RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 STK36Q9NRP7 1315 aa10.41□□□□□ -0.74
CHD8-214ENST00000557727 MEIS2O14770 477 aa10.41□□□□□ -0.74
CHD8-214ENST00000557727 JAK2O60674 1132 aa10.41□□□□□ -0.74
CHD8-214ENST00000557727 SCG2P13521 617 aa10.41□□□□□ -0.74
CHD8-214ENST00000557727 ELNP15502 786 aa10.41□□□□□ -0.74
CHD8-214ENST00000557727 CYP2B6P20813 491 aa10.41□□□□□ -0.74
CHD8-214ENST00000557727 RGS2P41220 211 aa10.41□□□□□ -0.74
CHD8-214ENST00000557727 SLC4A3P48751 1232 aa10.41□□□□□ -0.74
CHD8-214ENST00000557727 RPS6P62753 249 aaKnown RBP10.41□□□□□ -0.74
CHD8-214ENST00000557727 TRIM32Q13049 653 aa10.41□□□□□ -0.74
CHD8-214ENST00000557727 BAATQ14032 418 aaPredicted RBP10.41□□□□□ -0.74
CHD8-214ENST00000557727 NPY5RQ15761 445 aa10.41□□□□□ -0.74
CHD8-214ENST00000557727 PKN2Q16513 984 aaKnown RBP10.41□□□□□ -0.74
CHD8-214ENST00000557727 MAP3K21Q5TCX8 1036 aa10.41□□□□□ -0.74
CHD8-214ENST00000557727 WDR78Q5VTH9 848 aa10.41□□□□□ -0.74
CHD8-214ENST00000557727 SMARCC2Q8TAQ2 1214 aa10.41□□□□□ -0.74
CHD8-214ENST00000557727 PXYLP1Q8TE99 480 aa10.41□□□□□ -0.74
CHD8-214ENST00000557727 TMX3Q96JJ7 454 aa10.41□□□□□ -0.74
CHD8-214ENST00000557727 MAML3Q96JK9 1138 aa10.41□□□□□ -0.74
CHD8-214ENST00000557727 MAF1Q9H063 256 aa10.41□□□□□ -0.74
CHD8-214ENST00000557727 BARHL2Q9NY43 387 aa10.41□□□□□ -0.74
CHD8-214ENST00000557727 DIS3Q9Y2L1 958 aaKnown RBP10.41□□□□□ -0.74
CHD8-214ENST00000557727 CTDP1Q9Y5B0 961 aaPredicted RBP10.41□□□□□ -0.74
CHD8-214ENST00000557727 PFASO15067 1338 aa10.4□□□□□ -0.74
CHD8-214ENST00000557727 FRMPD4Q14CM0 1322 aa10.4□□□□□ -0.74
CHD8-214ENST00000557727 ADCY3O60266 1144 aa10.4□□□□□ -0.74
CHD8-214ENST00000557727 HOXD10P28358 340 aa10.4□□□□□ -0.74
CHD8-214ENST00000557727 KCTD2Q14681 263 aa10.4□□□□□ -0.74
CHD8-214ENST00000557727 MAMDC4Q6UXC1 1216 aa10.4□□□□□ -0.74
CHD8-214ENST00000557727 CCDC83Q8IWF9 413 aa10.4□□□□□ -0.74
CHD8-214ENST00000557727 SYTL5Q8TDW5 730 aaPredicted RBP10.4□□□□□ -0.74
CHD8-214ENST00000557727 MORC4Q8TE76 937 aa10.4□□□□□ -0.74
CHD8-214ENST00000557727 ARMC5Q96C12 935 aa10.4□□□□□ -0.74
CHD8-214ENST00000557727 ZSCAN31Q96LW9 406 aaPredicted RBP10.4□□□□□ -0.74
CHD8-214ENST00000557727 SLC26A6Q9BXS9 759 aa10.4□□□□□ -0.74
CHD8-214ENST00000557727 KATNBL1Q9H079 304 aa10.4□□□□□ -0.74
CHD8-214ENST00000557727 SH2B1Q9NRF2 756 aaPredicted RBP10.4□□□□□ -0.74
CHD8-214ENST00000557727 MRPL11Q9Y3B7 192 aaKnown RBP10.4□□□□□ -0.74
CHD8-214ENST00000557727 IVNS1ABPQ9Y6Y0 642 aa10.4□□□□□ -0.74
CHD8-214ENST00000557727 WDR81Q562E7 1941 aa10.39□□□□□ -0.75
CHD8-214ENST00000557727 ESYT2A0FGR8 921 aa10.39□□□□□ -0.75
CHD8-214ENST00000557727 PTPDC1A2A3K4 754 aa10.39□□□□□ -0.75
CHD8-214ENST00000557727 hCG_1984214I3L0E3 225 aa10.39□□□□□ -0.75
CHD8-214ENST00000557727 PIK3CDO00329 1044 aa10.39□□□□□ -0.75
CHD8-214ENST00000557727 EDNRBP24530 442 aa10.39□□□□□ -0.75
CHD8-214ENST00000557727 CLK2P49760 499 aaKnown RBP10.39□□□□□ -0.75
CHD8-214ENST00000557727 CUL4AQ13619 759 aa10.39□□□□□ -0.75
CHD8-214ENST00000557727 ARHGEF6Q15052 776 aa10.39□□□□□ -0.75
CHD8-214ENST00000557727 OLFML2BQ68BL8 750 aa10.39□□□□□ -0.75
CHD8-214ENST00000557727 NSMFQ6X4W1 530 aa10.39□□□□□ -0.75
CHD8-214ENST00000557727 RNF207Q6ZRF8 634 aa10.39□□□□□ -0.75
CHD8-214ENST00000557727 HEATR3Q7Z4Q2 680 aa10.39□□□□□ -0.75
CHD8-214ENST00000557727 CCAR1Q8IX12 1150 aaKnown RBP10.39□□□□□ -0.75
CHD8-214ENST00000557727 ANKRD35Q8N283 1001 aa10.39□□□□□ -0.75
CHD8-214ENST00000557727 ZNF713Q8N859 430 aaPredicted RBP10.39□□□□□ -0.75
CHD8-214ENST00000557727 TRPV1Q8NER1 839 aa10.39□□□□□ -0.75
CHD8-214ENST00000557727 SH3TC2Q8TF17 1288 aa10.39□□□□□ -0.75
CHD8-214ENST00000557727 GJB4Q9NTQ9 266 aa10.39□□□□□ -0.75
CHD8-214ENST00000557727 SEC63Q9UGP8 760 aaKnown RBP10.39□□□□□ -0.75
CHD8-214ENST00000557727 RPTORQ8N122 1335 aa10.38□□□□□ -0.75
CHD8-214ENST00000557727 M0R2N6 131 aa10.38□□□□□ -0.75
CHD8-214ENST00000557727 EDIL3O43854 480 aa10.38□□□□□ -0.75
CHD8-214ENST00000557727 DEXIO95424 95 aa10.38□□□□□ -0.75
CHD8-214ENST00000557727 SNAI1O95863 264 aaPredicted RBP10.38□□□□□ -0.75
CHD8-214ENST00000557727 CYBAP13498 195 aa10.38□□□□□ -0.75
CHD8-214ENST00000557727 HOXA13P31271 388 aaPredicted RBP10.38□□□□□ -0.75
CHD8-214ENST00000557727 GRK4P32298 578 aa10.38□□□□□ -0.75
CHD8-214ENST00000557727 CYP2C19P33261 490 aa10.38□□□□□ -0.75
CHD8-214ENST00000557727 MCM2P49736 904 aa10.38□□□□□ -0.75
CHD8-214ENST00000557727 SSRP1Q08945 709 aaKnown RBP10.38□□□□□ -0.75
CHD8-214ENST00000557727 USP17L6PQ6QN14 398 aa10.38□□□□□ -0.75
CHD8-214ENST00000557727 DPP9Q86TI2 863 aa10.38□□□□□ -0.75
CHD8-214ENST00000557727 SAMD3Q8N6K7 520 aa10.38□□□□□ -0.75
CHD8-214ENST00000557727 IL31RAQ8NI17 732 aa10.38□□□□□ -0.75
CHD8-214ENST00000557727 RAET1EQ8TD07 263 aa10.38□□□□□ -0.75
CHD8-214ENST00000557727 SNX21Q969T3 373 aa10.38□□□□□ -0.75
CHD8-214ENST00000557727 ZNF333Q96JL9 665 aa10.38□□□□□ -0.75
CHD8-214ENST00000557727 TAAR1Q96RJ0 339 aa10.38□□□□□ -0.75
CHD8-214ENST00000557727 LLPHQ9BRT6 129 aaKnown RBP10.38□□□□□ -0.75
CHD8-214ENST00000557727 ZMYND12Q9H0C1 365 aa10.38□□□□□ -0.75
CHD8-214ENST00000557727 RIC8AQ9NPQ8 531 aa10.38□□□□□ -0.75
CHD8-214ENST00000557727 VPS54Q9P1Q0 977 aa10.38□□□□□ -0.75
CHD8-214ENST00000557727 SYNGAP1Q96PV0 1343 aa10.37□□□□□ -0.75
CHD8-214ENST00000557727 CPLX1O14810 134 aa10.37□□□□□ -0.75
CHD8-214ENST00000557727 CDKL5O76039 1030 aa10.37□□□□□ -0.75
CHD8-214ENST00000557727 CFBP00751 764 aa10.37□□□□□ -0.75
CHD8-214ENST00000557727 HMGCRP04035 888 aa10.37□□□□□ -0.75
CHD8-214ENST00000557727 INHAP05111 366 aa10.37□□□□□ -0.75
CHD8-214ENST00000557727 CALML3P27482 149 aa10.37□□□□□ -0.75
CHD8-214ENST00000557727 ALDH5A1P51649 535 aaPredicted RBP10.37□□□□□ -0.75
CHD8-214ENST00000557727 CACNB2Q08289 660 aaPredicted RBP10.37□□□□□ -0.75
CHD8-214ENST00000557727 TRAF1Q13077 416 aa10.37□□□□□ -0.75
CHD8-214ENST00000557727 UBE2SQ16763 222 aa10.37□□□□□ -0.75
CHD8-214ENST00000557727 TRAF7Q6Q0C0 670 aa10.37□□□□□ -0.75
CHD8-214ENST00000557727 MCF2L2Q86YR7 1114 aa10.37□□□□□ -0.75
CHD8-214ENST00000557727 MSL3Q8N5Y2 521 aaKnown RBP10.37□□□□□ -0.75
CHD8-214ENST00000557727 CRYGNQ8WXF5 182 aa10.37□□□□□ -0.75
CHD8-214ENST00000557727 DDX11Q96FC9 970 aa10.37□□□□□ -0.75
CHD8-214ENST00000557727 TINF2Q9BSI4 451 aa10.37□□□□□ -0.75
CHD8-214ENST00000557727 SH3GLB2Q9NR46 395 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms