 aaPredicted RBP7.02□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms