RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 NR2E3Q9Y5X4 410 aa12.28□□□□□ -0.44
LINC00239-201ENST00000556973 ALPK3Q96L96 1907 aa12.28□□□□□ -0.44
LINC00239-201ENST00000556973 FRMPD4Q14CM0 1322 aa12.28□□□□□ -0.44
LINC00239-201ENST00000556973 MYH7BA7E2Y1 1941 aa12.27□□□□□ -0.44
LINC00239-201ENST00000556973 MKI67P46013 3256 aaKnown RBP12.27□□□□□ -0.45
LINC00239-201ENST00000556973 SPDYE3A6NKU9 549 aa12.27□□□□□ -0.45
LINC00239-201ENST00000556973 CTAGE5O15320 804 aa12.27□□□□□ -0.45
LINC00239-201ENST00000556973 PFKFB2O60825 505 aa12.27□□□□□ -0.45
LINC00239-201ENST00000556973 FOSP01100 380 aaPredicted RBP12.27□□□□□ -0.45
LINC00239-201ENST00000556973 ASGR1P07306 291 aa12.27□□□□□ -0.45
LINC00239-201ENST00000556973 TGFB3P10600 412 aa12.27□□□□□ -0.45
LINC00239-201ENST00000556973 ADCY7P51828 1080 aa12.27□□□□□ -0.45
LINC00239-201ENST00000556973 C1orf53Q5VUE5 145 aa12.27□□□□□ -0.45
LINC00239-201ENST00000556973 TYW1BQ6NUM6 668 aa12.27□□□□□ -0.45
LINC00239-201ENST00000556973 XRRA1Q6P2D8 792 aa12.27□□□□□ -0.45
LINC00239-201ENST00000556973 CCDC62Q6P9F0 684 aa12.27□□□□□ -0.45
LINC00239-201ENST00000556973 FERMT2Q96AC1 680 aa12.27□□□□□ -0.45
LINC00239-201ENST00000556973 EHMT1Q9H9B1 1298 aa12.27□□□□□ -0.45
LINC00239-201ENST00000556973 PCDHA6Q9UN73 950 aa12.27□□□□□ -0.45
LINC00239-201ENST00000556973 PCDHA8Q9Y5H6 950 aa12.27□□□□□ -0.45
LINC00239-201ENST00000556973 A0A1W2PQ45 241 aaPredicted RBP12.26□□□□□ -0.45
LINC00239-201ENST00000556973 A0A1W2PQY0 241 aa12.26□□□□□ -0.45
LINC00239-201ENST00000556973 MYADML2A6NDP7 307 aa12.26□□□□□ -0.45
LINC00239-201ENST00000556973 CDKL5O76039 1030 aa12.26□□□□□ -0.45
LINC00239-201ENST00000556973 GNA11P29992 359 aa12.26□□□□□ -0.45
LINC00239-201ENST00000556973 CPT1AP50416 773 aa12.26□□□□□ -0.45
LINC00239-201ENST00000556973 ATN1P54259 1190 aaPredicted RBP12.26□□□□□ -0.45
LINC00239-201ENST00000556973 IRX5P78411 483 aaPredicted RBP12.26□□□□□ -0.45
LINC00239-201ENST00000556973 BEX3Q00994 111 aa12.26□□□□□ -0.45
LINC00239-201ENST00000556973 SCRN1Q12765 414 aa12.26□□□□□ -0.45
LINC00239-201ENST00000556973 FSCN1Q16658 493 aaKnown RBP12.26□□□□□ -0.45
LINC00239-201ENST00000556973 UBE2SQ16763 222 aa12.26□□□□□ -0.45
LINC00239-201ENST00000556973 LY6KQ17RY6 165 aa12.26□□□□□ -0.45
LINC00239-201ENST00000556973 LRRC26Q2I0M4 334 aa12.26□□□□□ -0.45
LINC00239-201ENST00000556973 GNPTABQ3T906 1256 aa12.26□□□□□ -0.45
LINC00239-201ENST00000556973 BRDTQ58F21 947 aaPredicted RBP12.26□□□□□ -0.45
LINC00239-201ENST00000556973 PCNX4Q63HM2 1172 aa12.26□□□□□ -0.45
LINC00239-201ENST00000556973 MCTP2Q6DN12 878 aa12.26□□□□□ -0.45
LINC00239-201ENST00000556973 IL27Q8NEV9 243 aa12.26□□□□□ -0.45
LINC00239-201ENST00000556973 OR6J1Q8NGC5 347 aa12.26□□□□□ -0.45
LINC00239-201ENST00000556973 IL31RAQ8NI17 732 aa12.26□□□□□ -0.45
LINC00239-201ENST00000556973 GLT1D1Q96MS3 346 aa12.26□□□□□ -0.45
LINC00239-201ENST00000556973 ZMYND12Q9H0C1 365 aa12.26□□□□□ -0.45
LINC00239-201ENST00000556973 C6orf50Q9HD87 102 aa12.26□□□□□ -0.45
LINC00239-201ENST00000556973 SH3GLB2Q9NR46 395 aa12.26□□□□□ -0.45
LINC00239-201ENST00000556973 DDX41Q9UJV9 622 aaKnown RBP12.26□□□□□ -0.45
LINC00239-201ENST00000556973 ELP1O95163 1332 aa12.26□□□□□ -0.45
LINC00239-201ENST00000556973 ESYT2A0FGR8 921 aa12.25□□□□□ -0.45
LINC00239-201ENST00000556973 A6NJR5 290 aa12.25□□□□□ -0.45
LINC00239-201ENST00000556973 KPNA6O60684 536 aa12.25□□□□□ -0.45
LINC00239-201ENST00000556973 CABYRO75952 493 aa12.25□□□□□ -0.45
LINC00239-201ENST00000556973 RGS20O76081 388 aa12.25□□□□□ -0.45
LINC00239-201ENST00000556973 ARIH2O95376 493 aa12.25□□□□□ -0.45
LINC00239-201ENST00000556973 DEXIO95424 95 aa12.25□□□□□ -0.45
LINC00239-201ENST00000556973 GH1P01241 217 aa12.25□□□□□ -0.45
LINC00239-201ENST00000556973 PTGS1P23219 599 aa12.25□□□□□ -0.45
LINC00239-201ENST00000556973 CLK2P49760 499 aaKnown RBP12.25□□□□□ -0.45
LINC00239-201ENST00000556973 MRPS9P82933 396 aaKnown RBP12.25□□□□□ -0.45
LINC00239-201ENST00000556973 SNX17Q15036 470 aa12.25□□□□□ -0.45
LINC00239-201ENST00000556973 PRPF38BQ5VTL8 546 aaKnown RBP12.25□□□□□ -0.45
LINC00239-201ENST00000556973 DHX37Q8IY37 1157 aaKnown RBP12.25□□□□□ -0.45
LINC00239-201ENST00000556973 CCDC148Q8NFR7 591 aa12.25□□□□□ -0.45
LINC00239-201ENST00000556973 VTI1AQ96AJ9 217 aa12.25□□□□□ -0.45
LINC00239-201ENST00000556973 KIF2CQ99661 725 aa12.25□□□□□ -0.45
LINC00239-201ENST00000556973 STARD7Q9NQZ5 370 aa12.25□□□□□ -0.45
LINC00239-201ENST00000556973 MRVI1Q9Y6F6 885 aa12.25□□□□□ -0.45
LINC00239-201ENST00000556973 PPFIA3O75145 1194 aa12.24□□□□□ -0.45
LINC00239-201ENST00000556973 ICAM3P32942 547 aa12.24□□□□□ -0.45
LINC00239-201ENST00000556973 RTP1P59025 263 aa12.24□□□□□ -0.45
LINC00239-201ENST00000556973 AP3B2Q13367 1082 aa12.24□□□□□ -0.45
LINC00239-201ENST00000556973 LAMC2Q13753 1193 aa12.24□□□□□ -0.45
LINC00239-201ENST00000556973 ME3Q16798 604 aa12.24□□□□□ -0.45
LINC00239-201ENST00000556973 NLRX1Q86UT6 975 aa12.24□□□□□ -0.45
LINC00239-201ENST00000556973 C7orf61Q8IZ16 206 aa12.24□□□□□ -0.45
LINC00239-201ENST00000556973 FAM177A1Q8N128 213 aaPredicted RBP12.24□□□□□ -0.45
LINC00239-201ENST00000556973 BICD2Q8TD16 824 aa12.24□□□□□ -0.45
LINC00239-201ENST00000556973 COPS5Q92905 334 aa12.24□□□□□ -0.45
LINC00239-201ENST00000556973 EMID1Q96A84 441 aaPredicted RBP12.24□□□□□ -0.45
LINC00239-201ENST00000556973 ZFP91Q96JP5 570 aaPredicted RBP12.24□□□□□ -0.45
LINC00239-201ENST00000556973 INPP4AQ96PE3 977 aaPredicted RBP12.24□□□□□ -0.45
LINC00239-201ENST00000556973 SEZ6LQ9BYH1 1024 aa12.24□□□□□ -0.45
LINC00239-201ENST00000556973 POLR3EQ9NVU0 708 aa12.24□□□□□ -0.45
LINC00239-201ENST00000556973 RTEL1Q9NZ71 1219 aa12.24□□□□□ -0.45
LINC00239-201ENST00000556973 LIMCH1Q9UPQ0 1083 aa12.24□□□□□ -0.45
LINC00239-201ENST00000556973 SPATA31C2B4DYI2 1134 aa12.23□□□□□ -0.45
LINC00239-201ENST00000556973 H0YGN5 161 aa12.23□□□□□ -0.45
LINC00239-201ENST00000556973 MAFGO15525 162 aa12.23□□□□□ -0.45
LINC00239-201ENST00000556973 FIBPO43427 364 aa12.23□□□□□ -0.45
LINC00239-201ENST00000556973 CDK7P50613 346 aa12.23□□□□□ -0.45
LINC00239-201ENST00000556973 NLRP5P59047 1200 aa12.23□□□□□ -0.45
LINC00239-201ENST00000556973 ARHGAP1Q07960 439 aa12.23□□□□□ -0.45
LINC00239-201ENST00000556973 CELF3Q5SZQ8 465 aaKnown RBP12.23□□□□□ -0.45
LINC00239-201ENST00000556973 CXCL17Q6UXB2 119 aa12.23□□□□□ -0.45
LINC00239-201ENST00000556973 NECAB1Q8N987 351 aa12.23□□□□□ -0.45
LINC00239-201ENST00000556973 CDHR1Q96JP9 859 aa12.23□□□□□ -0.45
LINC00239-201ENST00000556973 VPS54Q9P1Q0 977 aa12.23□□□□□ -0.45
LINC00239-201ENST00000556973 ATP11BQ9Y2G3 1177 aa12.23□□□□□ -0.45
LINC00239-201ENST00000556973 MROH7Q68CQ1 1323 aa12.22□□□□□ -0.45
LINC00239-201ENST00000556973 STK36Q9NRP7 1315 aa12.22□□□□□ -0.45
LINC00239-201ENST00000556973 ARVCFO00192 962 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms