RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 SLC4A4Q9Y6R1 1079 aa14.19□□□□□ -0.14
SMAD3-206ENST00000558739 ZFYVE26Q68DK2 2539 aa14.18□□□□□ -0.14
SMAD3-206ENST00000558739 NFIBO00712 420 aa14.18□□□□□ -0.14
SMAD3-206ENST00000558739 GRM6O15303 877 aa14.18□□□□□ -0.14
SMAD3-206ENST00000558739 BMP3P12645 472 aa14.18□□□□□ -0.14
SMAD3-206ENST00000558739 AVPR2P30518 371 aa14.18□□□□□ -0.14
SMAD3-206ENST00000558739 BAATQ14032 418 aaPredicted RBP14.18□□□□□ -0.14
SMAD3-206ENST00000558739 TRIM71Q2Q1W2 868 aaKnown RBP14.18□□□□□ -0.14
SMAD3-206ENST00000558739 ZNF618Q5T7W0 954 aa14.18□□□□□ -0.14
SMAD3-206ENST00000558739 AMOTL1Q8IY63 956 aa14.18□□□□□ -0.14
SMAD3-206ENST00000558739 TMEM57Q8N5G2 664 aa14.18□□□□□ -0.14
SMAD3-206ENST00000558739 GMCL1P1Q8NEA9 526 aa14.18□□□□□ -0.14
SMAD3-206ENST00000558739 KDM4AO75164 1064 aa14.17□□□□□ -0.14
SMAD3-206ENST00000558739 ZNF200P98182 395 aaPredicted RBP14.17□□□□□ -0.14
SMAD3-206ENST00000558739 IKQ13123 557 aaPredicted RBP14.17□□□□□ -0.14
SMAD3-206ENST00000558739 HIC1Q14526 733 aa14.17□□□□□ -0.14
SMAD3-206ENST00000558739 PKN1Q16512 942 aa14.17□□□□□ -0.14
SMAD3-206ENST00000558739 KCTD1Q719H9 257 aa14.17□□□□□ -0.14
SMAD3-206ENST00000558739 YME1L1Q96TA2 773 aa14.17□□□□□ -0.14
SMAD3-206ENST00000558739 PUS7LQ9H0K6 701 aaKnown RBP14.17□□□□□ -0.14
SMAD3-206ENST00000558739 BCL11AQ9H165 835 aa14.17□□□□□ -0.14
SMAD3-206ENST00000558739 IGFLR1Q9H665 355 aa14.17□□□□□ -0.14
SMAD3-206ENST00000558739 MTMR4Q9NYA4 1195 aa14.17□□□□□ -0.14
SMAD3-206ENST00000558739 CD207Q9UJ71 328 aa14.17□□□□□ -0.14
SMAD3-206ENST00000558739 LOC730098B7Z3J9 87 aa14.16□□□□□ -0.14
SMAD3-206ENST00000558739 UPP2O95045 317 aa14.16□□□□□ -0.14
SMAD3-206ENST00000558739 LINC00271P0C7V0 271 aa14.16□□□□□ -0.14
SMAD3-206ENST00000558739 SIGLEC14Q08ET2 396 aa14.16□□□□□ -0.14
SMAD3-206ENST00000558739 TKFCQ3LXA3 575 aa14.16□□□□□ -0.14
SMAD3-206ENST00000558739 SESTD1Q86VW0 696 aa14.16□□□□□ -0.14
SMAD3-206ENST00000558739 DBF4BQ8NFT6 615 aa14.16□□□□□ -0.14
SMAD3-206ENST00000558739 AFG1LQ8WV93 481 aa14.16□□□□□ -0.14
SMAD3-206ENST00000558739 MKL1Q969V6 931 aa14.16□□□□□ -0.14
SMAD3-206ENST00000558739 MKNK2Q9HBH9 465 aa14.16□□□□□ -0.14
SMAD3-206ENST00000558739 INCENPQ9NQS7 918 aa14.16□□□□□ -0.14
SMAD3-206ENST00000558739 ARPP21Q9UBL0 812 aaPredicted RBP14.16□□□□□ -0.14
SMAD3-206ENST00000558739 HDAC6Q9UBN7 1215 aa14.16□□□□□ -0.14
SMAD3-206ENST00000558739 GTF2IRD1Q9UHL9 959 aa14.16□□□□□ -0.14
SMAD3-206ENST00000558739 CCPG1Q9ULG6 757 aa14.16□□□□□ -0.14
SMAD3-206ENST00000558739 RAD50Q92878 1312 aa14.15□□□□□ -0.14
SMAD3-206ENST00000558739 FASNP49327 2511 aaKnown RBP14.15□□□□□ -0.14
SMAD3-206ENST00000558739 EFCAB14O75071 495 aa14.15□□□□□ -0.14
SMAD3-206ENST00000558739 AMHP03971 560 aa14.15□□□□□ -0.14
SMAD3-206ENST00000558739 MMP3P08254 477 aa14.15□□□□□ -0.14
SMAD3-206ENST00000558739 CTNNB1P35222 781 aa14.15□□□□□ -0.14
SMAD3-206ENST00000558739 BRDTQ58F21 947 aaPredicted RBP14.15□□□□□ -0.14
SMAD3-206ENST00000558739 FRMD5Q7Z6J6 570 aa14.15□□□□□ -0.14
SMAD3-206ENST00000558739 RPAP2Q8IXW5 612 aaPredicted RBP14.15□□□□□ -0.14
SMAD3-206ENST00000558739 FRAT1Q92837 279 aaPredicted RBP14.15□□□□□ -0.14
SMAD3-206ENST00000558739 MSLNLQ96KJ4 702 aa14.15□□□□□ -0.14
SMAD3-206ENST00000558739 SAMD11Q96NU1 681 aa14.15□□□□□ -0.14
SMAD3-206ENST00000558739 CLEC1BQ9P126 229 aa14.15□□□□□ -0.14
SMAD3-206ENST00000558739 CEP295Q9C0D2 2601 aa14.15□□□□□ -0.14
SMAD3-206ENST00000558739 KIAA1671Q9BY89 1806 aa14.14□□□□□ -0.15
SMAD3-206ENST00000558739 MINDY4BA8MYZ0 360 aa14.14□□□□□ -0.15
SMAD3-206ENST00000558739 TTLL1O95922 423 aa14.14□□□□□ -0.15
SMAD3-206ENST00000558739 CT47B1P0C2W7 299 aaPredicted RBP14.14□□□□□ -0.15
SMAD3-206ENST00000558739 ZNF286BP0CG31 522 aa14.14□□□□□ -0.15
SMAD3-206ENST00000558739 TXNP10599 105 aaKnown RBP14.14□□□□□ -0.15
SMAD3-206ENST00000558739 MCCP23508 829 aa14.14□□□□□ -0.15
SMAD3-206ENST00000558739 NBL1P41271 181 aa14.14□□□□□ -0.15
SMAD3-206ENST00000558739 PDE4BQ07343 736 aa14.14□□□□□ -0.15
SMAD3-206ENST00000558739 CBX2Q14781 532 aaPredicted RBP14.14□□□□□ -0.15
SMAD3-206ENST00000558739 SMRP1Q8NCR6 262 aa14.14□□□□□ -0.15
SMAD3-206ENST00000558739 STAG1Q8WVM7 1258 aa14.14□□□□□ -0.15
SMAD3-206ENST00000558739 DDRGK1Q96HY6 314 aa14.14□□□□□ -0.15
SMAD3-206ENST00000558739 EPB41L4AQ9HCS5 686 aaPredicted RBP14.14□□□□□ -0.15
SMAD3-206ENST00000558739 PAG1Q9NWQ8 432 aa14.14□□□□□ -0.15
SMAD3-206ENST00000558739 PRR12Q9ULL5 1215 aa14.14□□□□□ -0.15
SMAD3-206ENST00000558739 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.13□□□□□ -0.15
SMAD3-206ENST00000558739 PTPDC1A2A3K4 754 aa14.13□□□□□ -0.15
SMAD3-206ENST00000558739 GALR2O43603 387 aaPredicted RBP14.13□□□□□ -0.15
SMAD3-206ENST00000558739 KPNA6O60684 536 aa14.13□□□□□ -0.15
SMAD3-206ENST00000558739 EYA4O95677 639 aa14.13□□□□□ -0.15
SMAD3-206ENST00000558739 CALML3P27482 149 aa14.13□□□□□ -0.15
SMAD3-206ENST00000558739 SLC1A4P43007 532 aa14.13□□□□□ -0.15
SMAD3-206ENST00000558739 NDUFV1P49821 464 aa14.13□□□□□ -0.15
SMAD3-206ENST00000558739 RRP1P56182 461 aaKnown RBP14.13□□□□□ -0.15
SMAD3-206ENST00000558739 CAMK1Q14012 370 aa14.13□□□□□ -0.15
SMAD3-206ENST00000558739 ADGRD2Q7Z7M1 963 aa14.13□□□□□ -0.15
SMAD3-206ENST00000558739 ADSSL1Q8N142 457 aa14.13□□□□□ -0.15
SMAD3-206ENST00000558739 SCFD2Q8WU76 684 aa14.13□□□□□ -0.15
SMAD3-206ENST00000558739 RPGRIP1Q96KN7 1286 aa14.13□□□□□ -0.15
SMAD3-206ENST00000558739 ADD3Q9UEY8 706 aaKnown RBP14.13□□□□□ -0.15
SMAD3-206ENST00000558739 USP15Q9Y4E8 981 aaPredicted RBP14.13□□□□□ -0.15
SMAD3-206ENST00000558739 MYO10Q9HD67 2058 aa14.13□□□□□ -0.15
SMAD3-206ENST00000558739 PLIN4Q96Q06 1357 aa14.12□□□□□ -0.15
SMAD3-206ENST00000558739 GSG1L2A8MUP6 293 aa14.12□□□□□ -0.15
SMAD3-206ENST00000558739 NKRFO15226 690 aaKnown RBP eCLIP14.12□□□□□ -0.15
SMAD3-206ENST00000558739 NCK2O43639 380 aa14.12□□□□□ -0.15
SMAD3-206ENST00000558739 PARNO95453 639 aaKnown RBP14.12□□□□□ -0.15
SMAD3-206ENST00000558739 FDX1P10109 184 aa14.12□□□□□ -0.15
SMAD3-206ENST00000558739 EDNRBP24530 442 aa14.12□□□□□ -0.15
SMAD3-206ENST00000558739 RBM10P98175 930 aaKnown RBP14.12□□□□□ -0.15
SMAD3-206ENST00000558739 ARHGAP1Q07960 439 aa14.12□□□□□ -0.15
SMAD3-206ENST00000558739 PDE4DQ08499 809 aa14.12□□□□□ -0.15
SMAD3-206ENST00000558739 ADAM15Q13444 863 aa14.12□□□□□ -0.15
SMAD3-206ENST00000558739 CHST3Q7LGC8 479 aa14.12□□□□□ -0.15
SMAD3-206ENST00000558739 FAM160B2Q86V87 743 aa14.12□□□□□ -0.15
SMAD3-206ENST00000558739 TMEM105Q8N8V8 129 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms