RNA–Protein interactions for RNA: ENST00000557177.1

VRTN-202, Transcript of vertebrae development associated, humanhuman

TSL 4

Gene VRTN, Length 521 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-202ENST00000557177 CAGE1Q8TC20 777 aa16.83■□□□□ 0.28
VRTN-202ENST00000557177 EMID1Q96A84 441 aaPredicted RBP16.83■□□□□ 0.28
VRTN-202ENST00000557177 KRT23Q9C075 422 aa16.83■□□□□ 0.28
VRTN-202ENST00000557177 NOD1Q9Y239 953 aa16.83■□□□□ 0.28
VRTN-202ENST00000557177 BAIAP3O94812 1187 aa16.82■□□□□ 0.28
VRTN-202ENST00000557177 POU3F3P20264 500 aaPredicted RBP16.82■□□□□ 0.28
VRTN-202ENST00000557177 GPNMBQ14956 572 aa16.82■□□□□ 0.28
VRTN-202ENST00000557177 GDF6Q6KF10 455 aaPredicted RBP16.82■□□□□ 0.28
VRTN-202ENST00000557177 AFAP1L1Q8TED9 768 aa16.82■□□□□ 0.28
VRTN-202ENST00000557177 IL25Q9H293 177 aa16.82■□□□□ 0.28
VRTN-202ENST00000557177 CNNM2Q9H8M5 875 aa16.82■□□□□ 0.28
VRTN-202ENST00000557177 PXMP2Q9NR77 195 aa16.82■□□□□ 0.28
VRTN-202ENST00000557177 CTNNA3Q9UI47 895 aa16.82■□□□□ 0.28
VRTN-202ENST00000557177 DDX41Q9UJV9 622 aaKnown RBP16.82■□□□□ 0.28
VRTN-202ENST00000557177 EIF3JO75822 258 aaKnown RBP16.81■□□□□ 0.28
VRTN-202ENST00000557177 ARHGEF15O94989 841 aa16.81■□□□□ 0.28
VRTN-202ENST00000557177 EIF2AK2P19525 551 aaKnown RBP16.81■□□□□ 0.28
VRTN-202ENST00000557177 CASTP20810 708 aaKnown RBP16.81■□□□□ 0.28
VRTN-202ENST00000557177 HSD17B4P51659 736 aa16.81■□□□□ 0.28
VRTN-202ENST00000557177 CHMP4BP1P59074 171 aa16.81■□□□□ 0.28
VRTN-202ENST00000557177 RBL2Q08999 1139 aa16.81■□□□□ 0.28
VRTN-202ENST00000557177 SEC23AQ15436 765 aa16.81■□□□□ 0.28
VRTN-202ENST00000557177 DGKDQ16760 1214 aa16.81■□□□□ 0.28
VRTN-202ENST00000557177 ARHGEF16Q5VV41 709 aa16.81■□□□□ 0.28
VRTN-202ENST00000557177 CHST3Q7LGC8 479 aa16.81■□□□□ 0.28
VRTN-202ENST00000557177 HERC6Q8IVU3 1022 aa16.81■□□□□ 0.28
VRTN-202ENST00000557177 STAG2Q8N3U4 1231 aa16.81■□□□□ 0.28
VRTN-202ENST00000557177 CCDC155Q8N6L0 562 aa16.81■□□□□ 0.28
VRTN-202ENST00000557177 ADAMTS19Q8TE59 1207 aa16.81■□□□□ 0.28
VRTN-202ENST00000557177 DHX38Q92620 1227 aaKnown RBP16.81■□□□□ 0.28
VRTN-202ENST00000557177 MTMR8Q96EF0 704 aa16.81■□□□□ 0.28
VRTN-202ENST00000557177 UBAC1Q9BSL1 405 aa16.81■□□□□ 0.28
VRTN-202ENST00000557177 FTOQ9C0B1 505 aaKnown RBP eCLIP16.81■□□□□ 0.28
VRTN-202ENST00000557177 VAT1LQ9HCJ6 419 aa16.81■□□□□ 0.28
VRTN-202ENST00000557177 GTF2IRD1Q9UHL9 959 aa16.81■□□□□ 0.28
VRTN-202ENST00000557177 NCOR1O75376 2440 aa16.81■□□□□ 0.28
VRTN-202ENST00000557177 MYH7BA7E2Y1 1941 aa16.8■□□□□ 0.28
VRTN-202ENST00000557177 PRRC2BQ5JSZ5 2229 aaKnown RBP16.8■□□□□ 0.28
VRTN-202ENST00000557177 EPOPA6NHQ4 379 aa16.8■□□□□ 0.28
VRTN-202ENST00000557177 DHX16O60231 1041 aaKnown RBP16.8■□□□□ 0.28
VRTN-202ENST00000557177 PPP1R11O60927 126 aaPredicted RBP16.8■□□□□ 0.28
VRTN-202ENST00000557177 CFBP00751 764 aa16.8■□□□□ 0.28
VRTN-202ENST00000557177 NR3C2P08235 984 aa16.8■□□□□ 0.28
VRTN-202ENST00000557177 TAP1Q03518 808 aa16.8■□□□□ 0.28
VRTN-202ENST00000557177 IFIT1BQ5T764 474 aaKnown RBP16.8■□□□□ 0.28
VRTN-202ENST00000557177 PPTC7Q8NI37 304 aa16.8■□□□□ 0.28
VRTN-202ENST00000557177 AMNQ9BXJ7 453 aa16.8■□□□□ 0.28
VRTN-202ENST00000557177 MTCH2Q9Y6C9 303 aa16.8■□□□□ 0.28
VRTN-202ENST00000557177 COL4A4P53420 1690 aaPredicted RBP16.79■□□□□ 0.28
VRTN-202ENST00000557177 HAS3O00219 553 aa16.79■□□□□ 0.28
VRTN-202ENST00000557177 RFXAPO00287 272 aa16.79■□□□□ 0.28
VRTN-202ENST00000557177 RGS20O76081 388 aa16.79■□□□□ 0.28
VRTN-202ENST00000557177 F2P00734 622 aa16.79■□□□□ 0.28
VRTN-202ENST00000557177 HOXD8P13378 290 aaPredicted RBP16.79■□□□□ 0.28
VRTN-202ENST00000557177 SELPP16109 830 aa16.79■□□□□ 0.28
VRTN-202ENST00000557177 STOX1Q6ZVD7 989 aa16.79■□□□□ 0.28
VRTN-202ENST00000557177 LRRC8DQ7L1W4 858 aa16.79■□□□□ 0.28
VRTN-202ENST00000557177 MICALL1Q8N3F8 863 aa16.79■□□□□ 0.28
VRTN-202ENST00000557177 EXOC6Q8TAG9 804 aa16.79■□□□□ 0.28
VRTN-202ENST00000557177 UHRF1Q96T88 793 aaPredicted RBP16.79■□□□□ 0.28
VRTN-202ENST00000557177 PDCD2LQ9BRP1 358 aa16.79■□□□□ 0.28
VRTN-202ENST00000557177 TSPYL2Q9H2G4 693 aaPredicted RBP16.79■□□□□ 0.28
VRTN-202ENST00000557177 CERS4Q9HA82 394 aa16.79■□□□□ 0.28
VRTN-202ENST00000557177 MAP3K20Q9NYL2 800 aaKnown RBP16.79■□□□□ 0.28
VRTN-202ENST00000557177 HDAC6Q9UBN7 1215 aa16.79■□□□□ 0.28
VRTN-202ENST00000557177 MAD2L2Q9UI95 211 aa16.79■□□□□ 0.28
VRTN-202ENST00000557177 MRVI1Q9Y6F6 885 aa16.79■□□□□ 0.28
VRTN-202ENST00000557177 PALM3A6NDB9 673 aaPredicted RBP16.78■□□□□ 0.28
VRTN-202ENST00000557177 KLRF2D3W0D1 207 aa16.78■□□□□ 0.28
VRTN-202ENST00000557177 ZBTB5O15062 677 aa16.78■□□□□ 0.28
VRTN-202ENST00000557177 PARNO95453 639 aaKnown RBP16.78■□□□□ 0.28
VRTN-202ENST00000557177 CXCL10P02778 98 aa16.78■□□□□ 0.28
VRTN-202ENST00000557177 CKBP12277 381 aa16.78■□□□□ 0.28
VRTN-202ENST00000557177 PSEN2P49810 448 aa16.78■□□□□ 0.28
VRTN-202ENST00000557177 WDR5P61964 334 aaKnown RBP16.78■□□□□ 0.28
VRTN-202ENST00000557177 LAMC2Q13753 1193 aa16.78■□□□□ 0.28
VRTN-202ENST00000557177 CYB5R4Q7L1T6 521 aa16.78■□□□□ 0.28
VRTN-202ENST00000557177 KATNAL1Q9BW62 490 aa16.78■□□□□ 0.28
VRTN-202ENST00000557177 KIF28PB7ZC32 967 aa16.77■□□□□ 0.28
VRTN-202ENST00000557177 NBNO60934 754 aa16.77■□□□□ 0.28
VRTN-202ENST00000557177 ZNF286BP0CG31 522 aa16.77■□□□□ 0.28
VRTN-202ENST00000557177 KCNJ6P48051 423 aa16.77■□□□□ 0.28
VRTN-202ENST00000557177 TFF2Q03403 129 aa16.77■□□□□ 0.28
VRTN-202ENST00000557177 MFSD10Q14728 455 aa16.77■□□□□ 0.28
VRTN-202ENST00000557177 SLC35G1Q2M3R5 365 aa16.77■□□□□ 0.28
VRTN-202ENST00000557177 CNKSR3Q6P9H4 555 aa16.77■□□□□ 0.28
VRTN-202ENST00000557177 SAMD3Q8N6K7 520 aa16.77■□□□□ 0.28
VRTN-202ENST00000557177 C7orf31Q8N865 590 aa16.77■□□□□ 0.28
VRTN-202ENST00000557177 PCDHA1Q9Y5I3 950 aa16.77■□□□□ 0.28
VRTN-202ENST00000557177 GTPBP6O43824 516 aaPredicted RBP16.76■□□□□ 0.27
VRTN-202ENST00000557177 TLL1O43897 1013 aa16.76■□□□□ 0.27
VRTN-202ENST00000557177 BMP1P13497 986 aa16.76■□□□□ 0.27
VRTN-202ENST00000557177 GSPT1P15170 499 aaKnown RBP16.76■□□□□ 0.27
VRTN-202ENST00000557177 PTK7Q13308 1070 aa16.76■□□□□ 0.27
VRTN-202ENST00000557177 PGM5Q15124 567 aa16.76■□□□□ 0.27
VRTN-202ENST00000557177 KIAA0753Q2KHM9 967 aa16.76■□□□□ 0.27
VRTN-202ENST00000557177 TCTN1Q2MV58 587 aa16.76■□□□□ 0.27
VRTN-202ENST00000557177 TRIM71Q2Q1W2 868 aaKnown RBP16.76■□□□□ 0.27
VRTN-202ENST00000557177 MYSM1Q5VVJ2 828 aa16.76■□□□□ 0.27
VRTN-202ENST00000557177 TRAF7Q6Q0C0 670 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms