RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 CDC42BPAQ5VT25 1732 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 TROVE2P10155 538 aaKnown RBP eCLIP9.1□□□□□ -0.95
CHD8-213ENST00000557364 MORC3Q14149 939 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 EXOC3L4Q17RC7 722 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 TSC1Q92574 1164 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 ERO1AQ96HE7 468 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 DBNDD1Q9H9R9 158 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 PARVGQ9HBI0 331 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 KCNJ14Q9UNX9 436 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 CDC42BPBQ9Y5S2 1711 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 MYO1FO00160 1098 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 NNMTP40261 264 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 MECOMQ03112 1051 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 E2F5Q15329 346 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 ZBTB33Q86T24 672 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 FARP1Q9Y4F1 1045 aaPredicted RBP9.1□□□□□ -0.95
CHD8-213ENST00000557364 PCDHB4Q9Y5E5 795 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 SFNP31947 248 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 DRP2Q13474 957 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 RNF207Q6ZRF8 634 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 UBXN2AP68543 259 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 SEMA3FQ13275 785 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 GKAP1Q5VSY0 366 aaPredicted RBP9.1□□□□□ -0.95
CHD8-213ENST00000557364 PPM1KQ8N3J5 372 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 MCUR1Q96AQ8 359 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 BRIP1Q9BX63 1249 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 EHD2Q9NZN4 543 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 KIAA1024Q9UPX6 916 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 CRB1P82279 1406 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 PASKQ96RG2 1323 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 ASB14A6NK59 587 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 ANKRD20A3Q5VUR7 823 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 DGKHQ86XP1 1220 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 DDX50Q9BQ39 737 aaKnown RBP9.1□□□□□ -0.95
CHD8-213ENST00000557364 SPZ1Q9BXG8 430 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 KIF9Q9HAQ2 790 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 STAP2Q9UGK3 403 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 MID2Q9UJV3 735 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 ABCB11O95342 1321 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 CASQ2O14958 399 aaPredicted RBP9.1□□□□□ -0.95
CHD8-213ENST00000557364 GSTA1P08263 222 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 GSTA2P09210 222 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 ADD2P35612 726 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 TSPY1Q01534 308 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 SLC38A10Q9HBR0 1119 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 MYO1AQ9UBC5 1043 aa9.1□□□□□ -0.95
CHD8-213ENST00000557364 METP08581 1390 aa9.09□□□□□ -0.95
CHD8-213ENST00000557364 SMIM23A6NLE4 172 aa9.09□□□□□ -0.95
CHD8-213ENST00000557364 KIF28PB7ZC32 967 aa9.09□□□□□ -0.95
CHD8-213ENST00000557364 PPP6R2O75170 966 aa9.09□□□□□ -0.95
CHD8-213ENST00000557364 RPN1P04843 607 aaKnown RBP9.09□□□□□ -0.95
CHD8-213ENST00000557364 TCP1P17987 556 aaKnown RBP9.09□□□□□ -0.95
CHD8-213ENST00000557364 BFSP1Q12934 665 aa9.09□□□□□ -0.95
CHD8-213ENST00000557364 TRPM1Q7Z4N2 1603 aa9.09□□□□□ -0.95
CHD8-213ENST00000557364 GTF2F1P35269 517 aaKnown RBP eCLIP9.09□□□□□ -0.95
CHD8-213ENST00000557364 PHKA1P46020 1223 aa9.09□□□□□ -0.95
CHD8-213ENST00000557364 LONRF2Q1L5Z9 754 aa9.09□□□□□ -0.95
CHD8-213ENST00000557364 ZSWIM6Q9HCJ5 1215 aa9.09□□□□□ -0.95
CHD8-213ENST00000557364 ADGRB3O60242 1522 aa9.09□□□□□ -0.95
CHD8-213ENST00000557364 CAPN2P17655 700 aa9.09□□□□□ -0.95
CHD8-213ENST00000557364 DDX5P17844 614 aaKnown RBP9.09□□□□□ -0.95
CHD8-213ENST00000557364 MNAT1P51948 309 aa9.09□□□□□ -0.95
CHD8-213ENST00000557364 RAD51AP2Q09MP3 1159 aa9.09□□□□□ -0.95
CHD8-213ENST00000557364 ARL6IP4Q66PJ3 421 aaKnown RBP9.09□□□□□ -0.95
CHD8-213ENST00000557364 U2AF1L4Q8WU68 220 aaKnown RBP9.09□□□□□ -0.95
CHD8-213ENST00000557364 DHX38Q92620 1227 aaKnown RBP9.09□□□□□ -0.95
CHD8-213ENST00000557364 KIAA1468Q9P260 1216 aa9.09□□□□□ -0.95
CHD8-213ENST00000557364 H2AFZP0C0S5 128 aa9.09□□□□□ -0.95
CHD8-213ENST00000557364 FKBP3Q00688 224 aaKnown RBP9.09□□□□□ -0.95
CHD8-213ENST00000557364 KRT76Q01546 638 aa9.09□□□□□ -0.95
CHD8-213ENST00000557364 H2AFVQ71UI9 128 aa9.09□□□□□ -0.95
CHD8-213ENST00000557364 SLC16A10Q8TF71 515 aa9.09□□□□□ -0.95
CHD8-213ENST00000557364 COL15A1P39059 1388 aa9.09□□□□□ -0.95
CHD8-213ENST00000557364 BRINP3Q76B58 766 aa9.09□□□□□ -0.95
CHD8-213ENST00000557364 SKA2Q8WVK7 121 aaPredicted RBP9.09□□□□□ -0.95
CHD8-213ENST00000557364 MYL10Q9BUA6 226 aa9.09□□□□□ -0.95
CHD8-213ENST00000557364 MXD3Q9BW11 206 aa9.09□□□□□ -0.95
CHD8-213ENST00000557364 KATNAL1Q9BW62 490 aa9.09□□□□□ -0.95
CHD8-213ENST00000557364 FTOQ9C0B1 505 aaKnown RBP eCLIP9.09□□□□□ -0.95
CHD8-213ENST00000557364 MAPK8IP1Q9UQF2 711 aa9.09□□□□□ -0.95
CHD8-213ENST00000557364 A0A1W2PQ27 194 aa9.09□□□□□ -0.95
CHD8-213ENST00000557364 A0A1W2PQ64 194 aa9.09□□□□□ -0.95
CHD8-213ENST00000557364 A0A1W2PQD8 194 aa9.09□□□□□ -0.95
CHD8-213ENST00000557364 DPYSL4O14531 572 aa9.09□□□□□ -0.95
CHD8-213ENST00000557364 RNF40O75150 1001 aa9.09□□□□□ -0.95
CHD8-213ENST00000557364 RPLP2P05387 115 aaKnown RBP9.09□□□□□ -0.95
CHD8-213ENST00000557364 SREBF2Q12772 1141 aa9.09□□□□□ -0.95
CHD8-213ENST00000557364 TADA2BQ86TJ2 420 aa9.09□□□□□ -0.95
CHD8-213ENST00000557364 UBE2Q2Q8WVN8 375 aa9.09□□□□□ -0.95
CHD8-213ENST00000557364 GJD4Q96KN9 370 aaPredicted RBP9.09□□□□□ -0.95
CHD8-213ENST00000557364 CDHR2Q9BYE9 1310 aa9.09□□□□□ -0.95
CHD8-213ENST00000557364 MCF2LO15068 1137 aa9.08□□□□□ -0.96
CHD8-213ENST00000557364 FCER1AP12319 257 aa9.08□□□□□ -0.96
CHD8-213ENST00000557364 LIFRP42702 1097 aa9.08□□□□□ -0.96
CHD8-213ENST00000557364 SH3BGRP55822 239 aaPredicted RBP9.08□□□□□ -0.96
CHD8-213ENST00000557364 CEP85LQ5SZL2 805 aa9.08□□□□□ -0.96
CHD8-213ENST00000557364 GINM1Q9NU53 330 aa9.08□□□□□ -0.96
CHD8-213ENST00000557364 TAB2Q9NYJ8 693 aa9.08□□□□□ -0.96
CHD8-213ENST00000557364 ATF5Q9Y2D1 282 aaPredicted RBP9.08□□□□□ -0.96
CHD8-213ENST00000557364 PTGDRQ13258 359 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms