RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 MTG1Q9BT17 334 aaPredicted RBP19.11■□□□□ 0.65
VSX1-207ENST00000557285 BRPF3Q9ULD4 1205 aa19.11■□□□□ 0.65
VSX1-207ENST00000557285 B4GALT4O60513 344 aa19.1■□□□□ 0.65
VSX1-207ENST00000557285 GH1P01241 217 aa19.1■□□□□ 0.65
VSX1-207ENST00000557285 CYP2C18P33260 490 aa19.1■□□□□ 0.65
VSX1-207ENST00000557285 EXOSC10Q01780 885 aaKnown RBP19.1■□□□□ 0.65
VSX1-207ENST00000557285 GHRHRQ02643 423 aa19.1■□□□□ 0.65
VSX1-207ENST00000557285 APOA5Q6Q788 366 aa19.1■□□□□ 0.65
VSX1-207ENST00000557285 TMTC3Q6ZXV5 915 aa19.1■□□□□ 0.65
VSX1-207ENST00000557285 Q7L0L9 218 aa19.1■□□□□ 0.65
VSX1-207ENST00000557285 SGMS1Q86VZ5 419 aa19.1■□□□□ 0.65
VSX1-207ENST00000557285 SLC43A3Q8NBI5 491 aa19.1■□□□□ 0.65
VSX1-207ENST00000557285 SMARCC2Q8TAQ2 1214 aa19.1■□□□□ 0.65
VSX1-207ENST00000557285 PPP4R2Q9NY27 417 aa19.1■□□□□ 0.65
VSX1-207ENST00000557285 MAP3K20Q9NYL2 800 aaKnown RBP19.1■□□□□ 0.65
VSX1-207ENST00000557285 KLF18A0A0U1RQI7 1052 aa19.09■□□□□ 0.65
VSX1-207ENST00000557285 ZBTB43O43298 467 aa19.09■□□□□ 0.65
VSX1-207ENST00000557285 REC8O95072 547 aa19.09■□□□□ 0.65
VSX1-207ENST00000557285 CD4P01730 458 aa19.09■□□□□ 0.65
VSX1-207ENST00000557285 CCND2P30279 289 aa19.09■□□□□ 0.65
VSX1-207ENST00000557285 ARHGAP1Q07960 439 aa19.09■□□□□ 0.65
VSX1-207ENST00000557285 RTN1Q16799 776 aa19.09■□□□□ 0.65
VSX1-207ENST00000557285 TSGA10IPQ3SY00 556 aa19.09■□□□□ 0.65
VSX1-207ENST00000557285 USP17L6PQ6QN14 398 aa19.09■□□□□ 0.65
VSX1-207ENST00000557285 HEATR3Q7Z4Q2 680 aa19.09■□□□□ 0.65
VSX1-207ENST00000557285 GPKOWQ92917 476 aaPredicted RBP eCLIP19.09■□□□□ 0.65
VSX1-207ENST00000557285 CUL5Q93034 780 aa19.09■□□□□ 0.65
VSX1-207ENST00000557285 RNPC3Q96LT9 517 aaKnown RBP19.09■□□□□ 0.65
VSX1-207ENST00000557285 HIPK3Q9H422 1215 aa19.09■□□□□ 0.65
VSX1-207ENST00000557285 TRMT13Q9NUP7 481 aaKnown RBP19.09■□□□□ 0.65
VSX1-207ENST00000557285 DDX41Q9UJV9 622 aaKnown RBP19.09■□□□□ 0.65
VSX1-207ENST00000557285 SNX14Q9Y5W7 946 aa19.09■□□□□ 0.65
VSX1-207ENST00000557285 UMODL1Q5DID0 1318 aa19.08■□□□□ 0.65
VSX1-207ENST00000557285 A6NJR5 290 aa19.08■□□□□ 0.64
VSX1-207ENST00000557285 GOLGA8AA7E2F4 631 aa19.08■□□□□ 0.64
VSX1-207ENST00000557285 GOLGA8BA8MQT2 603 aa19.08■□□□□ 0.64
VSX1-207ENST00000557285 MMP3P08254 477 aa19.08■□□□□ 0.64
VSX1-207ENST00000557285 CSF2RAP15509 400 aa19.08■□□□□ 0.64
VSX1-207ENST00000557285 SMARCA1P28370 1054 aa19.08■□□□□ 0.64
VSX1-207ENST00000557285 HSPA4P34932 840 aa19.08■□□□□ 0.64
VSX1-207ENST00000557285 NBPF20Q3BBV1 942 aa19.08■□□□□ 0.64
VSX1-207ENST00000557285 VSIG10LQ86VR7 867 aa19.08■□□□□ 0.64
VSX1-207ENST00000557285 SAMD3Q8N6K7 520 aa19.08■□□□□ 0.64
VSX1-207ENST00000557285 ALDH8A1Q9H2A2 487 aaPredicted RBP19.08■□□□□ 0.64
VSX1-207ENST00000557285 SCN10AQ9Y5Y9 1956 aa19.07■□□□□ 0.64
VSX1-207ENST00000557285 KPNA6O60684 536 aa19.07■□□□□ 0.64
VSX1-207ENST00000557285 RGS20O76081 388 aa19.07■□□□□ 0.64
VSX1-207ENST00000557285 CENPBP07199 599 aaPredicted RBP19.07■□□□□ 0.64
VSX1-207ENST00000557285 HMGB1P09429 215 aaKnown RBP19.07■□□□□ 0.64
VSX1-207ENST00000557285 ACRP10323 421 aa19.07■□□□□ 0.64
VSX1-207ENST00000557285 CYP2C9P11712 490 aa19.07■□□□□ 0.64
VSX1-207ENST00000557285 CCL23P55773 120 aa19.07■□□□□ 0.64
VSX1-207ENST00000557285 APOBRQ0VD83 1088 aa19.07■□□□□ 0.64
VSX1-207ENST00000557285 MFSD5Q6N075 450 aa19.07■□□□□ 0.64
VSX1-207ENST00000557285 BLOC1S2Q6QNY1 142 aa19.07■□□□□ 0.64
VSX1-207ENST00000557285 DHX37Q8IY37 1157 aaKnown RBP19.07■□□□□ 0.64
VSX1-207ENST00000557285 RTEL1Q9NZ71 1219 aa19.07■□□□□ 0.64
VSX1-207ENST00000557285 CNTNAP5Q8WYK1 1306 aa19.06■□□□□ 0.64
VSX1-207ENST00000557285 UBE2SQ16763 222 aa19.06■□□□□ 0.64
VSX1-207ENST00000557285 Q6ZUG5 572 aa19.06■□□□□ 0.64
VSX1-207ENST00000557285 TMEM199Q8N511 208 aa19.06■□□□□ 0.64
VSX1-207ENST00000557285 DEFB123Q8N688 67 aa19.06■□□□□ 0.64
VSX1-207ENST00000557285 PSTPIP2Q9H939 334 aa19.06■□□□□ 0.64
VSX1-207ENST00000557285 RBM28Q9NW13 759 aaKnown RBP19.06■□□□□ 0.64
VSX1-207ENST00000557285 DOCK5Q9H7D0 1870 aa19.05■□□□□ 0.64
VSX1-207ENST00000557285 GGPS1O95749 300 aa19.05■□□□□ 0.64
VSX1-207ENST00000557285 ZNF286BP0CG31 522 aa19.05■□□□□ 0.64
VSX1-207ENST00000557285 CASTP20810 708 aaKnown RBP19.05■□□□□ 0.64
VSX1-207ENST00000557285 PPIGQ13427 754 aaKnown RBP eCLIP19.05■□□□□ 0.64
VSX1-207ENST00000557285 LAMC2Q13753 1193 aa19.05■□□□□ 0.64
VSX1-207ENST00000557285 KCNB2Q92953 911 aa19.05■□□□□ 0.64
VSX1-207ENST00000557285 BRF1Q92994 677 aa19.05■□□□□ 0.64
VSX1-207ENST00000557285 FAM161BQ96MY7 647 aa19.05■□□□□ 0.64
VSX1-207ENST00000557285 MEIS2O14770 477 aa19.04■□□□□ 0.64
VSX1-207ENST00000557285 UBA1P22314 1058 aaKnown RBP19.04■□□□□ 0.64
VSX1-207ENST00000557285 MRPS9P82933 396 aaKnown RBP19.04■□□□□ 0.64
VSX1-207ENST00000557285 SP2Q02086 613 aa19.04■□□□□ 0.64
VSX1-207ENST00000557285 DGKDQ16760 1214 aa19.04■□□□□ 0.64
VSX1-207ENST00000557285 SPATA33Q96N06 139 aa19.04■□□□□ 0.64
VSX1-207ENST00000557285 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.04■□□□□ 0.64
VSX1-207ENST00000557285 ALG1Q9BT22 464 aa19.04■□□□□ 0.64
VSX1-207ENST00000557285 NOC4LQ9BVI4 516 aaKnown RBP19.04■□□□□ 0.64
VSX1-207ENST00000557285 SEZ6LQ9BYH1 1024 aa19.04■□□□□ 0.64
VSX1-207ENST00000557285 NOD1Q9Y239 953 aa19.04■□□□□ 0.64
VSX1-207ENST00000557285 V9GY48 417 aaPredicted RBP19.04■□□□□ 0.64
VSX1-207ENST00000557285 FRMPD4Q14CM0 1322 aa19.03■□□□□ 0.64
VSX1-207ENST00000557285 CDC27P30260 824 aa19.03■□□□□ 0.64
VSX1-207ENST00000557285 METAP2P50579 478 aaKnown RBP eCLIP19.03■□□□□ 0.64
VSX1-207ENST00000557285 NAPAP54920 295 aa19.03■□□□□ 0.64
VSX1-207ENST00000557285 GNPTABQ3T906 1256 aa19.03■□□□□ 0.64
VSX1-207ENST00000557285 CELF3Q5SZQ8 465 aaKnown RBP19.03■□□□□ 0.64
VSX1-207ENST00000557285 WWC2Q6AWC2 1192 aa19.03■□□□□ 0.64
VSX1-207ENST00000557285 NFRKBQ6P4R8 1299 aa19.03■□□□□ 0.64
VSX1-207ENST00000557285 KCNV1Q6PIU1 500 aa19.03■□□□□ 0.64
VSX1-207ENST00000557285 PPTC7Q8NI37 304 aa19.03■□□□□ 0.64
VSX1-207ENST00000557285 SCLYQ96I15 445 aa19.03■□□□□ 0.64
VSX1-207ENST00000557285 BCAS3Q9H6U6 928 aa19.03■□□□□ 0.64
VSX1-207ENST00000557285 MLXIPQ9HAP2 919 aa19.03■□□□□ 0.64
VSX1-207ENST00000557285 PIK3CDO00329 1044 aa19.02■□□□□ 0.64
VSX1-207ENST00000557285 SUPT20HL2P0C7V6 817 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms