RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 PTGS1P23219 599 aa14.17□□□□□ -0.14
SMAD3-205ENST00000558428 TMEM63BQ5T3F8 832 aa14.17□□□□□ -0.14
SMAD3-205ENST00000558428 VSIG10LQ86VR7 867 aa14.17□□□□□ -0.14
SMAD3-205ENST00000558428 TEX2Q8IWB9 1127 aa14.17□□□□□ -0.14
SMAD3-205ENST00000558428 ZFP91Q96JP5 570 aaPredicted RBP14.17□□□□□ -0.14
SMAD3-205ENST00000558428 SENP6Q9GZR1 1112 aaPredicted RBP14.17□□□□□ -0.14
SMAD3-205ENST00000558428 ZMYND12Q9H0C1 365 aa14.17□□□□□ -0.14
SMAD3-205ENST00000558428 AP5M1Q9H0R1 490 aa14.17□□□□□ -0.14
SMAD3-205ENST00000558428 UPF3AQ9H1J1 476 aaKnown RBP14.17□□□□□ -0.14
SMAD3-205ENST00000558428 EHMT1Q9H9B1 1298 aa14.17□□□□□ -0.14
SMAD3-205ENST00000558428 C6orf50Q9HD87 102 aa14.17□□□□□ -0.14
SMAD3-205ENST00000558428 VPS54Q9P1Q0 977 aa14.17□□□□□ -0.14
SMAD3-205ENST00000558428 PCDHA6Q9UN73 950 aa14.17□□□□□ -0.14
SMAD3-205ENST00000558428 PCDHA8Q9Y5H6 950 aa14.17□□□□□ -0.14
SMAD3-205ENST00000558428 ALPK3Q96L96 1907 aa14.17□□□□□ -0.14
SMAD3-205ENST00000558428 ESYT2A0FGR8 921 aa14.16□□□□□ -0.14
SMAD3-205ENST00000558428 NKRFO15226 690 aaKnown RBP eCLIP14.16□□□□□ -0.14
SMAD3-205ENST00000558428 ST18O60284 1047 aa14.16□□□□□ -0.14
SMAD3-205ENST00000558428 DTNBO60941 627 aa14.16□□□□□ -0.14
SMAD3-205ENST00000558428 ARIH2O95376 493 aa14.16□□□□□ -0.14
SMAD3-205ENST00000558428 CTDNEP1O95476 244 aa14.16□□□□□ -0.14
SMAD3-205ENST00000558428 TXNP10599 105 aaKnown RBP14.16□□□□□ -0.14
SMAD3-205ENST00000558428 GNA11P29992 359 aa14.16□□□□□ -0.14
SMAD3-205ENST00000558428 IRX5P78411 483 aaPredicted RBP14.16□□□□□ -0.14
SMAD3-205ENST00000558428 GNASQ5JWF2 1037 aa14.16□□□□□ -0.14
SMAD3-205ENST00000558428 KLHDC9Q8NEP7 349 aa14.16□□□□□ -0.14
SMAD3-205ENST00000558428 OR6J1Q8NGC5 347 aa14.16□□□□□ -0.14
SMAD3-205ENST00000558428 COPS5Q92905 334 aa14.16□□□□□ -0.14
SMAD3-205ENST00000558428 PGBD1Q96JS3 809 aa14.16□□□□□ -0.14
SMAD3-205ENST00000558428 SH3GLB2Q9NR46 395 aa14.16□□□□□ -0.14
SMAD3-205ENST00000558428 Q9Y3F1 56 aa14.16□□□□□ -0.14
SMAD3-205ENST00000558428 STK36Q9NRP7 1315 aa14.15□□□□□ -0.14
SMAD3-205ENST00000558428 STAM2O75886 525 aa14.15□□□□□ -0.14
SMAD3-205ENST00000558428 RGS20O76081 388 aa14.15□□□□□ -0.14
SMAD3-205ENST00000558428 FOSP01100 380 aaPredicted RBP14.15□□□□□ -0.14
SMAD3-205ENST00000558428 CST5P28325 142 aaPredicted RBP14.15□□□□□ -0.14
SMAD3-205ENST00000558428 CLK2P49760 499 aaKnown RBP14.15□□□□□ -0.14
SMAD3-205ENST00000558428 NLRP5P59047 1200 aa14.15□□□□□ -0.14
SMAD3-205ENST00000558428 MRPS9P82933 396 aaKnown RBP14.15□□□□□ -0.14
SMAD3-205ENST00000558428 BEX3Q00994 111 aa14.15□□□□□ -0.14
SMAD3-205ENST00000558428 AP3B2Q13367 1082 aa14.15□□□□□ -0.14
SMAD3-205ENST00000558428 KCNA10Q16322 511 aa14.15□□□□□ -0.14
SMAD3-205ENST00000558428 LY6KQ17RY6 165 aa14.15□□□□□ -0.14
SMAD3-205ENST00000558428 GNPTABQ3T906 1256 aa14.15□□□□□ -0.14
SMAD3-205ENST00000558428 JAKMIP3Q5VZ66 844 aa14.15□□□□□ -0.14
SMAD3-205ENST00000558428 PCNX4Q63HM2 1172 aa14.15□□□□□ -0.14
SMAD3-205ENST00000558428 XRRA1Q6P2D8 792 aa14.15□□□□□ -0.14
SMAD3-205ENST00000558428 CCDC62Q6P9F0 684 aa14.15□□□□□ -0.14
SMAD3-205ENST00000558428 PCSK9Q8NBP7 692 aaKnown RBP14.15□□□□□ -0.14
SMAD3-205ENST00000558428 DPF3Q92784 378 aa14.15□□□□□ -0.14
SMAD3-205ENST00000558428 FERMT2Q96AC1 680 aa14.15□□□□□ -0.14
SMAD3-205ENST00000558428 ZSCAN31Q96LW9 406 aaPredicted RBP14.15□□□□□ -0.14
SMAD3-205ENST00000558428 AIFM3Q96NN9 605 aa14.15□□□□□ -0.14
SMAD3-205ENST00000558428 TSEN34Q9BSV6 310 aaKnown RBP14.15□□□□□ -0.14
SMAD3-205ENST00000558428 ANO3Q9BYT9 981 aa14.15□□□□□ -0.14
SMAD3-205ENST00000558428 TMEM260Q9NX78 707 aa14.15□□□□□ -0.14
SMAD3-205ENST00000558428 RTEL1Q9NZ71 1219 aa14.15□□□□□ -0.14
SMAD3-205ENST00000558428 ORC3Q9UBD5 711 aaPredicted RBP14.15□□□□□ -0.14
SMAD3-205ENST00000558428 MRVI1Q9Y6F6 885 aa14.15□□□□□ -0.14
SMAD3-205ENST00000558428 MOXD2PA6NHM9 499 aa14.14□□□□□ -0.15
SMAD3-205ENST00000558428 CTAGE5O15320 804 aa14.14□□□□□ -0.15
SMAD3-205ENST00000558428 ATN1P54259 1190 aaPredicted RBP14.14□□□□□ -0.15
SMAD3-205ENST00000558428 NKX3-2P78367 333 aa14.14□□□□□ -0.15
SMAD3-205ENST00000558428 ST3GAL1Q11201 340 aa14.14□□□□□ -0.15
SMAD3-205ENST00000558428 FSCN1Q16658 493 aaKnown RBP14.14□□□□□ -0.15
SMAD3-205ENST00000558428 CCSAPQ6IQ19 270 aaPredicted RBP14.14□□□□□ -0.15
SMAD3-205ENST00000558428 KCNV1Q6PIU1 500 aa14.14□□□□□ -0.15
SMAD3-205ENST00000558428 CCDC83Q8IWF9 413 aa14.14□□□□□ -0.15
SMAD3-205ENST00000558428 REXO1Q8N1G1 1221 aaKnown RBP14.14□□□□□ -0.15
SMAD3-205ENST00000558428 NSUN7Q8NE18 718 aaKnown RBP14.14□□□□□ -0.15
SMAD3-205ENST00000558428 BICD2Q8TD16 824 aa14.14□□□□□ -0.15
SMAD3-205ENST00000558428 SH2B1Q9NRF2 756 aaPredicted RBP14.14□□□□□ -0.15
SMAD3-205ENST00000558428 PHF24Q9UPV7 400 aa14.14□□□□□ -0.15
SMAD3-205ENST00000558428 CEP290O15078 2479 aa14.14□□□□□ -0.15
SMAD3-205ENST00000558428 DOCK5Q9H7D0 1870 aa14.13□□□□□ -0.15
SMAD3-205ENST00000558428 A0A1W2PQ45 241 aaPredicted RBP14.13□□□□□ -0.15
SMAD3-205ENST00000558428 A0A1W2PQY0 241 aa14.13□□□□□ -0.15
SMAD3-205ENST00000558428 ADAMTS3O15072 1205 aa14.13□□□□□ -0.15
SMAD3-205ENST00000558428 ZEB2O60315 1214 aa14.13□□□□□ -0.15
SMAD3-205ENST00000558428 JAK2O60674 1132 aa14.13□□□□□ -0.15
SMAD3-205ENST00000558428 GH1P01241 217 aa14.13□□□□□ -0.15
SMAD3-205ENST00000558428 ASGR1P07306 291 aa14.13□□□□□ -0.15
SMAD3-205ENST00000558428 XBP1P17861 261 aa14.13□□□□□ -0.15
SMAD3-205ENST00000558428 CPT1AP50416 773 aa14.13□□□□□ -0.15
SMAD3-205ENST00000558428 ACLYP53396 1101 aa14.13□□□□□ -0.15
SMAD3-205ENST00000558428 BRDTQ58F21 947 aaPredicted RBP14.13□□□□□ -0.15
SMAD3-205ENST00000558428 MCTP2Q6DN12 878 aa14.13□□□□□ -0.15
SMAD3-205ENST00000558428 IL27Q8NEV9 243 aa14.13□□□□□ -0.15
SMAD3-205ENST00000558428 RASGRP4Q8TDF6 673 aa14.13□□□□□ -0.15
SMAD3-205ENST00000558428 WASF1Q92558 559 aa14.13□□□□□ -0.15
SMAD3-205ENST00000558428 INPP4AQ96PE3 977 aaPredicted RBP14.13□□□□□ -0.15
SMAD3-205ENST00000558428 DDX41Q9UJV9 622 aaKnown RBP14.13□□□□□ -0.15
SMAD3-205ENST00000558428 FIBPO43427 364 aa14.12□□□□□ -0.15
SMAD3-205ENST00000558428 EVI5O60447 810 aa14.12□□□□□ -0.15
SMAD3-205ENST00000558428 TGFB3P10600 412 aa14.12□□□□□ -0.15
SMAD3-205ENST00000558428 FDPSP14324 419 aaKnown RBP14.12□□□□□ -0.15
SMAD3-205ENST00000558428 ICAM3P32942 547 aa14.12□□□□□ -0.15
SMAD3-205ENST00000558428 LRRC26Q2I0M4 334 aa14.12□□□□□ -0.15
SMAD3-205ENST00000558428 NLRX1Q86UT6 975 aa14.12□□□□□ -0.15
SMAD3-205ENST00000558428 FAM177A1Q8N128 213 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms