RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 ADAMTS13Q76LX8 1427 aa16.46■□□□□ 0.23
ARHGEF40-207ENST00000556399 USP17L3A6NCW0 530 aa16.46■□□□□ 0.23
ARHGEF40-207ENST00000556399 USP17L4A6NCW7 530 aa16.46■□□□□ 0.23
ARHGEF40-207ENST00000556399 PCK1P35558 622 aa16.46■□□□□ 0.23
ARHGEF40-207ENST00000556399 BTDP43251 543 aa16.46■□□□□ 0.23
ARHGEF40-207ENST00000556399 MECOMQ03112 1051 aa16.46■□□□□ 0.23
ARHGEF40-207ENST00000556399 USP17L1Q7RTZ2 530 aa16.46■□□□□ 0.23
ARHGEF40-207ENST00000556399 HNRNPLLQ8WVV9 542 aaKnown RBP16.46■□□□□ 0.23
ARHGEF40-207ENST00000556399 ATP8A1Q9Y2Q0 1164 aa16.46■□□□□ 0.23
ARHGEF40-207ENST00000556399 TMEM94Q12767 1356 aa16.46■□□□□ 0.23
ARHGEF40-207ENST00000556399 NCK2O43639 380 aa16.46■□□□□ 0.23
ARHGEF40-207ENST00000556399 DHX9Q08211 1270 aaKnown RBP16.46■□□□□ 0.23
ARHGEF40-207ENST00000556399 CCDC197Q8NCU1 140 aa16.46■□□□□ 0.23
ARHGEF40-207ENST00000556399 ZNF804BA4D1E1 1349 aa16.46■□□□□ 0.22
ARHGEF40-207ENST00000556399 ZNF185O15231 689 aa16.45■□□□□ 0.22
ARHGEF40-207ENST00000556399 TPH2Q8IWU9 490 aa16.45■□□□□ 0.22
ARHGEF40-207ENST00000556399 PBKQ96KB5 322 aa16.45■□□□□ 0.22
ARHGEF40-207ENST00000556399 AGXT2Q9BYV1 514 aa16.45■□□□□ 0.22
ARHGEF40-207ENST00000556399 PALMO75781 387 aa16.45■□□□□ 0.22
ARHGEF40-207ENST00000556399 PNKPQ96T60 521 aa16.45■□□□□ 0.22
ARHGEF40-207ENST00000556399 SYNCQ9H7C4 482 aa16.45■□□□□ 0.22
ARHGEF40-207ENST00000556399 NOVA2Q9UNW9 492 aaKnown RBP16.45■□□□□ 0.22
ARHGEF40-207ENST00000556399 PLAAQ9Y263 795 aa16.45■□□□□ 0.22
ARHGEF40-207ENST00000556399 STX2P32856 288 aa16.45■□□□□ 0.22
ARHGEF40-207ENST00000556399 MFSD14BQ5SR56 506 aa16.45■□□□□ 0.22
ARHGEF40-207ENST00000556399 DPP8Q6V1X1 898 aaPredicted RBP16.45■□□□□ 0.22
ARHGEF40-207ENST00000556399 ELOA2Q8IYF1 753 aaPredicted RBP16.45■□□□□ 0.22
ARHGEF40-207ENST00000556399 GJA10Q969M2 543 aa16.45■□□□□ 0.22
ARHGEF40-207ENST00000556399 TACO1Q9BSH4 297 aaKnown RBP16.45■□□□□ 0.22
ARHGEF40-207ENST00000556399 AP1M1Q9BXS5 423 aa16.45■□□□□ 0.22
ARHGEF40-207ENST00000556399 GFPT1Q06210 699 aaPredicted RBP16.45■□□□□ 0.22
ARHGEF40-207ENST00000556399 USP17L2Q6R6M4 530 aa16.45■□□□□ 0.22
ARHGEF40-207ENST00000556399 ILDR1Q86SU0 546 aaPredicted RBP16.45■□□□□ 0.22
ARHGEF40-207ENST00000556399 RIN2Q8WYP3 895 aaPredicted RBP16.45■□□□□ 0.22
ARHGEF40-207ENST00000556399 TBC1D31Q96DN5 1066 aa16.45■□□□□ 0.22
ARHGEF40-207ENST00000556399 RBM17Q96I25 401 aaKnown RBP16.45■□□□□ 0.22
ARHGEF40-207ENST00000556399 MAP3K14Q99558 947 aa16.45■□□□□ 0.22
ARHGEF40-207ENST00000556399 ESYT3A0FGR9 886 aa16.44■□□□□ 0.22
ARHGEF40-207ENST00000556399 CYP2D6P10635 497 aa16.44■□□□□ 0.22
ARHGEF40-207ENST00000556399 GBP1P32455 592 aa16.44■□□□□ 0.22
ARHGEF40-207ENST00000556399 IFNAR2P48551 515 aa16.44■□□□□ 0.22
ARHGEF40-207ENST00000556399 IMPG2Q9BZV3 1241 aa16.44■□□□□ 0.22
ARHGEF40-207ENST00000556399 INTS9Q9NV88 658 aaKnown RBP16.44■□□□□ 0.22
ARHGEF40-207ENST00000556399 SLAIN2Q9P270 581 aa16.44■□□□□ 0.22
ARHGEF40-207ENST00000556399 KRT26Q7Z3Y9 468 aa16.44■□□□□ 0.22
ARHGEF40-207ENST00000556399 DGKHQ86XP1 1220 aa16.44■□□□□ 0.22
ARHGEF40-207ENST00000556399 SLFN12Q8IYM2 578 aa16.44■□□□□ 0.22
ARHGEF40-207ENST00000556399 PHF20Q9BVI0 1012 aa16.44■□□□□ 0.22
ARHGEF40-207ENST00000556399 AFPP02771 609 aaKnown RBP16.44■□□□□ 0.22
ARHGEF40-207ENST00000556399 PSMD2Q13200 908 aa16.44■□□□□ 0.22
ARHGEF40-207ENST00000556399 UBE2Q2LH0YL09 131 aa16.44■□□□□ 0.22
ARHGEF40-207ENST00000556399 CTNND1O60716 968 aaKnown RBP16.44■□□□□ 0.22
ARHGEF40-207ENST00000556399 TRIM28Q13263 835 aaKnown RBP16.44■□□□□ 0.22
ARHGEF40-207ENST00000556399 E2F5Q15329 346 aa16.44■□□□□ 0.22
ARHGEF40-207ENST00000556399 BEND6Q5SZJ8 279 aaPredicted RBP16.44■□□□□ 0.22
ARHGEF40-207ENST00000556399 TRIM65Q6PJ69 517 aa16.44■□□□□ 0.22
ARHGEF40-207ENST00000556399 SPATA4Q8NEY3 305 aa16.44■□□□□ 0.22
ARHGEF40-207ENST00000556399 DAAM1Q9Y4D1 1078 aa16.44■□□□□ 0.22
ARHGEF40-207ENST00000556399 LOC102724428A0A0B4J2F2 783 aa16.43■□□□□ 0.22
ARHGEF40-207ENST00000556399 SIK1P57059 783 aa16.43■□□□□ 0.22
ARHGEF40-207ENST00000556399 TRAPPC3LQ5T215 181 aa16.43■□□□□ 0.22
ARHGEF40-207ENST00000556399 CCDC63Q8NA47 563 aa16.43■□□□□ 0.22
ARHGEF40-207ENST00000556399 COA7Q96BR5 231 aa16.43■□□□□ 0.22
ARHGEF40-207ENST00000556399 CEP128Q6ZU80 1094 aa16.43■□□□□ 0.22
ARHGEF40-207ENST00000556399 LRRC1Q9BTT6 524 aa16.43■□□□□ 0.22
ARHGEF40-207ENST00000556399 HPCAL4Q9UM19 191 aa16.43■□□□□ 0.22
ARHGEF40-207ENST00000556399 PNPLA7Q6ZV29 1317 aa16.43■□□□□ 0.22
ARHGEF40-207ENST00000556399 UNC13DQ70J99 1090 aa16.43■□□□□ 0.22
ARHGEF40-207ENST00000556399 LMNTD2Q8IXW0 634 aa16.43■□□□□ 0.22
ARHGEF40-207ENST00000556399 GAS8O95995 478 aa16.43■□□□□ 0.22
ARHGEF40-207ENST00000556399 FERP16591 822 aa16.43■□□□□ 0.22
ARHGEF40-207ENST00000556399 PLTPP55058 493 aa16.43■□□□□ 0.22
ARHGEF40-207ENST00000556399 PABPC4Q13310 644 aaKnown RBP eCLIP16.43■□□□□ 0.22
ARHGEF40-207ENST00000556399 ERFEQ4G0M1 354 aa16.43■□□□□ 0.22
ARHGEF40-207ENST00000556399 FYB2Q5VWT5 728 aa16.43■□□□□ 0.22
ARHGEF40-207ENST00000556399 CYP4A11Q02928 519 aa16.42■□□□□ 0.22
ARHGEF40-207ENST00000556399 TXNRD1Q16881 649 aa16.42■□□□□ 0.22
ARHGEF40-207ENST00000556399 SMC6Q96SB8 1091 aa16.42■□□□□ 0.22
ARHGEF40-207ENST00000556399 ACTR5Q9H9F9 607 aaPredicted RBP16.42■□□□□ 0.22
ARHGEF40-207ENST00000556399 EPB41L4AQ9HCS5 686 aaPredicted RBP16.42■□□□□ 0.22
ARHGEF40-207ENST00000556399 SNX12Q9UMY4 172 aa16.42■□□□□ 0.22
ARHGEF40-207ENST00000556399 CUL1Q13616 776 aa16.42■□□□□ 0.22
ARHGEF40-207ENST00000556399 UAP1Q16222 522 aaPredicted RBP16.42■□□□□ 0.22
ARHGEF40-207ENST00000556399 ARMC9Q7Z3E5 817 aa16.42■□□□□ 0.22
ARHGEF40-207ENST00000556399 PPFIBP2Q8ND30 876 aa16.42■□□□□ 0.22
ARHGEF40-207ENST00000556399 TBC1D22AQ8WUA7 517 aa16.42■□□□□ 0.22
ARHGEF40-207ENST00000556399 EMILIN3Q9NT22 766 aa16.42■□□□□ 0.22
ARHGEF40-207ENST00000556399 ZNF446Q9NWS9 450 aa16.42■□□□□ 0.22
ARHGEF40-207ENST00000556399 KLHL14Q9P2G3 628 aa16.42■□□□□ 0.22
ARHGEF40-207ENST00000556399 DDX39AO00148 427 aaKnown RBP16.42■□□□□ 0.22
ARHGEF40-207ENST00000556399 ADSSL1Q8N142 457 aa16.42■□□□□ 0.22
ARHGEF40-207ENST00000556399 ATP2A2P16615 1042 aaKnown RBP16.42■□□□□ 0.22
ARHGEF40-207ENST00000556399 LMNB1P20700 586 aa16.42■□□□□ 0.22
ARHGEF40-207ENST00000556399 BIRC3Q13489 604 aa16.42■□□□□ 0.22
ARHGEF40-207ENST00000556399 C10orf76Q5T2E6 689 aa16.42■□□□□ 0.22
ARHGEF40-207ENST00000556399 CCNI2Q6ZMN8 369 aaPredicted RBP16.42■□□□□ 0.22
ARHGEF40-207ENST00000556399 STMN2Q93045 179 aa16.42■□□□□ 0.22
ARHGEF40-207ENST00000556399 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.42■□□□□ 0.223e-7■■■□□ 17.9
ARHGEF40-207ENST00000556399 PPP1R3GB7ZBB8 358 aa16.41■□□□□ 0.22
ARHGEF40-207ENST00000556399 CFBP00751 764 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms