RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 STK4Q13043 487 aa12.09□□□□□ -0.47
CSPG4P5-201ENST00000558731 GPR162Q16538 588 aa12.09□□□□□ -0.47
CSPG4P5-201ENST00000558731 DCAF15Q66K64 600 aa12.09□□□□□ -0.47
CSPG4P5-201ENST00000558731 ENOX1Q8TC92 643 aaKnown RBP12.09□□□□□ -0.47
CSPG4P5-201ENST00000558731 LRRC15Q8TF66 581 aa12.09□□□□□ -0.47
CSPG4P5-201ENST00000558731 CCSER1Q9C0I3 900 aa12.09□□□□□ -0.47
CSPG4P5-201ENST00000558731 RGL1Q9NZL6 768 aa12.09□□□□□ -0.47
CSPG4P5-201ENST00000558731 CLEC11AQ9Y240 323 aa12.09□□□□□ -0.47
CSPG4P5-201ENST00000558731 FAM86B1E9PN63 330 aa12.08□□□□□ -0.48
CSPG4P5-201ENST00000558731 NFIBO00712 420 aa12.08□□□□□ -0.48
CSPG4P5-201ENST00000558731 NPM3O75607 178 aaKnown RBP12.08□□□□□ -0.48
CSPG4P5-201ENST00000558731 FAM86B2P0C5J1 330 aa12.08□□□□□ -0.48
CSPG4P5-201ENST00000558731 NOVP48745 357 aa12.08□□□□□ -0.48
CSPG4P5-201ENST00000558731 SARSP49591 514 aaKnown RBP12.08□□□□□ -0.48
CSPG4P5-201ENST00000558731 CTTNQ14247 550 aaKnown RBP12.08□□□□□ -0.48
CSPG4P5-201ENST00000558731 HERC4Q5GLZ8 1057 aaPredicted RBP12.08□□□□□ -0.48
CSPG4P5-201ENST00000558731 ZNF658Q5TYW1 1059 aaPredicted RBP12.08□□□□□ -0.48
CSPG4P5-201ENST00000558731 GPBP1Q86WP2 473 aa12.08□□□□□ -0.48
CSPG4P5-201ENST00000558731 PIGOQ8TEQ8 1089 aa12.08□□□□□ -0.48
CSPG4P5-201ENST00000558731 P2RX7Q99572 595 aaKnown RBP12.08□□□□□ -0.48
CSPG4P5-201ENST00000558731 BPIFA3Q9BQP9 254 aa12.08□□□□□ -0.48
CSPG4P5-201ENST00000558731 TRIM9Q9C026 710 aa12.08□□□□□ -0.48
CSPG4P5-201ENST00000558731 GLT8D2Q9H1C3 349 aa12.08□□□□□ -0.48
CSPG4P5-201ENST00000558731 MRPL11Q9Y3B7 192 aaKnown RBP12.08□□□□□ -0.48
CSPG4P5-201ENST00000558731 LTBP1Q14766 1721 aa12.08□□□□□ -0.48
CSPG4P5-201ENST00000558731 PRPHP41219 470 aa12.08□□□□□ -0.48
CSPG4P5-201ENST00000558731 GSDMDP57764 484 aa12.08□□□□□ -0.48
CSPG4P5-201ENST00000558731 GRB10Q13322 594 aa12.08□□□□□ -0.48
CSPG4P5-201ENST00000558731 KIAA1524Q8TCG1 905 aa12.08□□□□□ -0.48
CSPG4P5-201ENST00000558731 DDX12PQ92771 950 aa12.08□□□□□ -0.48
CSPG4P5-201ENST00000558731 PURBQ96QR8 312 aaKnown RBP12.08□□□□□ -0.48
CSPG4P5-201ENST00000558731 SLF1Q9BQI6 1058 aa12.08□□□□□ -0.48
CSPG4P5-201ENST00000558731 TESPA1A2RU30 521 aaPredicted RBP12.08□□□□□ -0.48
CSPG4P5-201ENST00000558731 PEX10O60683 326 aa12.08□□□□□ -0.48
CSPG4P5-201ENST00000558731 TPM1P09493 284 aa12.08□□□□□ -0.48
CSPG4P5-201ENST00000558731 PTGER2P43116 358 aa12.08□□□□□ -0.48
CSPG4P5-201ENST00000558731 UBXN1Q04323 297 aa12.08□□□□□ -0.48
CSPG4P5-201ENST00000558731 SULF1Q8IWU6 871 aa12.08□□□□□ -0.48
CSPG4P5-201ENST00000558731 HAS1Q92839 578 aa12.08□□□□□ -0.48
CSPG4P5-201ENST00000558731 MYMKA6NI61 221 aa12.07□□□□□ -0.48
CSPG4P5-201ENST00000558731 USP27XA6NNY8 438 aa12.07□□□□□ -0.48
CSPG4P5-201ENST00000558731 SFI1A8K8P3 1242 aa12.07□□□□□ -0.48
CSPG4P5-201ENST00000558731 PPP1R3GB7ZBB8 358 aa12.07□□□□□ -0.48
CSPG4P5-201ENST00000558731 GAS7O60861 476 aa12.07□□□□□ -0.48
CSPG4P5-201ENST00000558731 TNNT1P13805 278 aa12.07□□□□□ -0.48
CSPG4P5-201ENST00000558731 RPS12P25398 132 aaKnown RBP12.07□□□□□ -0.48
CSPG4P5-201ENST00000558731 LRCH2Q5VUJ6 765 aa12.07□□□□□ -0.48
CSPG4P5-201ENST00000558731 IGSF22Q8N9C0 903 aa12.07□□□□□ -0.48
CSPG4P5-201ENST00000558731 MYRIPQ8NFW9 859 aa12.07□□□□□ -0.48
CSPG4P5-201ENST00000558731 ERMNQ8TAM6 284 aa12.07□□□□□ -0.48
CSPG4P5-201ENST00000558731 MMTAG2Q9BU76 263 aaKnown RBP12.07□□□□□ -0.48
CSPG4P5-201ENST00000558731 CDK5RAP2Q96SN8 1893 aa12.07□□□□□ -0.48
CSPG4P5-201ENST00000558731 LMNB1P20700 586 aa12.07□□□□□ -0.48
CSPG4P5-201ENST00000558731 SH3RF1Q7Z6J0 888 aa12.07□□□□□ -0.48
CSPG4P5-201ENST00000558731 ATG4CQ96DT6 458 aa12.07□□□□□ -0.48
CSPG4P5-201ENST00000558731 MED15Q96RN5 788 aa12.07□□□□□ -0.48
CSPG4P5-201ENST00000558731 CGNQ9P2M7 1197 aaKnown RBP12.07□□□□□ -0.48
CSPG4P5-201ENST00000558731 KCNJ18B7U540 433 aa12.07□□□□□ -0.48
CSPG4P5-201ENST00000558731 GCFC2P16383 781 aaKnown RBP12.07□□□□□ -0.48
CSPG4P5-201ENST00000558731 ERCC5P28715 1186 aaPredicted RBP12.07□□□□□ -0.48
CSPG4P5-201ENST00000558731 PMS1P54277 932 aaKnown RBP12.07□□□□□ -0.48
CSPG4P5-201ENST00000558731 DMTNQ08495 405 aa12.07□□□□□ -0.48
CSPG4P5-201ENST00000558731 KCNJ12Q14500 433 aa12.07□□□□□ -0.48
CSPG4P5-201ENST00000558731 ADM5C9JUS6 153 aa12.06□□□□□ -0.48
CSPG4P5-201ENST00000558731 VCAM1P19320 739 aa12.06□□□□□ -0.48
CSPG4P5-201ENST00000558731 MKRN3Q13064 507 aaKnown RBP12.06□□□□□ -0.48
CSPG4P5-201ENST00000558731 AP3B2Q13367 1082 aa12.06□□□□□ -0.48
CSPG4P5-201ENST00000558731 ECM1Q16610 540 aa12.06□□□□□ -0.48
CSPG4P5-201ENST00000558731 ARMCX5Q6P1M9 558 aa12.06□□□□□ -0.48
CSPG4P5-201ENST00000558731 PRPF38AQ8NAV1 312 aaKnown RBP12.06□□□□□ -0.48
CSPG4P5-201ENST00000558731 DCPSQ96C86 337 aaKnown RBP12.06□□□□□ -0.48
CSPG4P5-201ENST00000558731 MTMR9Q96QG7 549 aa12.06□□□□□ -0.48
CSPG4P5-201ENST00000558731 PAGR1Q9BTK6 254 aa12.06□□□□□ -0.48
CSPG4P5-201ENST00000558731 HSD3B7Q9H2F3 369 aa12.06□□□□□ -0.48
CSPG4P5-201ENST00000558731 FEM1BQ9UK73 627 aa12.06□□□□□ -0.48
CSPG4P5-201ENST00000558731 ZBED4O75132 1171 aa12.06□□□□□ -0.48
CSPG4P5-201ENST00000558731 FOSP01100 380 aaPredicted RBP12.06□□□□□ -0.48
CSPG4P5-201ENST00000558731 ENOX2Q16206 610 aaKnown RBP12.06□□□□□ -0.48
CSPG4P5-201ENST00000558731 FAM160B2Q86V87 743 aa12.06□□□□□ -0.48
CSPG4P5-201ENST00000558731 CCDC150Q8NCX0 1101 aa12.06□□□□□ -0.48
CSPG4P5-201ENST00000558731 GLIS3Q8NEA6 775 aa12.06□□□□□ -0.48
CSPG4P5-201ENST00000558731 PNMA5Q96PV4 448 aa12.06□□□□□ -0.48
CSPG4P5-201ENST00000558731 BHMT2Q9H2M3 363 aa12.06□□□□□ -0.48
CSPG4P5-201ENST00000558731 TMOD4Q9NZQ9 345 aa12.06□□□□□ -0.48
CSPG4P5-201ENST00000558731 PLA2G4BP0C869 781 aa12.06□□□□□ -0.48
CSPG4P5-201ENST00000558731 HAUS3Q68CZ6 603 aa12.06□□□□□ -0.48
CSPG4P5-201ENST00000558731 ZNF577Q9BSK1 485 aa12.06□□□□□ -0.48
CSPG4P5-201ENST00000558731 DESI2Q9BSY9 194 aa12.06□□□□□ -0.48
CSPG4P5-201ENST00000558731 MYH4Q9Y623 1939 aa12.05□□□□□ -0.48
CSPG4P5-201ENST00000558731 KRT31Q15323 416 aa12.05□□□□□ -0.48
CSPG4P5-201ENST00000558731 SPECC1LQ69YQ0 1117 aa12.05□□□□□ -0.48
CSPG4P5-201ENST00000558731 PPP4R3AQ6IN85 833 aa12.05□□□□□ -0.48
CSPG4P5-201ENST00000558731 CNNM4Q6P4Q7 775 aa12.05□□□□□ -0.48
CSPG4P5-201ENST00000558731 GADL1Q6ZQY3 521 aa12.05□□□□□ -0.48
CSPG4P5-201ENST00000558731 MOB2Q70IA6 237 aa12.05□□□□□ -0.48
CSPG4P5-201ENST00000558731 CNKSR2Q8WXI2 1034 aa12.05□□□□□ -0.48
CSPG4P5-201ENST00000558731 RAD54LQ92698 747 aa12.05□□□□□ -0.48
CSPG4P5-201ENST00000558731 VPS33BQ9H267 617 aa12.05□□□□□ -0.48
CSPG4P5-201ENST00000558731 EHMT1Q9H9B1 1298 aa12.05□□□□□ -0.48
CSPG4P5-201ENST00000558731 GPRC5DQ9NZD1 345 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms