RNA–Protein interactions for RNA: ENST00000556516.1

PCNX1-212, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-212ENST00000556516 COL6A2P12110 1019 aa6.63□□□□□ -1.35
PCNX1-212ENST00000556516 KIZQ2M2Z5 673 aa6.63□□□□□ -1.35
PCNX1-212ENST00000556516 ATG4DQ86TL0 474 aaPredicted RBP6.63□□□□□ -1.35
PCNX1-212ENST00000556516 ZC3H7AQ8IWR0 971 aaKnown RBP6.63□□□□□ -1.35
PCNX1-212ENST00000556516 SYNPOQ8N3V7 929 aa6.63□□□□□ -1.35
PCNX1-212ENST00000556516 CISD2Q8N5K1 135 aaKnown RBP6.63□□□□□ -1.35
PCNX1-212ENST00000556516 PCDH19Q8TAB3 1148 aa6.63□□□□□ -1.35
PCNX1-212ENST00000556516 MFSD3Q96ES6 412 aa6.63□□□□□ -1.35
PCNX1-212ENST00000556516 LIN37Q96GY3 246 aaPredicted RBP6.63□□□□□ -1.35
PCNX1-212ENST00000556516 ALG1Q9BT22 464 aa6.63□□□□□ -1.35
PCNX1-212ENST00000556516 SLKQ9H2G2 1235 aaPredicted RBP6.63□□□□□ -1.35
PCNX1-212ENST00000556516 BCAS3Q9H6U6 928 aa6.63□□□□□ -1.35
PCNX1-212ENST00000556516 YBX2Q9Y2T7 364 aaKnown RBP6.63□□□□□ -1.35
PCNX1-212ENST00000556516 ZC3H12DA2A288 527 aaKnown RBP6.62□□□□□ -1.35
PCNX1-212ENST00000556516 FAM83GA6ND36 823 aa6.62□□□□□ -1.35
PCNX1-212ENST00000556516 ARVCFO00192 962 aa6.62□□□□□ -1.35
PCNX1-212ENST00000556516 KCNK3O14649 394 aa6.62□□□□□ -1.35
PCNX1-212ENST00000556516 KCNQ2O43526 872 aa6.62□□□□□ -1.35
PCNX1-212ENST00000556516 PYGMP11217 842 aa6.62□□□□□ -1.35
PCNX1-212ENST00000556516 MYCLP1P12525 358 aaPredicted RBP6.62□□□□□ -1.35
PCNX1-212ENST00000556516 PDE6BP35913 854 aa6.62□□□□□ -1.35
PCNX1-212ENST00000556516 DNM2P50570 870 aa6.62□□□□□ -1.35
PCNX1-212ENST00000556516 PAK1Q13153 545 aa6.62□□□□□ -1.35
PCNX1-212ENST00000556516 KCNMB1Q16558 191 aa6.62□□□□□ -1.35
PCNX1-212ENST00000556516 ZSWIM9Q86XI8 627 aa6.62□□□□□ -1.35
PCNX1-212ENST00000556516 UBR7Q8N806 425 aa6.62□□□□□ -1.35
PCNX1-212ENST00000556516 INTS4Q96HW7 963 aaKnown RBP6.62□□□□□ -1.35
PCNX1-212ENST00000556516 ZFYVE21Q9BQ24 234 aa6.62□□□□□ -1.35
PCNX1-212ENST00000556516 TARS2Q9BW92 718 aaKnown RBP6.62□□□□□ -1.35
PCNX1-212ENST00000556516 TNFRSF12AQ9NP84 129 aa6.62□□□□□ -1.35
PCNX1-212ENST00000556516 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.62□□□□□ -1.35
PCNX1-212ENST00000556516 PLA2G2DQ9UNK4 145 aa6.62□□□□□ -1.35
PCNX1-212ENST00000556516 CCDC88BA6NC98 1476 aa6.61□□□□□ -1.35
PCNX1-212ENST00000556516 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.61□□□□□ -1.35
PCNX1-212ENST00000556516 KPNA6O60684 536 aa6.61□□□□□ -1.35
PCNX1-212ENST00000556516 RFPL3O75679 317 aa6.61□□□□□ -1.35
PCNX1-212ENST00000556516 CLSTN1O94985 981 aa6.61□□□□□ -1.35
PCNX1-212ENST00000556516 DBHP09172 617 aa6.61□□□□□ -1.35
PCNX1-212ENST00000556516 GLI4P10075 376 aa6.61□□□□□ -1.35
PCNX1-212ENST00000556516 PNLIPP16233 465 aa6.61□□□□□ -1.35
PCNX1-212ENST00000556516 KCNA6P17658 529 aa6.61□□□□□ -1.35
PCNX1-212ENST00000556516 CORO7P57737 925 aa6.61□□□□□ -1.35
PCNX1-212ENST00000556516 SKOR2Q2VWA4 1001 aaPredicted RBP6.61□□□□□ -1.35
PCNX1-212ENST00000556516 TM4SF20Q53R12 229 aa6.61□□□□□ -1.35
PCNX1-212ENST00000556516 WWC2Q6AWC2 1192 aa6.61□□□□□ -1.35
PCNX1-212ENST00000556516 LRRTM3Q86VH5 581 aa6.61□□□□□ -1.35
PCNX1-212ENST00000556516 RBM12BQ8IXT5 1001 aaKnown RBP6.61□□□□□ -1.35
PCNX1-212ENST00000556516 NLGN2Q8NFZ4 835 aa6.61□□□□□ -1.35
PCNX1-212ENST00000556516 PIP4K2CQ8TBX8 421 aa6.61□□□□□ -1.35
PCNX1-212ENST00000556516 FAM168AQ92567 244 aa6.61□□□□□ -1.35
PCNX1-212ENST00000556516 CBLCQ9ULV8 474 aa6.61□□□□□ -1.35
PCNX1-212ENST00000556516 PLAAQ9Y263 795 aa6.61□□□□□ -1.35
PCNX1-212ENST00000556516 CARMIL2Q6F5E8 1435 aa6.6□□□□□ -1.35
PCNX1-212ENST00000556516 A0A087X0B3 334 aa6.6□□□□□ -1.35
PCNX1-212ENST00000556516 CCDC66A2RUB6 948 aa6.6□□□□□ -1.35
PCNX1-212ENST00000556516 NKRFO15226 690 aaKnown RBP eCLIP6.6□□□□□ -1.35
PCNX1-212ENST00000556516 CKMP06732 381 aa6.6□□□□□ -1.35
PCNX1-212ENST00000556516 JMJD7P0C870 316 aa6.6□□□□□ -1.35
PCNX1-212ENST00000556516 MASP1P48740 699 aa6.6□□□□□ -1.35
PCNX1-212ENST00000556516 IRAK1P51617 712 aa6.6□□□□□ -1.35
PCNX1-212ENST00000556516 GTF2A2P52657 109 aa6.6□□□□□ -1.35
PCNX1-212ENST00000556516 PIK3R6Q5UE93 754 aa6.6□□□□□ -1.35
PCNX1-212ENST00000556516 Q8N1Y9 231 aa6.6□□□□□ -1.35
PCNX1-212ENST00000556516 IGSF22Q8N9C0 903 aa6.6□□□□□ -1.35
PCNX1-212ENST00000556516 CATSPERZQ9NTU4 200 aa6.6□□□□□ -1.35
PCNX1-212ENST00000556516 COA3Q9Y2R0 106 aaPredicted RBP6.6□□□□□ -1.35
PCNX1-212ENST00000556516 X6R8D5 127 aa6.6□□□□□ -1.35
PCNX1-212ENST00000556516 ANKRD62A6NC57 917 aa6.59□□□□□ -1.35
PCNX1-212ENST00000556516 ZNF503-AS2A6NEH8 195 aa6.59□□□□□ -1.35
PCNX1-212ENST00000556516 FAM47E-STBD1D6RA91 191 aa6.59□□□□□ -1.35
PCNX1-212ENST00000556516 F8W031 263 aaPredicted RBP6.59□□□□□ -1.35
PCNX1-212ENST00000556516 H7BY64 318 aa6.59□□□□□ -1.35
PCNX1-212ENST00000556516 PDE8AO60658 829 aa6.59□□□□□ -1.35
PCNX1-212ENST00000556516 GLRX3O76003 335 aaKnown RBP6.59□□□□□ -1.35
PCNX1-212ENST00000556516 GLI1P08151 1106 aa6.59□□□□□ -1.35
PCNX1-212ENST00000556516 GNAT1P11488 350 aa6.59□□□□□ -1.35
PCNX1-212ENST00000556516 ITGB5P18084 799 aa6.59□□□□□ -1.35
PCNX1-212ENST00000556516 KRT15P19012 456 aa6.59□□□□□ -1.35
PCNX1-212ENST00000556516 IGFALSP35858 605 aa6.59□□□□□ -1.35
PCNX1-212ENST00000556516 ARL4AP40617 200 aa6.59□□□□□ -1.35
PCNX1-212ENST00000556516 NEK4P51957 841 aa6.59□□□□□ -1.35
PCNX1-212ENST00000556516 SNX17Q15036 470 aa6.59□□□□□ -1.35
PCNX1-212ENST00000556516 RAB3GAP1Q15042 981 aa6.59□□□□□ -1.35
PCNX1-212ENST00000556516 PCBP1Q15365 356 aaKnown RBP eCLIP6.59□□□□□ -1.35
PCNX1-212ENST00000556516 FSTL4Q6MZW2 842 aa6.59□□□□□ -1.35
PCNX1-212ENST00000556516 MPZL3Q6UWV2 235 aa6.59□□□□□ -1.35
PCNX1-212ENST00000556516 RPTNQ6XPR3 784 aa6.59□□□□□ -1.35
PCNX1-212ENST00000556516 FILIP1Q7Z7B0 1213 aa6.59□□□□□ -1.35
PCNX1-212ENST00000556516 DIRC2Q96SL1 478 aa6.59□□□□□ -1.35
PCNX1-212ENST00000556516 FAM126AQ9BYI3 521 aaPredicted RBP6.59□□□□□ -1.35
PCNX1-212ENST00000556516 CRTAC1Q9NQ79 661 aa6.59□□□□□ -1.35
PCNX1-212ENST00000556516 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.59□□□□□ -1.35
PCNX1-212ENST00000556516 SAMD15Q9P1V8 674 aa6.59□□□□□ -1.35
PCNX1-212ENST00000556516 MAGEC2Q9UBF1 373 aaPredicted RBP6.59□□□□□ -1.35
PCNX1-212ENST00000556516 HMGXB3Q12766 1538 aa6.59□□□□□ -1.35
PCNX1-212ENST00000556516 TCRBV5S4A2TA0A5A2 114 aa6.58□□□□□ -1.36
PCNX1-212ENST00000556516 M0R2C6 588 aa6.58□□□□□ -1.36
PCNX1-212ENST00000556516 LTFP02788 710 aa6.58□□□□□ -1.36
PCNX1-212ENST00000556516 ASLP04424 464 aa6.58□□□□□ -1.36
PCNX1-212ENST00000556516 PDE6AP16499 860 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms