RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 KIR2DL2P43627 348 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-240ENST00000556339 AFF3P51826 1226 aaKnown RBP5.34□□□□□ -1.55
ATXN3-240ENST00000556339 TMF1P82094 1093 aa5.34□□□□□ -1.55
ATXN3-240ENST00000556339 CWF19L2Q2TBE0 894 aaKnown RBP5.34□□□□□ -1.55
ATXN3-240ENST00000556339 ARSHQ5FYA8 562 aa5.34□□□□□ -1.55
ATXN3-240ENST00000556339 ERICH6BQ5W0A0 696 aa5.34□□□□□ -1.55
ATXN3-240ENST00000556339 REC114Q7Z4M0 266 aa5.34□□□□□ -1.55
ATXN3-240ENST00000556339 NLRX1Q86UT6 975 aa5.34□□□□□ -1.55
ATXN3-240ENST00000556339 DAGLBQ8NCG7 672 aa5.34□□□□□ -1.55
ATXN3-240ENST00000556339 IP6K1Q92551 441 aa5.34□□□□□ -1.55
ATXN3-240ENST00000556339 TCTN2Q96GX1 697 aa5.34□□□□□ -1.55
ATXN3-240ENST00000556339 RHOVQ96L33 236 aa5.34□□□□□ -1.55
ATXN3-240ENST00000556339 HDAC8Q9BY41 377 aa5.34□□□□□ -1.55
ATXN3-240ENST00000556339 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.34□□□□□ -1.55
ATXN3-240ENST00000556339 POLR3KQ9Y2Y1 108 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-240ENST00000556339 TAF6LQ9Y6J9 622 aa5.34□□□□□ -1.55
ATXN3-240ENST00000556339 THSD7AQ9UPZ6 1657 aa5.34□□□□□ -1.56
ATXN3-240ENST00000556339 DISP2A7MBM2 1401 aa5.33□□□□□ -1.56
ATXN3-240ENST00000556339 CPSF1Q10570 1443 aaKnown RBP5.33□□□□□ -1.56
ATXN3-240ENST00000556339 ADAMTS20P59510 1910 aa5.33□□□□□ -1.56
ATXN3-240ENST00000556339 RGS13O14921 159 aa5.33□□□□□ -1.56
ATXN3-240ENST00000556339 PPM1GO15355 546 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-240ENST00000556339 NRDCO43847 1150 aa5.33□□□□□ -1.56
ATXN3-240ENST00000556339 CTSHP09668 335 aa5.33□□□□□ -1.56
ATXN3-240ENST00000556339 SDHBP21912 280 aa5.33□□□□□ -1.56
ATXN3-240ENST00000556339 SLC15A2Q16348 729 aa5.33□□□□□ -1.56
ATXN3-240ENST00000556339 LCE5AQ5TCM9 118 aa5.33□□□□□ -1.56
ATXN3-240ENST00000556339 SND1Q7KZF4 910 aaKnown RBP eCLIP5.33□□□□□ -1.56
ATXN3-240ENST00000556339 TMC4Q7Z404 712 aa5.33□□□□□ -1.56
ATXN3-240ENST00000556339 ZNF655Q8N720 491 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-240ENST00000556339 SHISA4Q96DD7 197 aa5.33□□□□□ -1.56
ATXN3-240ENST00000556339 PUS7Q96PZ0 661 aaKnown RBP5.33□□□□□ -1.56
ATXN3-240ENST00000556339 G6PC3Q9BUM1 346 aa5.33□□□□□ -1.56
ATXN3-240ENST00000556339 CRTAC1Q9NQ79 661 aa5.33□□□□□ -1.56
ATXN3-240ENST00000556339 MBD1Q9UIS9 605 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-240ENST00000556339 CRYBG1Q9Y4K1 1723 aa5.33□□□□□ -1.56
ATXN3-240ENST00000556339 TOPAZ1Q8N9V7 1692 aa5.33□□□□□ -1.56
ATXN3-240ENST00000556339 TRPM1Q7Z4N2 1603 aa5.33□□□□□ -1.56
ATXN3-240ENST00000556339 NRKQ7Z2Y5 1582 aa5.33□□□□□ -1.56
ATXN3-240ENST00000556339 A0A0G2JLL6 359 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-240ENST00000556339 ABLIM1O14639 778 aa5.32□□□□□ -1.56
ATXN3-240ENST00000556339 TRIM13O60858 407 aa5.32□□□□□ -1.56
ATXN3-240ENST00000556339 FBLN1P23142 703 aa5.32□□□□□ -1.56
ATXN3-240ENST00000556339 RTP1P59025 263 aa5.32□□□□□ -1.56
ATXN3-240ENST00000556339 TMC3Q7Z5M5 1100 aa5.32□□□□□ -1.56
ATXN3-240ENST00000556339 USHBP1Q8N6Y0 703 aa5.32□□□□□ -1.56
ATXN3-240ENST00000556339 FBXO27Q8NI29 283 aa5.32□□□□□ -1.56
ATXN3-240ENST00000556339 ZCRB1Q8TBF4 217 aaKnown RBP5.32□□□□□ -1.56
ATXN3-240ENST00000556339 RAPGEF4Q8WZA2 1011 aa5.32□□□□□ -1.56
ATXN3-240ENST00000556339 KCNC2Q96PR1 638 aa5.32□□□□□ -1.56
ATXN3-240ENST00000556339 RSRP1Q9BUV0 290 aa5.32□□□□□ -1.56
ATXN3-240ENST00000556339 TFCP2L1Q9NZI6 479 aa5.32□□□□□ -1.56
ATXN3-240ENST00000556339 TNS1Q9HBL0 1735 aaKnown RBP5.31□□□□□ -1.56
ATXN3-240ENST00000556339 HRKO00198 91 aa5.31□□□□□ -1.56
ATXN3-240ENST00000556339 MEIS1O00470 390 aa5.31□□□□□ -1.56
ATXN3-240ENST00000556339 N4BP3O15049 544 aa5.31□□□□□ -1.56
ATXN3-240ENST00000556339 DNAJA2O60884 412 aa5.31□□□□□ -1.56
ATXN3-240ENST00000556339 CLEC3AO75596 197 aa5.31□□□□□ -1.56
ATXN3-240ENST00000556339 MPOP05164 745 aa5.31□□□□□ -1.56
ATXN3-240ENST00000556339 PNLIPP16233 465 aa5.31□□□□□ -1.56
ATXN3-240ENST00000556339 POLD1P28340 1107 aa5.31□□□□□ -1.56
ATXN3-240ENST00000556339 HOXC9P31274 260 aa5.31□□□□□ -1.56
ATXN3-240ENST00000556339 VIPR1P32241 457 aa5.31□□□□□ -1.56
ATXN3-240ENST00000556339 EPHB3P54753 998 aa5.31□□□□□ -1.56
ATXN3-240ENST00000556339 RAD51AP2Q09MP3 1159 aa5.31□□□□□ -1.56
ATXN3-240ENST00000556339 TMEM62Q0P6H9 643 aa5.31□□□□□ -1.56
ATXN3-240ENST00000556339 RRS1Q15050 365 aaKnown RBP5.31□□□□□ -1.56
ATXN3-240ENST00000556339 GPR162Q16538 588 aa5.31□□□□□ -1.56
ATXN3-240ENST00000556339 GALNT18Q6P9A2 607 aa5.31□□□□□ -1.56
ATXN3-240ENST00000556339 PANK1Q8TE04 598 aa5.31□□□□□ -1.56
ATXN3-240ENST00000556339 HHIPL1Q96JK4 782 aa5.31□□□□□ -1.56
ATXN3-240ENST00000556339 TRAIPQ9BWF2 469 aa5.31□□□□□ -1.56
ATXN3-240ENST00000556339 CDADC1Q9BWV3 514 aa5.31□□□□□ -1.56
ATXN3-240ENST00000556339 PDGFDQ9GZP0 370 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-240ENST00000556339 GMIPQ9P107 970 aa5.31□□□□□ -1.56
ATXN3-240ENST00000556339 PCDHB14Q9Y5E9 798 aa5.31□□□□□ -1.56
ATXN3-240ENST00000556339 SBF2Q86WG5 1849 aa5.31□□□□□ -1.56
ATXN3-240ENST00000556339 PARP4Q9UKK3 1724 aaKnown RBP5.31□□□□□ -1.56
ATXN3-240ENST00000556339 EDC4Q6P2E9 1401 aaKnown RBP5.31□□□□□ -1.56
ATXN3-240ENST00000556339 LMO7Q8WWI1 1683 aa5.31□□□□□ -1.56
ATXN3-240ENST00000556339 LRP5O75197 1615 aa5.3□□□□□ -1.56
ATXN3-240ENST00000556339 COL18A1P39060 1754 aa5.3□□□□□ -1.56
ATXN3-240ENST00000556339 AKAP12Q02952 1782 aa5.3□□□□□ -1.56
ATXN3-240ENST00000556339 SLIT3O75094 1523 aa5.3□□□□□ -1.56
ATXN3-240ENST00000556339 SLC22A31A6NKX4 558 aa5.3□□□□□ -1.56
ATXN3-240ENST00000556339 NOTOA8MTQ0 251 aa5.3□□□□□ -1.56
ATXN3-240ENST00000556339 UBOX5O94941 541 aa5.3□□□□□ -1.56
ATXN3-240ENST00000556339 PRAMEF1O95521 474 aa5.3□□□□□ -1.56
ATXN3-240ENST00000556339 ENDOUP21128 410 aaKnown RBP5.3□□□□□ -1.56
ATXN3-240ENST00000556339 HMGB2P26583 209 aaKnown RBP5.3□□□□□ -1.56
ATXN3-240ENST00000556339 SNW1Q13573 536 aaKnown RBP5.3□□□□□ -1.56
ATXN3-240ENST00000556339 CNKSR3Q6P9H4 555 aa5.3□□□□□ -1.56
ATXN3-240ENST00000556339 ZPBP2Q6X784 338 aa5.3□□□□□ -1.56
ATXN3-240ENST00000556339 AEBP1Q8IUX7 1158 aa5.3□□□□□ -1.56
ATXN3-240ENST00000556339 SP8Q8IXZ3 490 aa5.3□□□□□ -1.56
ATXN3-240ENST00000556339 ZDHHC14Q8IZN3 488 aa5.3□□□□□ -1.56
ATXN3-240ENST00000556339 LINC00116Q8NCU8 138 aa5.3□□□□□ -1.56
ATXN3-240ENST00000556339 ZNF512BQ96KM6 892 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-240ENST00000556339 FCRL2Q96LA5 508 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-240ENST00000556339 MKRN2Q9H000 416 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms