RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 CABYRO75952 493 aa14.34□□□□□ -0.11
SLIRP-209ENST00000557342 ASGR1P07306 291 aa14.34□□□□□ -0.11
SLIRP-209ENST00000557342 CPT1AP50416 773 aa14.34□□□□□ -0.11
SLIRP-209ENST00000557342 ADCY7P51828 1080 aa14.34□□□□□ -0.11
SLIRP-209ENST00000557342 ATN1P54259 1190 aaPredicted RBP14.34□□□□□ -0.11
SLIRP-209ENST00000557342 SNX17Q15036 470 aa14.34□□□□□ -0.11
SLIRP-209ENST00000557342 GNPTABQ3T906 1256 aa14.34□□□□□ -0.11
SLIRP-209ENST00000557342 C1orf53Q5VUE5 145 aa14.34□□□□□ -0.11
SLIRP-209ENST00000557342 XRRA1Q6P2D8 792 aa14.34□□□□□ -0.11
SLIRP-209ENST00000557342 C7orf61Q8IZ16 206 aa14.34□□□□□ -0.11
SLIRP-209ENST00000557342 OR6J1Q8NGC5 347 aa14.34□□□□□ -0.11
SLIRP-209ENST00000557342 FERMT2Q96AC1 680 aa14.34□□□□□ -0.11
SLIRP-209ENST00000557342 SLC26A6Q9BXS9 759 aa14.34□□□□□ -0.11
SLIRP-209ENST00000557342 SLKQ9H2G2 1235 aaPredicted RBP14.34□□□□□ -0.11
SLIRP-209ENST00000557342 NCOA5Q9HCD5 579 aaKnown RBP14.34□□□□□ -0.11
SLIRP-209ENST00000557342 RIC8AQ9NPQ8 531 aa14.34□□□□□ -0.11
SLIRP-209ENST00000557342 STARD7Q9NQZ5 370 aa14.34□□□□□ -0.11
SLIRP-209ENST00000557342 MRVI1Q9Y6F6 885 aa14.34□□□□□ -0.11
SLIRP-209ENST00000557342 MKI67P46013 3256 aaKnown RBP14.34□□□□□ -0.11
SLIRP-209ENST00000557342 ELP1O95163 1332 aa14.34□□□□□ -0.11
SLIRP-209ENST00000557342 SMCO2A6NFE2 343 aa14.33□□□□□ -0.12
SLIRP-209ENST00000557342 CDKL5O76039 1030 aa14.33□□□□□ -0.12
SLIRP-209ENST00000557342 FOSP01100 380 aaPredicted RBP14.33□□□□□ -0.12
SLIRP-209ENST00000557342 GH1P01241 217 aa14.33□□□□□ -0.12
SLIRP-209ENST00000557342 TGFB3P10600 412 aa14.33□□□□□ -0.12
SLIRP-209ENST00000557342 NEK4P51957 841 aa14.33□□□□□ -0.12
SLIRP-209ENST00000557342 AK2P54819 239 aa14.33□□□□□ -0.12
SLIRP-209ENST00000557342 RTP1P59025 263 aa14.33□□□□□ -0.12
SLIRP-209ENST00000557342 BEX3Q00994 111 aa14.33□□□□□ -0.12
SLIRP-209ENST00000557342 SSRP1Q08945 709 aaKnown RBP14.33□□□□□ -0.12
SLIRP-209ENST00000557342 STK3Q13188 491 aa14.33□□□□□ -0.12
SLIRP-209ENST00000557342 TMEM63BQ5T3F8 832 aa14.33□□□□□ -0.12
SLIRP-209ENST00000557342 PCNX4Q63HM2 1172 aa14.33□□□□□ -0.12
SLIRP-209ENST00000557342 CCDC62Q6P9F0 684 aa14.33□□□□□ -0.12
SLIRP-209ENST00000557342 PHKBQ93100 1093 aa14.33□□□□□ -0.12
SLIRP-209ENST00000557342 LARP6Q9BRS8 491 aaKnown RBP14.33□□□□□ -0.12
SLIRP-209ENST00000557342 UPF2Q9HAU5 1272 aaKnown RBP14.33□□□□□ -0.12
SLIRP-209ENST00000557342 POLR3EQ9NVU0 708 aa14.33□□□□□ -0.12
SLIRP-209ENST00000557342 ESYT2A0FGR8 921 aa14.32□□□□□ -0.12
SLIRP-209ENST00000557342 H0YGN5 161 aa14.32□□□□□ -0.12
SLIRP-209ENST00000557342 KPNA6O60684 536 aa14.32□□□□□ -0.12
SLIRP-209ENST00000557342 ARIH2O95376 493 aa14.32□□□□□ -0.12
SLIRP-209ENST00000557342 GNA11P29992 359 aa14.32□□□□□ -0.12
SLIRP-209ENST00000557342 IRX5P78411 483 aaPredicted RBP14.32□□□□□ -0.12
SLIRP-209ENST00000557342 PKN1Q16512 942 aa14.32□□□□□ -0.12
SLIRP-209ENST00000557342 UBE2SQ16763 222 aa14.32□□□□□ -0.12
SLIRP-209ENST00000557342 LY6KQ17RY6 165 aa14.32□□□□□ -0.12
SLIRP-209ENST00000557342 MCTP2Q6DN12 878 aa14.32□□□□□ -0.12
SLIRP-209ENST00000557342 TYW1BQ6NUM6 668 aa14.32□□□□□ -0.12
SLIRP-209ENST00000557342 CCDC148Q8NFR7 591 aa14.32□□□□□ -0.12
SLIRP-209ENST00000557342 IL31RAQ8NI17 732 aa14.32□□□□□ -0.12
SLIRP-209ENST00000557342 VTI1AQ96AJ9 217 aa14.32□□□□□ -0.12
SLIRP-209ENST00000557342 SEZ6LQ9BYH1 1024 aa14.32□□□□□ -0.12
SLIRP-209ENST00000557342 C22orf23Q9BZE7 217 aa14.32□□□□□ -0.12
SLIRP-209ENST00000557342 C6orf50Q9HD87 102 aa14.32□□□□□ -0.12
SLIRP-209ENST00000557342 DDX41Q9UJV9 622 aaKnown RBP14.32□□□□□ -0.12
SLIRP-209ENST00000557342 TPCN1Q9ULQ1 816 aa14.32□□□□□ -0.12
SLIRP-209ENST00000557342 PCDHA6Q9UN73 950 aa14.32□□□□□ -0.12
SLIRP-209ENST00000557342 PCDHA8Q9Y5H6 950 aa14.32□□□□□ -0.12
SLIRP-209ENST00000557342 MROH7Q68CQ1 1323 aa14.32□□□□□ -0.12
SLIRP-209ENST00000557342 DOCK5Q9H7D0 1870 aa14.31□□□□□ -0.12
SLIRP-209ENST00000557342 A0A0U1RQG5 324 aaPredicted RBP14.31□□□□□ -0.12
SLIRP-209ENST00000557342 PFKFB2O60825 505 aa14.31□□□□□ -0.12
SLIRP-209ENST00000557342 DEXIO95424 95 aa14.31□□□□□ -0.12
SLIRP-209ENST00000557342 MRPS9P82933 396 aaKnown RBP14.31□□□□□ -0.12
SLIRP-209ENST00000557342 SCRN1Q12765 414 aa14.31□□□□□ -0.12
SLIRP-209ENST00000557342 AP3B2Q13367 1082 aa14.31□□□□□ -0.12
SLIRP-209ENST00000557342 TRIM60Q495X7 471 aa14.31□□□□□ -0.12
SLIRP-209ENST00000557342 COPS5Q92905 334 aa14.31□□□□□ -0.12
SLIRP-209ENST00000557342 ZMYND12Q9H0C1 365 aa14.31□□□□□ -0.12
SLIRP-209ENST00000557342 SH3GLB2Q9NR46 395 aa14.31□□□□□ -0.12
SLIRP-209ENST00000557342 PRKAG2Q9UGJ0 569 aa14.31□□□□□ -0.12
SLIRP-209ENST00000557342 ATP11BQ9Y2G3 1177 aa14.31□□□□□ -0.12
SLIRP-209ENST00000557342 A6NJR5 290 aa14.3□□□□□ -0.12
SLIRP-209ENST00000557342 FIBPO43427 364 aa14.3□□□□□ -0.12
SLIRP-209ENST00000557342 RGS20O76081 388 aa14.3□□□□□ -0.12
SLIRP-209ENST00000557342 PTGS1P23219 599 aa14.3□□□□□ -0.12
SLIRP-209ENST00000557342 ICAM3P32942 547 aa14.3□□□□□ -0.12
SLIRP-209ENST00000557342 RBM25P49756 843 aaKnown RBP14.3□□□□□ -0.12
SLIRP-209ENST00000557342 ARHGAP1Q07960 439 aa14.3□□□□□ -0.12
SLIRP-209ENST00000557342 LAMC2Q13753 1193 aa14.3□□□□□ -0.12
SLIRP-209ENST00000557342 CXCL17Q6UXB2 119 aa14.3□□□□□ -0.12
SLIRP-209ENST00000557342 NLRX1Q86UT6 975 aa14.3□□□□□ -0.12
SLIRP-209ENST00000557342 DHX37Q8IY37 1157 aaKnown RBP14.3□□□□□ -0.12
SLIRP-209ENST00000557342 FAM177A1Q8N128 213 aaPredicted RBP14.3□□□□□ -0.12
SLIRP-209ENST00000557342 IL27Q8NEV9 243 aa14.3□□□□□ -0.12
SLIRP-209ENST00000557342 BICD2Q8TD16 824 aa14.3□□□□□ -0.12
SLIRP-209ENST00000557342 EMID1Q96A84 441 aaPredicted RBP14.3□□□□□ -0.12
SLIRP-209ENST00000557342 CDHR1Q96JP9 859 aa14.3□□□□□ -0.12
SLIRP-209ENST00000557342 TOX2Q96NM4 488 aa14.3□□□□□ -0.12
SLIRP-209ENST00000557342 INPP4AQ96PE3 977 aaPredicted RBP14.3□□□□□ -0.12
SLIRP-209ENST00000557342 SCN10AQ9Y5Y9 1956 aa14.29□□□□□ -0.12
SLIRP-209ENST00000557342 ARVCFO00192 962 aa14.29□□□□□ -0.12
SLIRP-209ENST00000557342 MYL3P08590 195 aa14.29□□□□□ -0.12
SLIRP-209ENST00000557342 CLK2P49760 499 aaKnown RBP14.29□□□□□ -0.12
SLIRP-209ENST00000557342 ANKRD33Q7Z3H0 272 aa14.29□□□□□ -0.12
SLIRP-209ENST00000557342 MTG1Q9BT17 334 aaPredicted RBP14.29□□□□□ -0.12
SLIRP-209ENST00000557342 ANO3Q9BYT9 981 aa14.29□□□□□ -0.12
SLIRP-209ENST00000557342 RTEL1Q9NZ71 1219 aa14.29□□□□□ -0.12
SLIRP-209ENST00000557342 ZMYND8Q9ULU4 1186 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms