RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 MEN1O00255 615 aa11.61□□□□□ -0.55
SPG11-212ENST00000558790 LGR5O75473 907 aa11.61□□□□□ -0.55
SPG11-212ENST00000558790 PGK1P00558 417 aa11.61□□□□□ -0.55
SPG11-212ENST00000558790 CHGBP05060 677 aa11.61□□□□□ -0.55
SPG11-212ENST00000558790 RARBP10826 455 aa11.61□□□□□ -0.55
SPG11-212ENST00000558790 TAL1P17542 331 aaPredicted RBP11.61□□□□□ -0.55
SPG11-212ENST00000558790 ADD2P35612 726 aa11.61□□□□□ -0.55
SPG11-212ENST00000558790 TLE2Q04725 743 aa11.61□□□□□ -0.55
SPG11-212ENST00000558790 CCDC85BQ15834 202 aaPredicted RBP11.61□□□□□ -0.55
SPG11-212ENST00000558790 TMEM164Q5U3C3 297 aa11.61□□□□□ -0.55
SPG11-212ENST00000558790 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.61□□□□□ -0.55
SPG11-212ENST00000558790 MMP19Q99542 508 aa11.61□□□□□ -0.55
SPG11-212ENST00000558790 BCL11AQ9H165 835 aa11.61□□□□□ -0.55
SPG11-212ENST00000558790 ZNF358Q9NW07 568 aa11.61□□□□□ -0.55
SPG11-212ENST00000558790 ZBED9Q6R2W3 1325 aa11.6□□□□□ -0.55
SPG11-212ENST00000558790 C5orf42Q9H799 3197 aa11.6□□□□□ -0.55
SPG11-212ENST00000558790 PQBP1O60828 265 aaKnown RBP11.6□□□□□ -0.55
SPG11-212ENST00000558790 SLC25A27O95847 323 aa11.6□□□□□ -0.55
SPG11-212ENST00000558790 IL2RAP01589 272 aa11.6□□□□□ -0.55
SPG11-212ENST00000558790 CLTBP09497 229 aa11.6□□□□□ -0.55
SPG11-212ENST00000558790 CDK8P49336 464 aa11.6□□□□□ -0.55
SPG11-212ENST00000558790 MRE11P49959 708 aa11.6□□□□□ -0.55
SPG11-212ENST00000558790 EPHB4P54760 987 aa11.6□□□□□ -0.55
SPG11-212ENST00000558790 CTC1Q2NKJ3 1217 aa11.6□□□□□ -0.55
SPG11-212ENST00000558790 HSP90AB4PQ58FF6 505 aa11.6□□□□□ -0.55
SPG11-212ENST00000558790 MRPL14Q6P1L8 145 aaKnown RBP11.6□□□□□ -0.55
SPG11-212ENST00000558790 C16orf86Q6ZW13 317 aa11.6□□□□□ -0.55
SPG11-212ENST00000558790 TRIM46Q7Z4K8 759 aa11.6□□□□□ -0.55
SPG11-212ENST00000558790 CLASRPQ8N2M8 674 aaKnown RBP11.6□□□□□ -0.55
SPG11-212ENST00000558790 FAM200AQ8TCP9 573 aa11.6□□□□□ -0.55
SPG11-212ENST00000558790 KIF1BPQ96EK5 621 aa11.6□□□□□ -0.55
SPG11-212ENST00000558790 RNPC3Q96LT9 517 aaKnown RBP11.6□□□□□ -0.55
SPG11-212ENST00000558790 TINF2Q9BSI4 451 aa11.6□□□□□ -0.55
SPG11-212ENST00000558790 PAG1Q9NWQ8 432 aa11.6□□□□□ -0.55
SPG11-212ENST00000558790 NRBP1Q9UHY1 535 aa11.6□□□□□ -0.55
SPG11-212ENST00000558790 DACH1Q9UI36 760 aa11.6□□□□□ -0.55
SPG11-212ENST00000558790 ZNF214Q9UL59 606 aaPredicted RBP11.6□□□□□ -0.55
SPG11-212ENST00000558790 ADAMTS5Q9UNA0 930 aa11.6□□□□□ -0.55
SPG11-212ENST00000558790 RBM19Q9Y4C8 960 aaKnown RBP11.6□□□□□ -0.55
SPG11-212ENST00000558790 SPTBN4Q9H254 2564 aa11.6□□□□□ -0.55
SPG11-212ENST00000558790 VWA5AO00534 786 aa11.59□□□□□ -0.55
SPG11-212ENST00000558790 IFIT2P09913 472 aaKnown RBP11.59□□□□□ -0.55
SPG11-212ENST00000558790 EEF2P13639 858 aaKnown RBP11.59□□□□□ -0.55
SPG11-212ENST00000558790 SMCPP49901 116 aaPredicted RBP11.59□□□□□ -0.55
SPG11-212ENST00000558790 MRPS5P82675 430 aaKnown RBP11.59□□□□□ -0.55
SPG11-212ENST00000558790 HNRNPUQ00839 825 aaKnown RBP eCLIP11.59□□□□□ -0.55
SPG11-212ENST00000558790 ELOAQ14241 798 aaKnown RBP11.59□□□□□ -0.55
SPG11-212ENST00000558790 KCTD2Q14681 263 aa11.59□□□□□ -0.55
SPG11-212ENST00000558790 ZNF792Q3KQV3 632 aa11.59□□□□□ -0.55
SPG11-212ENST00000558790 FAM83BQ5T0W9 1011 aa11.59□□□□□ -0.55
SPG11-212ENST00000558790 C12orf60Q5U649 245 aa11.59□□□□□ -0.55
SPG11-212ENST00000558790 RNF180Q86T96 592 aa11.59□□□□□ -0.55
SPG11-212ENST00000558790 RIOX2Q8IUF8 465 aa11.59□□□□□ -0.55
SPG11-212ENST00000558790 REPS2Q8NFH8 660 aa11.59□□□□□ -0.55
SPG11-212ENST00000558790 CCDC17Q96LX7 622 aa11.59□□□□□ -0.55
SPG11-212ENST00000558790 INSM2Q96T92 566 aaPredicted RBP11.59□□□□□ -0.55
SPG11-212ENST00000558790 TSEN34Q9BSV6 310 aaKnown RBP11.59□□□□□ -0.55
SPG11-212ENST00000558790 AAASQ9NRG9 546 aa11.59□□□□□ -0.55
SPG11-212ENST00000558790 ATP8A2Q9NTI2 1148 aa11.59□□□□□ -0.55
SPG11-212ENST00000558790 PPP1R9AQ9ULJ8 1098 aa11.59□□□□□ -0.55
SPG11-212ENST00000558790 SYNRGQ9UMZ2 1314 aa11.59□□□□□ -0.55
SPG11-212ENST00000558790 KIAA0355O15063 1070 aa11.58□□□□□ -0.56
SPG11-212ENST00000558790 ADAMTS4O75173 837 aa11.58□□□□□ -0.56
SPG11-212ENST00000558790 ZNF865P0CJ78 1059 aaPredicted RBP11.58□□□□□ -0.56
SPG11-212ENST00000558790 BMP2P12643 396 aa11.58□□□□□ -0.56
SPG11-212ENST00000558790 AKR1A1P14550 325 aa11.58□□□□□ -0.56
SPG11-212ENST00000558790 SEC13P55735 322 aa11.58□□□□□ -0.56
SPG11-212ENST00000558790 TFF2Q03403 129 aa11.58□□□□□ -0.56
SPG11-212ENST00000558790 ADGRE1Q14246 886 aa11.58□□□□□ -0.56
SPG11-212ENST00000558790 SIRT2Q8IXJ6 389 aa11.58□□□□□ -0.56
SPG11-212ENST00000558790 TSEN2Q8NCE0 465 aaKnown RBP11.58□□□□□ -0.56
SPG11-212ENST00000558790 PURBQ96QR8 312 aaKnown RBP11.58□□□□□ -0.56
SPG11-212ENST00000558790 BOLA2Q9H3K6 86 aa11.58□□□□□ -0.56
SPG11-212ENST00000558790 TACC3Q9Y6A5 838 aa11.58□□□□□ -0.56
SPG11-212ENST00000558790 UPP2O95045 317 aa11.57□□□□□ -0.56
SPG11-212ENST00000558790 RAG1P15918 1043 aa11.57□□□□□ -0.56
SPG11-212ENST00000558790 STAT3P40763 770 aa11.57□□□□□ -0.56
SPG11-212ENST00000558790 FPGSQ05932 587 aa11.57□□□□□ -0.56
SPG11-212ENST00000558790 Q6ZNB5 142 aa11.57□□□□□ -0.56
SPG11-212ENST00000558790 AMOTL1Q8IY63 956 aa11.57□□□□□ -0.56
SPG11-212ENST00000558790 CRIPAKQ8N1N5 446 aa11.57□□□□□ -0.56
SPG11-212ENST00000558790 NUP88Q99567 741 aaPredicted RBP11.57□□□□□ -0.56
SPG11-212ENST00000558790 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.57□□□□□ -0.56
SPG11-212ENST00000558790 ZNF576Q9H609 170 aa11.57□□□□□ -0.56
SPG11-212ENST00000558790 KANSL2Q9H9L4 492 aa11.57□□□□□ -0.56
SPG11-212ENST00000558790 DIS3Q9Y2L1 958 aaKnown RBP11.57□□□□□ -0.56
SPG11-212ENST00000558790 SCN5AQ14524 2016 aa11.57□□□□□ -0.56
SPG11-212ENST00000558790 MYADML2A6NDP7 307 aa11.56□□□□□ -0.56
SPG11-212ENST00000558790 ADCY6O43306 1168 aa11.56□□□□□ -0.56
SPG11-212ENST00000558790 ATP5JP18859 108 aa11.56□□□□□ -0.56
SPG11-212ENST00000558790 COPB2P35606 906 aa11.56□□□□□ -0.56
SPG11-212ENST00000558790 KCNQ1P51787 676 aa11.56□□□□□ -0.56
SPG11-212ENST00000558790 ACLYP53396 1101 aa11.56□□□□□ -0.56
SPG11-212ENST00000558790 FAAP100Q0VG06 881 aa11.56□□□□□ -0.56
SPG11-212ENST00000558790 CLN3Q13286 438 aa11.56□□□□□ -0.56
SPG11-212ENST00000558790 SNRNP48Q6IEG0 339 aaKnown RBP11.56□□□□□ -0.56
SPG11-212ENST00000558790 CTR9Q6PD62 1173 aa11.56□□□□□ -0.56
SPG11-212ENST00000558790 ANKRD33Q7Z3H0 272 aa11.56□□□□□ -0.56
SPG11-212ENST00000558790 HAUS7Q99871 368 aa11.56□□□□□ -0.56
SPG11-212ENST00000558790 SLF1Q9BQI6 1058 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms