RNA–Protein interactions for RNA: ENST00000556742.1

IFT43-212, Transcript of intraflagellar transport 43, humanhuman

TSL 2 BASIC

Gene IFT43, Length 848 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-212ENST00000556742 TOX2Q96NM4 488 aa12.36□□□□□ -0.43
IFT43-212ENST00000556742 ALDH8A1Q9H2A2 487 aaPredicted RBP12.36□□□□□ -0.43
IFT43-212ENST00000556742 PRO3102Q9H379 93 aa12.36□□□□□ -0.43
IFT43-212ENST00000556742 PSTPIP2Q9H939 334 aa12.36□□□□□ -0.43
IFT43-212ENST00000556742 POLR3EQ9NVU0 708 aa12.36□□□□□ -0.43
IFT43-212ENST00000556742 NAP1L2Q9ULW6 460 aaPredicted RBP12.36□□□□□ -0.43
IFT43-212ENST00000556742 ATP11BQ9Y2G3 1177 aa12.36□□□□□ -0.43
IFT43-212ENST00000556742 SZT2Q5T011 3432 aa12.36□□□□□ -0.43
IFT43-212ENST00000556742 A0A0U1RQG5 324 aaPredicted RBP12.35□□□□□ -0.43
IFT43-212ENST00000556742 A0A1W2PPC1 479 aa12.35□□□□□ -0.43
IFT43-212ENST00000556742 hCG_1642624A0A1W2PR95 340 aa12.35□□□□□ -0.43
IFT43-212ENST00000556742 A6NJR5 290 aa12.35□□□□□ -0.43
IFT43-212ENST00000556742 ARIH2O95376 493 aa12.35□□□□□ -0.43
IFT43-212ENST00000556742 TGFB3P10600 412 aa12.35□□□□□ -0.43
IFT43-212ENST00000556742 PDIA3P30101 505 aaKnown RBP12.35□□□□□ -0.43
IFT43-212ENST00000556742 BMP8BP34820 402 aa12.35□□□□□ -0.43
IFT43-212ENST00000556742 CDK7P50613 346 aa12.35□□□□□ -0.43
IFT43-212ENST00000556742 TRIM60Q495X7 471 aa12.35□□□□□ -0.43
IFT43-212ENST00000556742 WWC2Q6AWC2 1192 aa12.35□□□□□ -0.43
IFT43-212ENST00000556742 USP17L6PQ6QN14 398 aa12.35□□□□□ -0.43
IFT43-212ENST00000556742 HEATR3Q7Z4Q2 680 aa12.35□□□□□ -0.43
IFT43-212ENST00000556742 FCHSD1Q86WN1 690 aa12.35□□□□□ -0.43
IFT43-212ENST00000556742 OR6J1Q8NGC5 347 aa12.35□□□□□ -0.43
IFT43-212ENST00000556742 EMID1Q96A84 441 aaPredicted RBP12.35□□□□□ -0.43
IFT43-212ENST00000556742 UPF3BQ9BZI7 483 aaKnown RBP12.35□□□□□ -0.43
IFT43-212ENST00000556742 GLT8D2Q9H1C3 349 aa12.35□□□□□ -0.43
IFT43-212ENST00000556742 BARHL2Q9NY43 387 aa12.35□□□□□ -0.43
IFT43-212ENST00000556742 DDX41Q9UJV9 622 aaKnown RBP12.35□□□□□ -0.43
IFT43-212ENST00000556742 V9GY48 417 aaPredicted RBP12.35□□□□□ -0.43
IFT43-212ENST00000556742 KAT6AQ92794 2004 aa12.35□□□□□ -0.43
IFT43-212ENST00000556742 WDR81Q562E7 1941 aa12.35□□□□□ -0.43
IFT43-212ENST00000556742 KPNA6O60684 536 aa12.34□□□□□ -0.43
IFT43-212ENST00000556742 RGS20O76081 388 aa12.34□□□□□ -0.43
IFT43-212ENST00000556742 GH1P01241 217 aa12.34□□□□□ -0.43
IFT43-212ENST00000556742 MYCLP12524 364 aaPredicted RBP12.34□□□□□ -0.43
IFT43-212ENST00000556742 IFNAR1P17181 557 aa12.34□□□□□ -0.43
IFT43-212ENST00000556742 NAPAP54920 295 aa12.34□□□□□ -0.43
IFT43-212ENST00000556742 TLE2Q04725 743 aa12.34□□□□□ -0.43
IFT43-212ENST00000556742 NTRK3Q16288 839 aa12.34□□□□□ -0.43
IFT43-212ENST00000556742 PFKFB3Q16875 520 aaPredicted RBP12.34□□□□□ -0.43
IFT43-212ENST00000556742 PCNX4Q63HM2 1172 aa12.34□□□□□ -0.43
IFT43-212ENST00000556742 CHRDL2Q6WN34 429 aa12.34□□□□□ -0.43
IFT43-212ENST00000556742 SEPT14Q6ZU15 432 aa12.34□□□□□ -0.43
IFT43-212ENST00000556742 SLC43A3Q8NBI5 491 aa12.34□□□□□ -0.43
IFT43-212ENST00000556742 IL31RAQ8NI17 732 aa12.34□□□□□ -0.43
IFT43-212ENST00000556742 GPKOWQ92917 476 aaPredicted RBP eCLIP12.34□□□□□ -0.43
IFT43-212ENST00000556742 INPP4AQ96PE3 977 aaPredicted RBP12.34□□□□□ -0.43
IFT43-212ENST00000556742 GDF15Q99988 308 aa12.34□□□□□ -0.43
IFT43-212ENST00000556742 RNF26Q9BY78 433 aaPredicted RBP12.34□□□□□ -0.43
IFT43-212ENST00000556742 PRKAG2Q9UGJ0 569 aa12.34□□□□□ -0.43
IFT43-212ENST00000556742 ZMYND8Q9ULU4 1186 aaPredicted RBP12.34□□□□□ -0.43
IFT43-212ENST00000556742 COLQQ9Y215 455 aaPredicted RBP12.34□□□□□ -0.43
IFT43-212ENST00000556742 MRVI1Q9Y6F6 885 aa12.34□□□□□ -0.43
IFT43-212ENST00000556742 TRIP12Q14669 1992 aaPredicted RBP12.33□□□□□ -0.44
IFT43-212ENST00000556742 SPDYE3A6NKU9 549 aa12.33□□□□□ -0.44
IFT43-212ENST00000556742 DCDC2CA8MYV0 355 aa12.33□□□□□ -0.44
IFT43-212ENST00000556742 STXBP3O00186 592 aa12.33□□□□□ -0.44
IFT43-212ENST00000556742 ARVCFO00192 962 aa12.33□□□□□ -0.44
IFT43-212ENST00000556742 PRPF3O43395 683 aaKnown RBP12.33□□□□□ -0.44
IFT43-212ENST00000556742 CLTBP09497 229 aa12.33□□□□□ -0.44
IFT43-212ENST00000556742 SCG2P13521 617 aa12.33□□□□□ -0.44
IFT43-212ENST00000556742 SYN1P17600 705 aa12.33□□□□□ -0.44
IFT43-212ENST00000556742 PTGS1P23219 599 aa12.33□□□□□ -0.44
IFT43-212ENST00000556742 ICAM3P32942 547 aa12.33□□□□□ -0.44
IFT43-212ENST00000556742 MRPS9P82933 396 aaKnown RBP12.33□□□□□ -0.44
IFT43-212ENST00000556742 PURAQ00577 322 aaKnown RBP12.33□□□□□ -0.44
IFT43-212ENST00000556742 ARHGAP1Q07960 439 aa12.33□□□□□ -0.44
IFT43-212ENST00000556742 LY6KQ17RY6 165 aa12.33□□□□□ -0.44
IFT43-212ENST00000556742 GNPTABQ3T906 1256 aa12.33□□□□□ -0.44
IFT43-212ENST00000556742 TYW1BQ6NUM6 668 aa12.33□□□□□ -0.44
IFT43-212ENST00000556742 CXCL17Q6UXB2 119 aa12.33□□□□□ -0.44
IFT43-212ENST00000556742 RIC8AQ9NPQ8 531 aa12.33□□□□□ -0.44
IFT43-212ENST00000556742 PDLIM7Q9NR12 457 aa12.33□□□□□ -0.44
IFT43-212ENST00000556742 PDRG1Q9NUG6 133 aa12.33□□□□□ -0.44
IFT43-212ENST00000556742 TANC1Q9C0D5 1861 aa12.33□□□□□ -0.44
IFT43-212ENST00000556742 ESYT2A0FGR8 921 aa12.32□□□□□ -0.44
IFT43-212ENST00000556742 KIAA0355O15063 1070 aa12.32□□□□□ -0.44
IFT43-212ENST00000556742 PQBP1O60828 265 aaKnown RBP12.32□□□□□ -0.44
IFT43-212ENST00000556742 SEC24BO95487 1268 aa12.32□□□□□ -0.44
IFT43-212ENST00000556742 FOSP01100 380 aaPredicted RBP12.32□□□□□ -0.44
IFT43-212ENST00000556742 MAGEA10P43363 369 aaPredicted RBP12.32□□□□□ -0.44
IFT43-212ENST00000556742 FAAP100Q0VG06 881 aa12.32□□□□□ -0.44
IFT43-212ENST00000556742 ITGA7Q13683 1181 aa12.32□□□□□ -0.44
IFT43-212ENST00000556742 LAMC2Q13753 1193 aa12.32□□□□□ -0.44
IFT43-212ENST00000556742 ANKRD1Q15327 319 aa12.32□□□□□ -0.44
IFT43-212ENST00000556742 MCTP2Q6DN12 878 aa12.32□□□□□ -0.44
IFT43-212ENST00000556742 CCDC12Q8WUD4 166 aaPredicted RBP12.32□□□□□ -0.44
IFT43-212ENST00000556742 COPS5Q92905 334 aa12.32□□□□□ -0.44
IFT43-212ENST00000556742 VTI1AQ96AJ9 217 aa12.32□□□□□ -0.44
IFT43-212ENST00000556742 MTG1Q9BT17 334 aaPredicted RBP12.32□□□□□ -0.44
IFT43-212ENST00000556742 EHMT1Q9H9B1 1298 aa12.32□□□□□ -0.44
IFT43-212ENST00000556742 SMCO2A6NFE2 343 aa12.31□□□□□ -0.44
IFT43-212ENST00000556742 TLR3O15455 904 aaKnown RBP12.31□□□□□ -0.44
IFT43-212ENST00000556742 FIBPO43427 364 aa12.31□□□□□ -0.44
IFT43-212ENST00000556742 CD4P01730 458 aa12.31□□□□□ -0.44
IFT43-212ENST00000556742 MMP3P08254 477 aa12.31□□□□□ -0.44
IFT43-212ENST00000556742 CLK2P49760 499 aaKnown RBP12.31□□□□□ -0.44
IFT43-212ENST00000556742 ADCY7P51828 1080 aa12.31□□□□□ -0.44
IFT43-212ENST00000556742 CCT2P78371 535 aaKnown RBP12.31□□□□□ -0.44
IFT43-212ENST00000556742 AKAP17AQ02040 695 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms