RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 MTFR1LQ9H019 292 aa7.37□□□□□ -1.23
FOXN3-215ENST00000557261 EPN3Q9H201 632 aa7.37□□□□□ -1.23
FOXN3-215ENST00000557261 TRIM39Q9HCM9 518 aa7.37□□□□□ -1.23
FOXN3-215ENST00000557261 ZBTB40Q9NUA8 1239 aa7.37□□□□□ -1.23
FOXN3-215ENST00000557261 DBF4Q9UBU7 674 aaPredicted RBP7.37□□□□□ -1.23
FOXN3-215ENST00000557261 TNPO3Q9Y5L0 923 aaKnown RBP7.37□□□□□ -1.23
FOXN3-215ENST00000557261 AFDNP55196 1824 aaKnown RBP7.36□□□□□ -1.23
FOXN3-215ENST00000557261 LY75O60449 1722 aa7.36□□□□□ -1.23
FOXN3-215ENST00000557261 DNAJC25-GNG10A0A024R161 153 aa7.36□□□□□ -1.23
FOXN3-215ENST00000557261 PGRP06401 933 aa7.36□□□□□ -1.23
FOXN3-215ENST00000557261 C6orf222P0C671 652 aaPredicted RBP7.36□□□□□ -1.23
FOXN3-215ENST00000557261 SLURP2P0DP57 97 aa7.36□□□□□ -1.23
FOXN3-215ENST00000557261 GSK3AP49840 483 aa7.36□□□□□ -1.23
FOXN3-215ENST00000557261 NEK2P51955 445 aa7.36□□□□□ -1.23
FOXN3-215ENST00000557261 CABP4P57796 275 aa7.36□□□□□ -1.23
FOXN3-215ENST00000557261 ITKQ08881 620 aa7.36□□□□□ -1.23
FOXN3-215ENST00000557261 KCNMA1Q12791 1236 aa7.36□□□□□ -1.23
FOXN3-215ENST00000557261 KRT24Q2M2I5 525 aa7.36□□□□□ -1.23
FOXN3-215ENST00000557261 SKOR2Q2VWA4 1001 aaPredicted RBP7.36□□□□□ -1.23
FOXN3-215ENST00000557261 TMEM201Q5SNT2 666 aa7.36□□□□□ -1.23
FOXN3-215ENST00000557261 FAM182BQ5T319 152 aa7.36□□□□□ -1.23
FOXN3-215ENST00000557261 WWC2Q6AWC2 1192 aa7.36□□□□□ -1.23
FOXN3-215ENST00000557261 DDX46Q7L014 1031 aaKnown RBP7.36□□□□□ -1.23
FOXN3-215ENST00000557261 ZNF227Q86WZ6 799 aa7.36□□□□□ -1.23
FOXN3-215ENST00000557261 ITPRIPQ8IWB1 547 aa7.36□□□□□ -1.23
FOXN3-215ENST00000557261 TTC5Q8N0Z6 440 aa7.36□□□□□ -1.23
FOXN3-215ENST00000557261 TMEM57Q8N5G2 664 aa7.36□□□□□ -1.23
FOXN3-215ENST00000557261 PPP1R14AQ96A00 147 aa7.36□□□□□ -1.23
FOXN3-215ENST00000557261 ELMO3Q96BJ8 720 aa7.36□□□□□ -1.23
FOXN3-215ENST00000557261 ZNF512BQ96KM6 892 aaPredicted RBP7.36□□□□□ -1.23
FOXN3-215ENST00000557261 APBA2Q99767 749 aa7.36□□□□□ -1.23
FOXN3-215ENST00000557261 AARSD1Q9BTE6 412 aaKnown RBP7.36□□□□□ -1.23
FOXN3-215ENST00000557261 ARNT2Q9HBZ2 717 aa7.36□□□□□ -1.23
FOXN3-215ENST00000557261 HYPKQ9NX55 129 aa7.36□□□□□ -1.23
FOXN3-215ENST00000557261 SLC5A4Q9NY91 659 aa7.36□□□□□ -1.23
FOXN3-215ENST00000557261 MIS18AQ9NYP9 233 aa7.36□□□□□ -1.23
FOXN3-215ENST00000557261 SNCAIPQ9Y6H5 919 aa7.36□□□□□ -1.23
FOXN3-215ENST00000557261 H7C1W4 665 aa7.35□□□□□ -1.23
FOXN3-215ENST00000557261 LINC01387J3KSC0 135 aa7.35□□□□□ -1.23
FOXN3-215ENST00000557261 RNF225M0QZC1 329 aaPredicted RBP7.35□□□□□ -1.23
FOXN3-215ENST00000557261 EXOC5O00471 708 aa7.35□□□□□ -1.23
FOXN3-215ENST00000557261 ELL2O00472 640 aaPredicted RBP7.35□□□□□ -1.23
FOXN3-215ENST00000557261 CREB3O43889 395 aa7.35□□□□□ -1.23
FOXN3-215ENST00000557261 KPNA6O60684 536 aa7.35□□□□□ -1.23
FOXN3-215ENST00000557261 UBOX5O94941 541 aa7.35□□□□□ -1.23
FOXN3-215ENST00000557261 CAPNS1P04632 268 aa7.35□□□□□ -1.23
FOXN3-215ENST00000557261 SNRPA1P09661 255 aaKnown RBP7.35□□□□□ -1.23
FOXN3-215ENST00000557261 PABPC1P11940 636 aaKnown RBP7.35□□□□□ -1.23
FOXN3-215ENST00000557261 RAG1P15918 1043 aa7.35□□□□□ -1.23
FOXN3-215ENST00000557261 GAS6Q14393 721 aa7.35□□□□□ -1.23
FOXN3-215ENST00000557261 STAT4Q14765 748 aa7.35□□□□□ -1.23
FOXN3-215ENST00000557261 ZC3H12BQ5HYM0 836 aaKnown RBP7.35□□□□□ -1.23
FOXN3-215ENST00000557261 ZNF468Q5VIY5 522 aaPredicted RBP7.35□□□□□ -1.23
FOXN3-215ENST00000557261 SCARA3Q6AZY7 606 aa7.35□□□□□ -1.23
FOXN3-215ENST00000557261 BRAPQ7Z569 592 aa7.35□□□□□ -1.23
FOXN3-215ENST00000557261 CHPFQ8IZ52 775 aa7.35□□□□□ -1.23
FOXN3-215ENST00000557261 LRRN4CLQ8ND94 238 aa7.35□□□□□ -1.23
FOXN3-215ENST00000557261 TTC8Q8TAM2 541 aa7.35□□□□□ -1.23
FOXN3-215ENST00000557261 NUDT8Q8WV74 236 aa7.35□□□□□ -1.23
FOXN3-215ENST00000557261 HOOK2Q96ED9 719 aa7.35□□□□□ -1.23
FOXN3-215ENST00000557261 MPHOSPH6Q99547 160 aaKnown RBP7.35□□□□□ -1.23
FOXN3-215ENST00000557261 DPH2Q9BQC3 489 aaPredicted RBP7.35□□□□□ -1.23
FOXN3-215ENST00000557261 DDX21Q9NR30 783 aaKnown RBP eCLIP7.35□□□□□ -1.23
FOXN3-215ENST00000557261 TACC3Q9Y6A5 838 aa7.35□□□□□ -1.23
FOXN3-215ENST00000557261 RGPD3A6NKT7 1758 aaPredicted RBP7.35□□□□□ -1.23
FOXN3-215ENST00000557261 RGPD4Q7Z3J3 1758 aa7.35□□□□□ -1.23
FOXN3-215ENST00000557261 COL15A1P39059 1388 aa7.34□□□□□ -1.23
FOXN3-215ENST00000557261 BTAF1O14981 1849 aa7.34□□□□□ -1.23
FOXN3-215ENST00000557261 BCORQ6W2J9 1755 aa7.34□□□□□ -1.23
FOXN3-215ENST00000557261 CCDC163A0A0D9SF12 145 aa7.34□□□□□ -1.23
FOXN3-215ENST00000557261 H3BRJ5 948 aa7.34□□□□□ -1.23
FOXN3-215ENST00000557261 CBFA2T2O43439 604 aa7.34□□□□□ -1.23
FOXN3-215ENST00000557261 ADH7P40394 386 aa7.34□□□□□ -1.23
FOXN3-215ENST00000557261 BAG6P46379 1132 aa7.34□□□□□ -1.23
FOXN3-215ENST00000557261 PMS1P54277 932 aaKnown RBP7.34□□□□□ -1.23
FOXN3-215ENST00000557261 HSP90AA2PQ14568 343 aaPredicted RBP7.34□□□□□ -1.23
FOXN3-215ENST00000557261 POU4F3Q15319 338 aa7.34□□□□□ -1.23
FOXN3-215ENST00000557261 DDB1Q16531 1140 aa7.34□□□□□ -1.23
FOXN3-215ENST00000557261 PPM1JQ5JR12 505 aa7.34□□□□□ -1.23
FOXN3-215ENST00000557261 DCAF15Q66K64 600 aa7.34□□□□□ -1.23
FOXN3-215ENST00000557261 APBB1IPQ7Z5R6 666 aaPredicted RBP7.34□□□□□ -1.23
FOXN3-215ENST00000557261 UBE3DQ7Z6J8 389 aa7.34□□□□□ -1.23
FOXN3-215ENST00000557261 SCUBE1Q8IWY4 988 aa7.34□□□□□ -1.23
FOXN3-215ENST00000557261 MYO1HQ8N1T3 1032 aa7.34□□□□□ -1.23
FOXN3-215ENST00000557261 IL22RA1Q8N6P7 574 aa7.34□□□□□ -1.23
FOXN3-215ENST00000557261 WDR66Q8TBY9 1149 aa7.34□□□□□ -1.23
FOXN3-215ENST00000557261 SCLYQ96I15 445 aa7.34□□□□□ -1.23
FOXN3-215ENST00000557261 HAUS7Q99871 368 aa7.34□□□□□ -1.23
FOXN3-215ENST00000557261 TEX13AQ9BXU3 409 aaPredicted RBP7.34□□□□□ -1.23
FOXN3-215ENST00000557261 MRPL4Q9BYD3 311 aaKnown RBP7.34□□□□□ -1.23
FOXN3-215ENST00000557261 AASDHPPTQ9NRN7 309 aa7.34□□□□□ -1.23
FOXN3-215ENST00000557261 TMOD3Q9NYL9 352 aa7.34□□□□□ -1.23
FOXN3-215ENST00000557261 LRP2BPQ9P2M1 347 aa7.34□□□□□ -1.23
FOXN3-215ENST00000557261 TJP2Q9UDY2 1190 aa7.34□□□□□ -1.23
FOXN3-215ENST00000557261 NDOR1Q9UHB4 597 aa7.34□□□□□ -1.23
FOXN3-215ENST00000557261 GPR39O43194 453 aa7.33□□□□□ -1.24
FOXN3-215ENST00000557261 DDX58O95786 925 aaKnown RBP7.33□□□□□ -1.24
FOXN3-215ENST00000557261 DLGAP3O95886 979 aa7.33□□□□□ -1.24
FOXN3-215ENST00000557261 NEK4P51957 841 aa7.33□□□□□ -1.24
FOXN3-215ENST00000557261 SF1Q15637 639 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms