RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 LZTR1Q8N653 840 aa7.65□□□□□ -1.18
HIF1A-209ENST00000556827 RCC1LQ96I51 464 aaKnown RBP7.65□□□□□ -1.18
HIF1A-209ENST00000556827 APBA2Q99767 749 aa7.65□□□□□ -1.18
HIF1A-209ENST00000556827 PRXQ9BXM0 1461 aa7.65□□□□□ -1.18
HIF1A-209ENST00000556827 HECW2Q9P2P5 1572 aa7.65□□□□□ -1.18
HIF1A-209ENST00000556827 AKT3Q9Y243 479 aa7.65□□□□□ -1.18
HIF1A-209ENST00000556827 RWDD3Q9Y3V2 267 aa7.65□□□□□ -1.18
HIF1A-209ENST00000556827 HCFC2Q9Y5Z7 792 aa7.65□□□□□ -1.18
HIF1A-209ENST00000556827 ABCA8O94911 1581 aa7.64□□□□□ -1.19
HIF1A-209ENST00000556827 ARAP3Q8WWN8 1544 aa7.64□□□□□ -1.19
HIF1A-209ENST00000556827 NPHP3-ACAD11A0A0J9YXS1 232 aa7.64□□□□□ -1.19
HIF1A-209ENST00000556827 ZC3H12DA2A288 527 aaKnown RBP7.64□□□□□ -1.19
HIF1A-209ENST00000556827 KRTAP9-7A8MTY7 169 aa7.64□□□□□ -1.19
HIF1A-209ENST00000556827 U2SURPO15042 1029 aaKnown RBP7.64□□□□□ -1.19
HIF1A-209ENST00000556827 NAT2P11245 290 aa7.64□□□□□ -1.19
HIF1A-209ENST00000556827 LIMS1P48059 325 aa7.64□□□□□ -1.19
HIF1A-209ENST00000556827 PRR5P85299 388 aa7.64□□□□□ -1.19
HIF1A-209ENST00000556827 SV2CQ496J9 727 aa7.64□□□□□ -1.19
HIF1A-209ENST00000556827 NLGN2Q8NFZ4 835 aa7.64□□□□□ -1.19
HIF1A-209ENST00000556827 UBXN4Q92575 508 aa7.64□□□□□ -1.19
HIF1A-209ENST00000556827 FAN1Q9Y2M0 1017 aa7.64□□□□□ -1.19
HIF1A-209ENST00000556827 ATP10BO94823 1461 aa7.63□□□□□ -1.19
HIF1A-209ENST00000556827 TRBV23OR9-2A0A075B6M9 112 aa7.63□□□□□ -1.19
HIF1A-209ENST00000556827 KCNH1O95259 989 aa7.63□□□□□ -1.19
HIF1A-209ENST00000556827 PAMP19021 973 aa7.63□□□□□ -1.19
HIF1A-209ENST00000556827 SERINC3Q13530 473 aa7.63□□□□□ -1.19
HIF1A-209ENST00000556827 CPNE8Q86YQ8 564 aa7.63□□□□□ -1.19
HIF1A-209ENST00000556827 SP8Q8IXZ3 490 aa7.63□□□□□ -1.19
HIF1A-209ENST00000556827 CRACR2BQ8N4Y2 399 aaPredicted RBP7.63□□□□□ -1.19
HIF1A-209ENST00000556827 FBXO41Q8TF61 875 aa7.63□□□□□ -1.19
HIF1A-209ENST00000556827 CFAP43Q8NDM7 1665 aa7.63□□□□□ -1.19
HIF1A-209ENST00000556827 IRS2Q9Y4H2 1338 aa7.62□□□□□ -1.19
HIF1A-209ENST00000556827 B8ZZF3 427 aa7.62□□□□□ -1.19
HIF1A-209ENST00000556827 NBPF6Q5VWK0 638 aa7.62□□□□□ -1.19
HIF1A-209ENST00000556827 POMZP3Q6PJE2 187 aa7.62□□□□□ -1.19
HIF1A-209ENST00000556827 NLGN1Q8N2Q7 840 aa7.62□□□□□ -1.19
HIF1A-209ENST00000556827 USP33Q8TEY7 942 aa7.62□□□□□ -1.19
HIF1A-209ENST00000556827 ALG3Q92685 438 aa7.62□□□□□ -1.19
HIF1A-209ENST00000556827 NBPF4Q96M43 638 aa7.62□□□□□ -1.19
HIF1A-209ENST00000556827 RXFP1Q9HBX9 757 aa7.62□□□□□ -1.19
HIF1A-209ENST00000556827 SIRPGQ9P1W8 387 aa7.62□□□□□ -1.19
HIF1A-209ENST00000556827 GULP1Q9UBP9 304 aa7.62□□□□□ -1.19
HIF1A-209ENST00000556827 MSRB2Q9Y3D2 182 aa7.62□□□□□ -1.19
HIF1A-209ENST00000556827 NEO1Q92859 1461 aa7.62□□□□□ -1.19
HIF1A-209ENST00000556827 CTTNBP2Q8WZ74 1663 aa7.61□□□□□ -1.19
HIF1A-209ENST00000556827 FAM221BA6H8Z2 402 aa7.61□□□□□ -1.19
HIF1A-209ENST00000556827 NOP56O00567 594 aaKnown RBP7.61□□□□□ -1.19
HIF1A-209ENST00000556827 TBX1O43435 398 aa7.61□□□□□ -1.19
HIF1A-209ENST00000556827 GLI4P10075 376 aa7.61□□□□□ -1.19
HIF1A-209ENST00000556827 IGFBP6P24592 240 aaPredicted RBP7.61□□□□□ -1.19
HIF1A-209ENST00000556827 SLC10A6Q3KNW5 377 aa7.61□□□□□ -1.19
HIF1A-209ENST00000556827 EEPD1Q7L9B9 569 aa7.61□□□□□ -1.19
HIF1A-209ENST00000556827 C20orf173Q96LM9 149 aa7.61□□□□□ -1.19
HIF1A-209ENST00000556827 LNPKQ9C0E8 428 aa7.61□□□□□ -1.19
HIF1A-209ENST00000556827 NUDT5Q9UKK9 219 aa7.61□□□□□ -1.19
HIF1A-209ENST00000556827 PLA2G2DQ9UNK4 145 aa7.61□□□□□ -1.19
HIF1A-209ENST00000556827 NCANO14594 1321 aa7.6□□□□□ -1.19
HIF1A-209ENST00000556827 A0A0G2JLL6 359 aaPredicted RBP7.6□□□□□ -1.19
HIF1A-209ENST00000556827 PRRG2O14669 202 aa7.6□□□□□ -1.19
HIF1A-209ENST00000556827 NPHS1O60500 1241 aa7.6□□□□□ -1.19
HIF1A-209ENST00000556827 ITGAVP06756 1048 aa7.6□□□□□ -1.19
HIF1A-209ENST00000556827 FBLN1P23142 703 aa7.6□□□□□ -1.19
HIF1A-209ENST00000556827 ZNF143P52747 638 aaPredicted RBP7.6□□□□□ -1.19
HIF1A-209ENST00000556827 RBM10P98175 930 aaKnown RBP7.6□□□□□ -1.19
HIF1A-209ENST00000556827 SCRN1Q12765 414 aa7.6□□□□□ -1.19
HIF1A-209ENST00000556827 LINC01356Q8N9X3 169 aa7.6□□□□□ -1.19
HIF1A-209ENST00000556827 BVESQ8NE79 360 aa7.6□□□□□ -1.19
HIF1A-209ENST00000556827 RELTQ969Z4 430 aa7.6□□□□□ -1.19
HIF1A-209ENST00000556827 RNF38Q9H0F5 515 aa7.6□□□□□ -1.19
HIF1A-209ENST00000556827 CLEC1BQ9P126 229 aa7.6□□□□□ -1.19
HIF1A-209ENST00000556827 LRP2BPQ9P2M1 347 aa7.6□□□□□ -1.19
HIF1A-209ENST00000556827 FBLN5Q9UBX5 448 aa7.6□□□□□ -1.19
HIF1A-209ENST00000556827 EMC9Q9Y3B6 208 aa7.6□□□□□ -1.19
HIF1A-209ENST00000556827 EEA1Q15075 1411 aa7.6□□□□□ -1.19
HIF1A-209ENST00000556827 POGZQ7Z3K3 1410 aa7.6□□□□□ -1.19
HIF1A-209ENST00000556827 PDPK1O15530 556 aa7.59□□□□□ -1.19
HIF1A-209ENST00000556827 NFIXQ14938 502 aa7.59□□□□□ -1.19
HIF1A-209ENST00000556827 SPATC1Q76KD6 591 aa7.59□□□□□ -1.19
HIF1A-209ENST00000556827 NETO2Q8NC67 525 aa7.59□□□□□ -1.19
HIF1A-209ENST00000556827 FEZF2Q8TBJ5 459 aa7.59□□□□□ -1.19
HIF1A-209ENST00000556827 PEX11GQ96HA9 241 aa7.59□□□□□ -1.19
HIF1A-209ENST00000556827 KRTAP4-9Q9BYQ8 210 aa7.59□□□□□ -1.19
HIF1A-209ENST00000556827 OSBPL2Q9H1P3 480 aa7.59□□□□□ -1.19
HIF1A-209ENST00000556827 SNTG2Q9NY99 539 aa7.59□□□□□ -1.19
HIF1A-209ENST00000556827 CDK11AQ9UQ88 783 aaPredicted RBP7.59□□□□□ -1.19
HIF1A-209ENST00000556827 PMF1-BGLAPU3KQ54 211 aa7.59□□□□□ -1.19
HIF1A-209ENST00000556827 PTPRMP28827 1452 aa7.59□□□□□ -1.19
HIF1A-209ENST00000556827 DENND4BO75064 1496 aaPredicted RBP7.58□□□□□ -1.2
HIF1A-209ENST00000556827 OTOL1A6NHN0 477 aaPredicted RBP7.58□□□□□ -1.2
HIF1A-209ENST00000556827 ASGR2P07307 311 aa7.58□□□□□ -1.2
HIF1A-209ENST00000556827 NCAM1P13591 858 aa7.58□□□□□ -1.2
HIF1A-209ENST00000556827 PLS3P13797 630 aa7.58□□□□□ -1.2
HIF1A-209ENST00000556827 MC3RP41968 323 aa7.58□□□□□ -1.2
HIF1A-209ENST00000556827 FOXO4P98177 505 aa7.58□□□□□ -1.2
HIF1A-209ENST00000556827 RASA3Q14644 834 aa7.58□□□□□ -1.2
HIF1A-209ENST00000556827 BMS1Q14692 1282 aaKnown RBP7.58□□□□□ -1.2
HIF1A-209ENST00000556827 CCDC144BQ3MJ40 725 aa7.58□□□□□ -1.2
HIF1A-209ENST00000556827 SOGA3Q5TF21 947 aa7.58□□□□□ -1.2
HIF1A-209ENST00000556827 WWC2Q6AWC2 1192 aa7.58□□□□□ -1.2
HIF1A-209ENST00000556827 ZNF227Q86WZ6 799 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms