RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 ECI1P42126 302 aa6.16□□□□□ -1.42
CASC4-206ENST00000558847 SEPHS1P49903 392 aa6.16□□□□□ -1.42
CASC4-206ENST00000558847 CYP4F3Q08477 520 aa6.16□□□□□ -1.42
CASC4-206ENST00000558847 KCNAB2Q13303 367 aa6.16□□□□□ -1.42
CASC4-206ENST00000558847 HSF5Q4G112 596 aaPredicted RBP6.16□□□□□ -1.42
CASC4-206ENST00000558847 SLC35F1Q5T1Q4 408 aa6.16□□□□□ -1.42
CASC4-206ENST00000558847 STYK1Q6J9G0 422 aa6.16□□□□□ -1.42
CASC4-206ENST00000558847 CEP128Q6ZU80 1094 aa6.16□□□□□ -1.42
CASC4-206ENST00000558847 THNSL2Q86YJ6 484 aa6.16□□□□□ -1.42
CASC4-206ENST00000558847 TMEM145Q8NBT3 493 aa6.16□□□□□ -1.42
CASC4-206ENST00000558847 GSTCDQ8NEC7 633 aa6.16□□□□□ -1.42
CASC4-206ENST00000558847 PLCD4Q9BRC7 762 aa6.16□□□□□ -1.42
CASC4-206ENST00000558847 ZCCHC4Q9H5U6 513 aa6.16□□□□□ -1.42
CASC4-206ENST00000558847 MCM8Q9UJA3 840 aa6.16□□□□□ -1.42
CASC4-206ENST00000558847 YBX2Q9Y2T7 364 aaKnown RBP6.16□□□□□ -1.42
CASC4-206ENST00000558847 MYOCOSA0A1B0GUC4 107 aa6.15□□□□□ -1.42
CASC4-206ENST00000558847 C2orf71A6NGG8 1288 aa6.15□□□□□ -1.42
CASC4-206ENST00000558847 SEMA7AO75326 666 aa6.15□□□□□ -1.42
CASC4-206ENST00000558847 VAMP4O75379 141 aa6.15□□□□□ -1.42
CASC4-206ENST00000558847 C6orf222P0C671 652 aaPredicted RBP6.15□□□□□ -1.42
CASC4-206ENST00000558847 GALK1P51570 392 aa6.15□□□□□ -1.42
CASC4-206ENST00000558847 SCRN1Q12765 414 aa6.15□□□□□ -1.42
CASC4-206ENST00000558847 CBX2Q14781 532 aaPredicted RBP6.15□□□□□ -1.42
CASC4-206ENST00000558847 TESK1Q15569 626 aa6.15□□□□□ -1.42
CASC4-206ENST00000558847 DPY19L1Q2PZI1 675 aa6.15□□□□□ -1.42
CASC4-206ENST00000558847 WWC2Q6AWC2 1192 aa6.15□□□□□ -1.42
CASC4-206ENST00000558847 CYP2R1Q6VVX0 501 aa6.15□□□□□ -1.42
CASC4-206ENST00000558847 USP53Q70EK8 1073 aa6.15□□□□□ -1.42
CASC4-206ENST00000558847 LRRTM3Q86VH5 581 aa6.15□□□□□ -1.42
CASC4-206ENST00000558847 SIRT2Q8IXJ6 389 aa6.15□□□□□ -1.42
CASC4-206ENST00000558847 COPS5Q92905 334 aa6.15□□□□□ -1.42
CASC4-206ENST00000558847 MAGEB10Q96LZ2 347 aaPredicted RBP6.15□□□□□ -1.42
CASC4-206ENST00000558847 PTCHD1Q96NR3 888 aa6.15□□□□□ -1.42
CASC4-206ENST00000558847 JMJD8Q96S16 334 aa6.15□□□□□ -1.42
CASC4-206ENST00000558847 SGPP1Q9BX95 441 aa6.15□□□□□ -1.42
CASC4-206ENST00000558847 RFXAPO00287 272 aa6.14□□□□□ -1.43
CASC4-206ENST00000558847 MEFVO15553 781 aaPredicted RBP6.14□□□□□ -1.43
CASC4-206ENST00000558847 PEX10O60683 326 aa6.14□□□□□ -1.43
CASC4-206ENST00000558847 POU3F2P20265 443 aaPredicted RBP6.14□□□□□ -1.43
CASC4-206ENST00000558847 HOXA5P20719 270 aa6.14□□□□□ -1.43
CASC4-206ENST00000558847 IGFALSP35858 605 aa6.14□□□□□ -1.43
CASC4-206ENST00000558847 RTP1P59025 263 aa6.14□□□□□ -1.43
CASC4-206ENST00000558847 AMPD3Q01432 767 aa6.14□□□□□ -1.43
CASC4-206ENST00000558847 KIR3DS1Q14943 382 aa6.14□□□□□ -1.43
CASC4-206ENST00000558847 SNX17Q15036 470 aa6.14□□□□□ -1.43
CASC4-206ENST00000558847 C21orf62-AS1Q17RA5 79 aa6.14□□□□□ -1.43
CASC4-206ENST00000558847 UBE2R2Q712K3 238 aaPredicted RBP6.14□□□□□ -1.43
CASC4-206ENST00000558847 BRAPQ7Z569 592 aa6.14□□□□□ -1.43
CASC4-206ENST00000558847 PPIL6Q8IXY8 311 aa6.14□□□□□ -1.43
CASC4-206ENST00000558847 NAT16Q8N8M0 369 aa6.14□□□□□ -1.43
CASC4-206ENST00000558847 C1orf159Q96HA4 380 aa6.14□□□□□ -1.43
CASC4-206ENST00000558847 KRTAP4-11Q9BYQ6 195 aa6.14□□□□□ -1.43
CASC4-206ENST00000558847 SLC52A2Q9HAB3 445 aa6.14□□□□□ -1.43
CASC4-206ENST00000558847 TRIM39Q9HCM9 518 aa6.14□□□□□ -1.43
CASC4-206ENST00000558847 GPR27Q9NS67 375 aa6.14□□□□□ -1.43
CASC4-206ENST00000558847 A0A087X0B3 334 aa6.13□□□□□ -1.43
CASC4-206ENST00000558847 TEX51A0A1B0GUA7 166 aa6.13□□□□□ -1.43
CASC4-206ENST00000558847 A0A1W2PQ45 241 aaPredicted RBP6.13□□□□□ -1.43
CASC4-206ENST00000558847 A0A1W2PQY0 241 aa6.13□□□□□ -1.43
CASC4-206ENST00000558847 OPA1O60313 960 aa6.13□□□□□ -1.43
CASC4-206ENST00000558847 LTBRP36941 435 aa6.13□□□□□ -1.43
CASC4-206ENST00000558847 GPR85P60893 370 aa6.13□□□□□ -1.43
CASC4-206ENST00000558847 ZNF385BQ569K4 471 aa6.13□□□□□ -1.43
CASC4-206ENST00000558847 ADGRF1Q5T601 910 aa6.13□□□□□ -1.43
CASC4-206ENST00000558847 TCERG1LQ5VWI1 586 aa6.13□□□□□ -1.43
CASC4-206ENST00000558847 IFNL3Q8IZI9 196 aa6.13□□□□□ -1.43
CASC4-206ENST00000558847 NPLOC4Q8TAT6 608 aa6.13□□□□□ -1.43
CASC4-206ENST00000558847 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.13□□□□□ -1.432e-9■■■□□ 17.5
CASC4-206ENST00000558847 PANK1Q8TE04 598 aa6.13□□□□□ -1.43
CASC4-206ENST00000558847 DDX1Q92499 740 aaKnown RBP6.13□□□□□ -1.43
CASC4-206ENST00000558847 CLUHP3Q96NS8 147 aa6.13□□□□□ -1.43
CASC4-206ENST00000558847 ZNF552Q9H707 407 aaPredicted RBP6.13□□□□□ -1.43
CASC4-206ENST00000558847 PARD6AQ9NPB6 346 aa6.13□□□□□ -1.43
CASC4-206ENST00000558847 KCTD3Q9Y597 815 aa6.13□□□□□ -1.43
CASC4-206ENST00000558847 TAF6LQ9Y6J9 622 aa6.13□□□□□ -1.43
CASC4-206ENST00000558847 OR14I1A6ND48 311 aa6.12□□□□□ -1.43
CASC4-206ENST00000558847 GSG1L2A8MUP6 293 aa6.12□□□□□ -1.43
CASC4-206ENST00000558847 ALG1L2C9J202 215 aa6.12□□□□□ -1.43
CASC4-206ENST00000558847 MYO1BO43795 1136 aa6.12□□□□□ -1.43
CASC4-206ENST00000558847 THBDP07204 575 aa6.12□□□□□ -1.43
CASC4-206ENST00000558847 PAMP19021 973 aa6.12□□□□□ -1.43
CASC4-206ENST00000558847 PMLP29590 882 aa6.12□□□□□ -1.43
CASC4-206ENST00000558847 SF1Q15637 639 aaKnown RBP6.12□□□□□ -1.43
CASC4-206ENST00000558847 SLC14A2Q15849 920 aa6.12□□□□□ -1.43
CASC4-206ENST00000558847 NTRK3Q16288 839 aa6.12□□□□□ -1.43
CASC4-206ENST00000558847 CNNM4Q6P4Q7 775 aa6.12□□□□□ -1.43
CASC4-206ENST00000558847 DDX46Q7L014 1031 aaKnown RBP6.12□□□□□ -1.43
CASC4-206ENST00000558847 RNF180Q86T96 592 aa6.12□□□□□ -1.43
CASC4-206ENST00000558847 SLC7A14Q8TBB6 771 aa6.12□□□□□ -1.43
CASC4-206ENST00000558847 DIO2Q92813 273 aa6.12□□□□□ -1.43
CASC4-206ENST00000558847 RELTQ969Z4 430 aa6.12□□□□□ -1.43
CASC4-206ENST00000558847 CEP89Q96ST8 783 aa6.12□□□□□ -1.43
CASC4-206ENST00000558847 ALG1Q9BT22 464 aa6.12□□□□□ -1.43
CASC4-206ENST00000558847 CRTAC1Q9NQ79 661 aa6.12□□□□□ -1.43
CASC4-206ENST00000558847 IMPACTQ9P2X3 320 aa6.12□□□□□ -1.43
CASC4-206ENST00000558847 ACSL6Q9UKU0 697 aa6.12□□□□□ -1.43
CASC4-206ENST00000558847 NPFFR2Q9Y5X5 522 aa6.12□□□□□ -1.43
CASC4-206ENST00000558847 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.11□□□□□ -1.43
CASC4-206ENST00000558847 WTIPA6NIX2 430 aaPredicted RBP6.11□□□□□ -1.43
CASC4-206ENST00000558847 DNAJC8O75937 253 aaPredicted RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms