RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 RBM28Q9NW13 759 aaKnown RBP12.98□□□□□ -0.33
BMP4-204ENST00000558961 SEC63Q9UGP8 760 aaKnown RBP12.98□□□□□ -0.33
BMP4-204ENST00000558961 BRPF3Q9ULD4 1205 aa12.98□□□□□ -0.33
BMP4-204ENST00000558961 SNX14Q9Y5W7 946 aa12.98□□□□□ -0.33
BMP4-204ENST00000558961 MEIS2O14770 477 aa12.97□□□□□ -0.33
BMP4-204ENST00000558961 KPNA6O60684 536 aa12.97□□□□□ -0.33
BMP4-204ENST00000558961 GH1P01241 217 aa12.97□□□□□ -0.33
BMP4-204ENST00000558961 ARHGAP1Q07960 439 aa12.97□□□□□ -0.33
BMP4-204ENST00000558961 TEX2Q8IWB9 1127 aa12.97□□□□□ -0.33
BMP4-204ENST00000558961 COPS5Q92905 334 aa12.97□□□□□ -0.33
BMP4-204ENST00000558961 TCEANC2Q96MN5 208 aa12.97□□□□□ -0.33
BMP4-204ENST00000558961 TMEM39AQ9NV64 488 aa12.97□□□□□ -0.33
BMP4-204ENST00000558961 DDX41Q9UJV9 622 aaKnown RBP12.97□□□□□ -0.33
BMP4-204ENST00000558961 DOCK5Q9H7D0 1870 aa12.96□□□□□ -0.33
BMP4-204ENST00000558961 TLR3O15455 904 aaKnown RBP12.96□□□□□ -0.33
BMP4-204ENST00000558961 ZBTB43O43298 467 aa12.96□□□□□ -0.33
BMP4-204ENST00000558961 STAM2O75886 525 aa12.96□□□□□ -0.33
BMP4-204ENST00000558961 TIMP1P01033 207 aa12.96□□□□□ -0.33
BMP4-204ENST00000558961 MMP3P08254 477 aa12.96□□□□□ -0.33
BMP4-204ENST00000558961 HOXD8P13378 290 aaPredicted RBP12.96□□□□□ -0.33
BMP4-204ENST00000558961 RAG1P15918 1043 aa12.96□□□□□ -0.33
BMP4-204ENST00000558961 CCND2P30279 289 aa12.96□□□□□ -0.33
BMP4-204ENST00000558961 BRDTQ58F21 947 aaPredicted RBP12.96□□□□□ -0.33
BMP4-204ENST00000558961 KCNV1Q6PIU1 500 aa12.96□□□□□ -0.33
BMP4-204ENST00000558961 SYNE3Q6ZMZ3 975 aa12.96□□□□□ -0.33
BMP4-204ENST00000558961 SEPT14Q6ZU15 432 aa12.96□□□□□ -0.33
BMP4-204ENST00000558961 RAB11FIP4Q86YS3 637 aa12.96□□□□□ -0.33
BMP4-204ENST00000558961 CMTR1Q8N1G2 835 aaKnown RBP12.96□□□□□ -0.33
BMP4-204ENST00000558961 VTI1AQ96AJ9 217 aa12.96□□□□□ -0.33
BMP4-204ENST00000558961 INPP4AQ96PE3 977 aaPredicted RBP12.96□□□□□ -0.33
BMP4-204ENST00000558961 MTG1Q9BT17 334 aaPredicted RBP12.96□□□□□ -0.33
BMP4-204ENST00000558961 FAM217BQ9NTX9 383 aaPredicted RBP12.96□□□□□ -0.33
BMP4-204ENST00000558961 SZT2Q5T011 3432 aa12.96□□□□□ -0.33
BMP4-204ENST00000558961 KLF18A0A0U1RQI7 1052 aa12.95□□□□□ -0.34
BMP4-204ENST00000558961 B4GALT4O60513 344 aa12.95□□□□□ -0.34
BMP4-204ENST00000558961 TGFB3P10600 412 aa12.95□□□□□ -0.34
BMP4-204ENST00000558961 PSMC6P62333 389 aa12.95□□□□□ -0.34
BMP4-204ENST00000558961 RTN1Q16799 776 aa12.95□□□□□ -0.34
BMP4-204ENST00000558961 LY6KQ17RY6 165 aa12.95□□□□□ -0.34
BMP4-204ENST00000558961 MFSD5Q6N075 450 aa12.95□□□□□ -0.34
BMP4-204ENST00000558961 BLOC1S2Q6QNY1 142 aa12.95□□□□□ -0.34
BMP4-204ENST00000558961 PIBF1Q8WXW3 757 aa12.95□□□□□ -0.34
BMP4-204ENST00000558961 LRCH3Q96II8 777 aa12.95□□□□□ -0.34
BMP4-204ENST00000558961 JAKMIP1Q96N16 626 aaKnown RBP12.95□□□□□ -0.34
BMP4-204ENST00000558961 TBC1D32Q96NH3 1257 aa12.95□□□□□ -0.34
BMP4-204ENST00000558961 ALDH8A1Q9H2A2 487 aaPredicted RBP12.95□□□□□ -0.34
BMP4-204ENST00000558961 MRVI1Q9Y6F6 885 aa12.95□□□□□ -0.34
BMP4-204ENST00000558961 hCG_1984214I3L0E3 225 aa12.94□□□□□ -0.34
BMP4-204ENST00000558961 EIF5BO60841 1220 aaKnown RBP12.94□□□□□ -0.34
BMP4-204ENST00000558961 MYL3P08590 195 aa12.94□□□□□ -0.34
BMP4-204ENST00000558961 RPS6KB1P23443 525 aa12.94□□□□□ -0.34
BMP4-204ENST00000558961 CDC27P30260 824 aa12.94□□□□□ -0.34
BMP4-204ENST00000558961 ICAM3P32942 547 aa12.94□□□□□ -0.34
BMP4-204ENST00000558961 EPHB4P54760 987 aa12.94□□□□□ -0.34
BMP4-204ENST00000558961 EVCP57679 992 aa12.94□□□□□ -0.34
BMP4-204ENST00000558961 MRPS9P82933 396 aaKnown RBP12.94□□□□□ -0.34
BMP4-204ENST00000558961 FPGSQ05932 587 aa12.94□□□□□ -0.34
BMP4-204ENST00000558961 PTPN11Q06124 597 aaPredicted RBP12.94□□□□□ -0.34
BMP4-204ENST00000558961 C9orf50Q5SZB4 431 aa12.94□□□□□ -0.34
BMP4-204ENST00000558961 PCNX4Q63HM2 1172 aa12.94□□□□□ -0.34
BMP4-204ENST00000558961 PPP1R18Q6NYC8 613 aa12.94□□□□□ -0.34
BMP4-204ENST00000558961 XRRA1Q6P2D8 792 aa12.94□□□□□ -0.34
BMP4-204ENST00000558961 NFRKBQ6P4R8 1299 aa12.94□□□□□ -0.34
BMP4-204ENST00000558961 USP17L6PQ6QN14 398 aa12.94□□□□□ -0.34
BMP4-204ENST00000558961 FCHSD1Q86WN1 690 aa12.94□□□□□ -0.34
BMP4-204ENST00000558961 ZNF713Q8N859 430 aaPredicted RBP12.94□□□□□ -0.34
BMP4-204ENST00000558961 PPTC7Q8NI37 304 aa12.94□□□□□ -0.34
BMP4-204ENST00000558961 AFG1LQ8WV93 481 aa12.94□□□□□ -0.34
BMP4-204ENST00000558961 GOLGA8AA7E2F4 631 aa12.93□□□□□ -0.34
BMP4-204ENST00000558961 GOLGA8BA8MQT2 603 aa12.93□□□□□ -0.34
BMP4-204ENST00000558961 F2P00734 622 aa12.93□□□□□ -0.34
BMP4-204ENST00000558961 MYCLP12524 364 aaPredicted RBP12.93□□□□□ -0.34
BMP4-204ENST00000558961 CPA1P15085 419 aa12.93□□□□□ -0.34
BMP4-204ENST00000558961 UBA1P22314 1058 aaKnown RBP12.93□□□□□ -0.34
BMP4-204ENST00000558961 PSMA5P28066 241 aa12.93□□□□□ -0.34
BMP4-204ENST00000558961 RBM25P49756 843 aaKnown RBP12.93□□□□□ -0.34
BMP4-204ENST00000558961 LAMC2Q13753 1193 aa12.93□□□□□ -0.34
BMP4-204ENST00000558961 SHHQ15465 462 aa12.93□□□□□ -0.34
BMP4-204ENST00000558961 MYSM1Q5VVJ2 828 aa12.93□□□□□ -0.34
BMP4-204ENST00000558961 SESTD1Q86VW0 696 aa12.93□□□□□ -0.34
BMP4-204ENST00000558961 SMARCC2Q8TAQ2 1214 aa12.93□□□□□ -0.34
BMP4-204ENST00000558961 CUL5Q93034 780 aa12.93□□□□□ -0.34
BMP4-204ENST00000558961 NOC4LQ9BVI4 516 aaKnown RBP12.93□□□□□ -0.34
BMP4-204ENST00000558961 USP26Q9BXU7 913 aa12.93□□□□□ -0.34
BMP4-204ENST00000558961 CCDC196A0A1B0GTZ2 297 aa12.92□□□□□ -0.34
BMP4-204ENST00000558961 hCG_1642624A0A1W2PR95 340 aa12.92□□□□□ -0.34
BMP4-204ENST00000558961 HAS3O00219 553 aa12.92□□□□□ -0.34
BMP4-204ENST00000558961 FIBPO43427 364 aa12.92□□□□□ -0.34
BMP4-204ENST00000558961 SUPT20HL2P0C7V6 817 aa12.92□□□□□ -0.34
BMP4-204ENST00000558961 CASTP20810 708 aaKnown RBP12.92□□□□□ -0.34
BMP4-204ENST00000558961 SP2Q02086 613 aa12.92□□□□□ -0.34
BMP4-204ENST00000558961 SEMA3FQ13275 785 aa12.92□□□□□ -0.34
BMP4-204ENST00000558961 DGKDQ16760 1214 aa12.92□□□□□ -0.34
BMP4-204ENST00000558961 NBPF20Q3BBV1 942 aa12.92□□□□□ -0.34
BMP4-204ENST00000558961 GNPTABQ3T906 1256 aa12.92□□□□□ -0.34
BMP4-204ENST00000558961 CELF3Q5SZQ8 465 aaKnown RBP12.92□□□□□ -0.34
BMP4-204ENST00000558961 WWC2Q6AWC2 1192 aa12.92□□□□□ -0.34
BMP4-204ENST00000558961 TYW1BQ6NUM6 668 aa12.92□□□□□ -0.34
BMP4-204ENST00000558961 Q6ZUG5 572 aa12.92□□□□□ -0.34
BMP4-204ENST00000558961 CCDC82Q8N4S0 544 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms