RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-222	ENST00000556778	COL9A1	P20849	921 aa		10.17	□□□□□ -0.78
PRKCH-222	ENST00000556778	ALDH5A1	P51649	535 aa	Predicted RBP	10.17	□□□□□ -0.78
PRKCH-222	ENST00000556778	HSD17B4	P51659	736 aa		10.17	□□□□□ -0.78
PRKCH-222	ENST00000556778	ACVR2B	Q13705	512 aa		10.17	□□□□□ -0.78
PRKCH-222	ENST00000556778	UBE2S	Q16763	222 aa		10.17	□□□□□ -0.78
PRKCH-222	ENST00000556778	IFFO2	Q5TF58	517 aa		10.17	□□□□□ -0.78
PRKCH-222	ENST00000556778	TAPT1	Q6NXT6	567 aa		10.17	□□□□□ -0.78
PRKCH-222	ENST00000556778	MCF2L2	Q86YR7	1114 aa		10.17	□□□□□ -0.78
PRKCH-222	ENST00000556778	FBXO16	Q8IX29	292 aa	Predicted RBP	10.17	□□□□□ -0.78
PRKCH-222	ENST00000556778	TRMT44	Q8IYL2	757 aa	Known RBP	10.17	□□□□□ -0.78
PRKCH-222	ENST00000556778	IL31RA	Q8NI17	732 aa		10.17	□□□□□ -0.78
PRKCH-222	ENST00000556778	TBC1D32	Q96NH3	1257 aa		10.17	□□□□□ -0.78
PRKCH-222	ENST00000556778	TMEM260	Q9NX78	707 aa		10.17	□□□□□ -0.78
PRKCH-222	ENST00000556778	ZHX1	Q9UKY1	873 aa	Predicted RBP	10.17	□□□□□ -0.78
PRKCH-222	ENST00000556778	MYH4	Q9Y623	1939 aa		10.16	□□□□□ -0.78
PRKCH-222	ENST00000556778	PPP1R3G	B7ZBB8	358 aa		10.16	□□□□□ -0.78
PRKCH-222	ENST00000556778	GCOM1	H8Y6P7	765 aa	Predicted RBP	10.16	□□□□□ -0.78
PRKCH-222	ENST00000556778	PRPF3	O43395	683 aa	Known RBP	10.16	□□□□□ -0.78
PRKCH-222	ENST00000556778	EIF5B	O60841	1220 aa	Known RBP	10.16	□□□□□ -0.78
PRKCH-222	ENST00000556778	POLR2M	P0CAP2	368 aa		10.16	□□□□□ -0.78
PRKCH-222	ENST00000556778	IFNAR1	P17181	557 aa		10.16	□□□□□ -0.78
PRKCH-222	ENST00000556778	ADCYAP1R1	P41586	468 aa		10.16	□□□□□ -0.78
PRKCH-222	ENST00000556778	MLLT3	P42568	568 aa	Predicted RBP	10.16	□□□□□ -0.78
PRKCH-222	ENST00000556778	GJA8	P48165	433 aa		10.16	□□□□□ -0.78
PRKCH-222	ENST00000556778	RCAN1	P53805	252 aa		10.16	□□□□□ -0.78
PRKCH-222	ENST00000556778	PFKFB3	Q16875	520 aa	Predicted RBP	10.16	□□□□□ -0.78
PRKCH-222	ENST00000556778	CCDC144B	Q3MJ40	725 aa		10.16	□□□□□ -0.78
PRKCH-222	ENST00000556778	GJC2	Q5T442	439 aa	Predicted RBP	10.16	□□□□□ -0.78
PRKCH-222	ENST00000556778	DIS3L	Q8TF46	1054 aa	Known RBP	10.16	□□□□□ -0.78
PRKCH-222	ENST00000556778	PGBD1	Q96JS3	809 aa		10.16	□□□□□ -0.78
PRKCH-222	ENST00000556778	RMDN3	Q96TC7	470 aa		10.16	□□□□□ -0.78
PRKCH-222	ENST00000556778	ZBED2	Q9BTP6	218 aa		10.16	□□□□□ -0.78
PRKCH-222	ENST00000556778	SLK	Q9H2G2	1235 aa	Predicted RBP	10.16	□□□□□ -0.78
PRKCH-222	ENST00000556778	PSTPIP2	Q9H939	334 aa		10.16	□□□□□ -0.78
PRKCH-222	ENST00000556778	DDX20	Q9UHI6	824 aa	Known RBP	10.16	□□□□□ -0.78
PRKCH-222	ENST00000556778	PNMA2	Q9UL42	364 aa		10.16	□□□□□ -0.78
PRKCH-222	ENST00000556778	PLXNB2	O15031	1838 aa		10.16	□□□□□ -0.78
PRKCH-222	ENST00000556778	NID2	Q14112	1375 aa		10.15	□□□□□ -0.78
PRKCH-222	ENST00000556778	CCDC196	A0A1B0GTZ2	297 aa		10.15	□□□□□ -0.78
PRKCH-222	ENST00000556778	MYADML2	A6NDP7	307 aa		10.15	□□□□□ -0.78
PRKCH-222	ENST00000556778	SMCO2	A6NFE2	343 aa		10.15	□□□□□ -0.78
PRKCH-222	ENST00000556778	HR	O43593	1189 aa		10.15	□□□□□ -0.78
PRKCH-222	ENST00000556778	JAK2	O60674	1132 aa		10.15	□□□□□ -0.78
PRKCH-222	ENST00000556778	MYCL	P12524	364 aa	Predicted RBP	10.15	□□□□□ -0.78
PRKCH-222	ENST00000556778	FDPS	P14324	419 aa	Known RBP	10.15	□□□□□ -0.78
PRKCH-222	ENST00000556778	SMPD1	P17405	629 aa		10.15	□□□□□ -0.78
PRKCH-222	ENST00000556778	EDNRB	P24530	442 aa		10.15	□□□□□ -0.78
PRKCH-222	ENST00000556778	NAPA	P54920	295 aa		10.15	□□□□□ -0.78
PRKCH-222	ENST00000556778	GHRHR	Q02643	423 aa		10.15	□□□□□ -0.78
PRKCH-222	ENST00000556778	TSR1	Q2NL82	804 aa	Known RBP	10.15	□□□□□ -0.78
PRKCH-222	ENST00000556778	C6orf132	Q5T0Z8	1188 aa		10.15	□□□□□ -0.78
PRKCH-222	ENST00000556778	ARHGEF16	Q5VV41	709 aa		10.15	□□□□□ -0.78
PRKCH-222	ENST00000556778	MORC4	Q8TE76	937 aa		10.15	□□□□□ -0.78
PRKCH-222	ENST00000556778	SLC4A5	Q9BY07	1137 aa		10.15	□□□□□ -0.78
PRKCH-222	ENST00000556778	BCAS3	Q9H6U6	928 aa		10.15	□□□□□ -0.78
PRKCH-222	ENST00000556778	PXMP2	Q9NR77	195 aa		10.15	□□□□□ -0.78
PRKCH-222	ENST00000556778	BARHL2	Q9NY43	387 aa		10.15	□□□□□ -0.78
PRKCH-222	ENST00000556778	RTEL1	Q9NZ71	1219 aa		10.15	□□□□□ -0.78
PRKCH-222	ENST00000556778	VPS54	Q9P1Q0	977 aa		10.15	□□□□□ -0.78
PRKCH-222	ENST00000556778	CNPY2	Q9Y2B0	182 aa		10.15	□□□□□ -0.78
PRKCH-222	ENST00000556778	VPS9D1	Q9Y2B5	631 aa		10.15	□□□□□ -0.78
PRKCH-222	ENST00000556778	PARP14	Q460N5	1801 aa		10.14	□□□□□ -0.79
PRKCH-222	ENST00000556778	SYNGAP1	Q96PV0	1343 aa		10.14	□□□□□ -0.79
PRKCH-222	ENST00000556778	ASB14	A6NK59	587 aa		10.14	□□□□□ -0.79
PRKCH-222	ENST00000556778	CPLX1	O14810	134 aa		10.14	□□□□□ -0.79
PRKCH-222	ENST00000556778	SEPT4	O43236	478 aa		10.14	□□□□□ -0.79
PRKCH-222	ENST00000556778	SORBS3	O60504	671 aa		10.14	□□□□□ -0.79
PRKCH-222	ENST00000556778	RGS20	O76081	388 aa		10.14	□□□□□ -0.79
PRKCH-222	ENST00000556778	ARIH2	O95376	493 aa		10.14	□□□□□ -0.79
PRKCH-222	ENST00000556778	PGK1	P00558	417 aa		10.14	□□□□□ -0.79
PRKCH-222	ENST00000556778	SCG2	P13521	617 aa		10.14	□□□□□ -0.79
PRKCH-222	ENST00000556778	PDE4D	Q08499	809 aa		10.14	□□□□□ -0.79
PRKCH-222	ENST00000556778	SSRP1	Q08945	709 aa	Known RBP	10.14	□□□□□ -0.79
PRKCH-222	ENST00000556778	PPP2R5B	Q15173	497 aa		10.14	□□□□□ -0.79
PRKCH-222	ENST00000556778	ANKRD1	Q15327	319 aa		10.14	□□□□□ -0.79
PRKCH-222	ENST00000556778	SEPT14	Q6ZU15	432 aa		10.14	□□□□□ -0.79
PRKCH-222	ENST00000556778	MSL3	Q8N5Y2	521 aa	Known RBP	10.14	□□□□□ -0.79
PRKCH-222	ENST00000556778	SMARCC2	Q8TAQ2	1214 aa		10.14	□□□□□ -0.79
PRKCH-222	ENST00000556778	RASGRP4	Q8TDF6	673 aa		10.14	□□□□□ -0.79
PRKCH-222	ENST00000556778	NSUN6	Q8TEA1	469 aa	Known RBP	10.14	□□□□□ -0.79
PRKCH-222	ENST00000556778	COPS5	Q92905	334 aa		10.14	□□□□□ -0.79
PRKCH-222	ENST00000556778	GTF3C6	Q969F1	213 aa		10.14	□□□□□ -0.79
PRKCH-222	ENST00000556778	ABHD16B	Q9H3Z7	469 aa		10.14	□□□□□ -0.79
PRKCH-222	ENST00000556778	UPF2	Q9HAU5	1272 aa	Known RBP	10.14	□□□□□ -0.79
PRKCH-222	ENST00000556778	ADD3	Q9UEY8	706 aa	Known RBP	10.14	□□□□□ -0.79
PRKCH-222	ENST00000556778	OGDHL	Q9ULD0	1010 aa		10.14	□□□□□ -0.79
PRKCH-222	ENST00000556778	LIMCH1	Q9UPQ0	1083 aa		10.14	□□□□□ -0.79
PRKCH-222	ENST00000556778	PIK3CD	O00329	1044 aa		10.13	□□□□□ -0.79
PRKCH-222	ENST00000556778	CTAGE5	O15320	804 aa		10.13	□□□□□ -0.79
PRKCH-222	ENST00000556778	MAP3K7	O43318	606 aa		10.13	□□□□□ -0.79
PRKCH-222	ENST00000556778	NR3C2	P08235	984 aa		10.13	□□□□□ -0.79
PRKCH-222	ENST00000556778	MRPS9	P82933	396 aa	Known RBP	10.13	□□□□□ -0.79
PRKCH-222	ENST00000556778	PGM5	Q15124	567 aa		10.13	□□□□□ -0.79
PRKCH-222	ENST00000556778	RABEP1	Q15276	862 aa		10.13	□□□□□ -0.79
PRKCH-222	ENST00000556778	JAKMIP3	Q5VZ66	844 aa		10.13	□□□□□ -0.79
PRKCH-222	ENST00000556778	VSIG10L	Q86VR7	867 aa		10.13	□□□□□ -0.79
PRKCH-222	ENST00000556778	CCDC83	Q8IWF9	413 aa		10.13	□□□□□ -0.79
PRKCH-222	ENST00000556778	NSUN7	Q8NE18	718 aa	Known RBP	10.13	□□□□□ -0.79
PRKCH-222	ENST00000556778	DNER	Q8NFT8	737 aa		10.13	□□□□□ -0.79
PRKCH-222	ENST00000556778	PAWR	Q96IZ0	340 aa	Known RBP	10.13	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms