RNA–Protein interactions for RNA: ENST00000558240.1

CDK12-203, Transcript of cyclin dependent kinase 12, humanhuman

TSL 4

Gene CDK12, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-203ENST00000558240 UBE2Q1Q7Z7E8 422 aa13.78□□□□□ -0.2
CDK12-203ENST00000558240 CCDC83Q8IWF9 413 aa13.78□□□□□ -0.2
CDK12-203ENST00000558240 IL31RAQ8NI17 732 aa13.78□□□□□ -0.2
CDK12-203ENST00000558240 WDR11Q9BZH6 1224 aa13.78□□□□□ -0.2
CDK12-203ENST00000558240 XPNPEP3Q9NQH7 507 aa13.78□□□□□ -0.2
CDK12-203ENST00000558240 GNEQ9Y223 722 aaKnown RBP13.78□□□□□ -0.2
CDK12-203ENST00000558240 TNRC18O15417 2968 aaPredicted RBP13.77□□□□□ -0.2
CDK12-203ENST00000558240 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.77□□□□□ -0.21
CDK12-203ENST00000558240 DNM1LO00429 736 aa13.77□□□□□ -0.21
CDK12-203ENST00000558240 NKRFO15226 690 aaKnown RBP eCLIP13.77□□□□□ -0.21
CDK12-203ENST00000558240 ADCY6O43306 1168 aa13.77□□□□□ -0.21
CDK12-203ENST00000558240 CD2BP2O95400 341 aaKnown RBP13.77□□□□□ -0.21
CDK12-203ENST00000558240 SMPD1P17405 629 aa13.77□□□□□ -0.21
CDK12-203ENST00000558240 MNX1P50219 401 aaPredicted RBP13.77□□□□□ -0.21
CDK12-203ENST00000558240 GJA9P57773 515 aa13.77□□□□□ -0.21
CDK12-203ENST00000558240 NKX3-2P78367 333 aa13.77□□□□□ -0.21
CDK12-203ENST00000558240 MRPS9P82933 396 aaKnown RBP13.77□□□□□ -0.21
CDK12-203ENST00000558240 TTLL4Q14679 1199 aa13.77□□□□□ -0.21
CDK12-203ENST00000558240 CCDC62Q6P9F0 684 aa13.77□□□□□ -0.21
CDK12-203ENST00000558240 KCNV1Q6PIU1 500 aa13.77□□□□□ -0.21
CDK12-203ENST00000558240 SEPT14Q6ZU15 432 aa13.77□□□□□ -0.21
CDK12-203ENST00000558240 RNF180Q86T96 592 aa13.77□□□□□ -0.21
CDK12-203ENST00000558240 REXO1Q8N1G1 1221 aaKnown RBP13.77□□□□□ -0.21
CDK12-203ENST00000558240 TMX3Q96JJ7 454 aa13.77□□□□□ -0.21
CDK12-203ENST00000558240 AIFM3Q96NN9 605 aa13.77□□□□□ -0.21
CDK12-203ENST00000558240 UPF3AQ9H1J1 476 aaKnown RBP13.77□□□□□ -0.21
CDK12-203ENST00000558240 SPC25Q9HBM1 224 aa13.77□□□□□ -0.21
CDK12-203ENST00000558240 PCDHA4Q9UN74 947 aa13.77□□□□□ -0.21
CDK12-203ENST00000558240 SYNRGQ9UMZ2 1314 aa13.76□□□□□ -0.21
CDK12-203ENST00000558240 JAK2O60674 1132 aa13.76□□□□□ -0.21
CDK12-203ENST00000558240 ADAMTS4O75173 837 aa13.76□□□□□ -0.21
CDK12-203ENST00000558240 RGS20O76081 388 aa13.76□□□□□ -0.21
CDK12-203ENST00000558240 FARP2O94887 1054 aaPredicted RBP13.76□□□□□ -0.21
CDK12-203ENST00000558240 TGFB3P10600 412 aa13.76□□□□□ -0.21
CDK12-203ENST00000558240 HMGN5P82970 282 aaKnown RBP13.76□□□□□ -0.21
CDK12-203ENST00000558240 LRRC41Q15345 812 aa13.76□□□□□ -0.21
CDK12-203ENST00000558240 JAKMIP3Q5VZ66 844 aa13.76□□□□□ -0.21
CDK12-203ENST00000558240 NECAB2Q7Z6G3 386 aa13.76□□□□□ -0.21
CDK12-203ENST00000558240 DAGLBQ8NCG7 672 aa13.76□□□□□ -0.21
CDK12-203ENST00000558240 KLHDC9Q8NEP7 349 aa13.76□□□□□ -0.21
CDK12-203ENST00000558240 LENG1Q96BZ8 264 aaPredicted RBP13.76□□□□□ -0.21
CDK12-203ENST00000558240 ALG1Q9BT22 464 aa13.76□□□□□ -0.21
CDK12-203ENST00000558240 PHF20Q9BVI0 1012 aa13.76□□□□□ -0.21
CDK12-203ENST00000558240 ANO3Q9BYT9 981 aa13.76□□□□□ -0.21
CDK12-203ENST00000558240 PDE4DIPQ5VU43 2346 aa13.76□□□□□ -0.21
CDK12-203ENST00000558240 DOCK5Q9H7D0 1870 aa13.76□□□□□ -0.21
CDK12-203ENST00000558240 DYNC1LI2O43237 492 aaPredicted RBP13.75□□□□□ -0.21
CDK12-203ENST00000558240 PGK1P00558 417 aa13.75□□□□□ -0.21
CDK12-203ENST00000558240 TXNP10599 105 aaKnown RBP13.75□□□□□ -0.21
CDK12-203ENST00000558240 CST5P28325 142 aaPredicted RBP13.75□□□□□ -0.21
CDK12-203ENST00000558240 ICAM3P32942 547 aa13.75□□□□□ -0.21
CDK12-203ENST00000558240 SREBF1P36956 1147 aa13.75□□□□□ -0.21
CDK12-203ENST00000558240 NPY5RQ15761 445 aa13.75□□□□□ -0.21
CDK12-203ENST00000558240 GNPTABQ3T906 1256 aa13.75□□□□□ -0.21
CDK12-203ENST00000558240 TMEM63BQ5T3F8 832 aa13.75□□□□□ -0.21
CDK12-203ENST00000558240 TLK2Q86UE8 772 aa13.75□□□□□ -0.21
CDK12-203ENST00000558240 BLIDQ8IZY5 108 aa13.75□□□□□ -0.21
CDK12-203ENST00000558240 PAWRQ96IZ0 340 aaKnown RBP13.75□□□□□ -0.21
CDK12-203ENST00000558240 INPP4AQ96PE3 977 aaPredicted RBP13.75□□□□□ -0.21
CDK12-203ENST00000558240 TSEN34Q9BSV6 310 aaKnown RBP13.75□□□□□ -0.21
CDK12-203ENST00000558240 AP5M1Q9H0R1 490 aa13.75□□□□□ -0.21
CDK12-203ENST00000558240 TMEM260Q9NX78 707 aa13.75□□□□□ -0.21
CDK12-203ENST00000558240 DDX41Q9UJV9 622 aaKnown RBP13.75□□□□□ -0.21
CDK12-203ENST00000558240 KBTBD13C9JR72 458 aa13.74□□□□□ -0.21
CDK12-203ENST00000558240 M0R2N6 131 aa13.74□□□□□ -0.21
CDK12-203ENST00000558240 ADAMTS3O15072 1205 aa13.74□□□□□ -0.21
CDK12-203ENST00000558240 DTNBO60941 627 aa13.74□□□□□ -0.21
CDK12-203ENST00000558240 ARIH2O95376 493 aa13.74□□□□□ -0.21
CDK12-203ENST00000558240 C6orf222P0C671 652 aaPredicted RBP13.74□□□□□ -0.21
CDK12-203ENST00000558240 COL6A1P12109 1028 aa13.74□□□□□ -0.21
CDK12-203ENST00000558240 GJC2Q5T442 439 aaPredicted RBP13.74□□□□□ -0.21
CDK12-203ENST00000558240 NLRX1Q86UT6 975 aa13.74□□□□□ -0.21
CDK12-203ENST00000558240 PCSK9Q8NBP7 692 aaKnown RBP13.74□□□□□ -0.21
CDK12-203ENST00000558240 GPRASP2Q96D09 838 aa13.74□□□□□ -0.21
CDK12-203ENST00000558240 PGBD1Q96JS3 809 aa13.74□□□□□ -0.21
CDK12-203ENST00000558240 RTEL1Q9NZ71 1219 aa13.74□□□□□ -0.21
CDK12-203ENST00000558240 KCNJ14Q9UNX9 436 aa13.74□□□□□ -0.21
CDK12-203ENST00000558240 UBIAD1Q9Y5Z9 338 aa13.74□□□□□ -0.21
CDK12-203ENST00000558240 MRVI1Q9Y6F6 885 aa13.74□□□□□ -0.21
CDK12-203ENST00000558240 MOXD2PA6NHM9 499 aa13.73□□□□□ -0.21
CDK12-203ENST00000558240 SPATA31C2B4DYI2 1134 aa13.73□□□□□ -0.21
CDK12-203ENST00000558240 CTAGE5O15320 804 aa13.73□□□□□ -0.21
CDK12-203ENST00000558240 MAFGO15525 162 aa13.73□□□□□ -0.21
CDK12-203ENST00000558240 FIBPO43427 364 aa13.73□□□□□ -0.21
CDK12-203ENST00000558240 CYP3A4P08684 503 aa13.73□□□□□ -0.21
CDK12-203ENST00000558240 ARHGAP4P98171 946 aa13.73□□□□□ -0.21
CDK12-203ENST00000558240 TRIM29Q14134 588 aa13.73□□□□□ -0.21
CDK12-203ENST00000558240 FSCN1Q16658 493 aaKnown RBP13.73□□□□□ -0.21
CDK12-203ENST00000558240 LY6KQ17RY6 165 aa13.73□□□□□ -0.21
CDK12-203ENST00000558240 GNASQ5JWF2 1037 aa13.73□□□□□ -0.21
CDK12-203ENST00000558240 CCSAPQ6IQ19 270 aaPredicted RBP13.73□□□□□ -0.21
CDK12-203ENST00000558240 DIS3LQ8TF46 1054 aaKnown RBP13.73□□□□□ -0.21
CDK12-203ENST00000558240 CRYGNQ8WXF5 182 aa13.73□□□□□ -0.21
CDK12-203ENST00000558240 EMID1Q96A84 441 aaPredicted RBP13.73□□□□□ -0.21
CDK12-203ENST00000558240 ZFP91Q96JP5 570 aaPredicted RBP13.73□□□□□ -0.21
CDK12-203ENST00000558240 CDHR1Q96JP9 859 aa13.73□□□□□ -0.21
CDK12-203ENST00000558240 SENP7Q9BQF6 1050 aa13.73□□□□□ -0.21
CDK12-203ENST00000558240 C11orf49Q9H6J7 331 aa13.73□□□□□ -0.21
CDK12-203ENST00000558240 JADE2Q9NQC1 790 aa13.73□□□□□ -0.21
CDK12-203ENST00000558240 PHF24Q9UPV7 400 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms