RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 MTA3Q9BTC8 594 aa5.47□□□□□ -1.53
SUPT16H-206ENST00000556309 MCOLN1Q9GZU1 580 aa5.47□□□□□ -1.53
SUPT16H-206ENST00000556309 TRBV23-1A0A0A0MS06 115 aa5.46□□□□□ -1.54
SUPT16H-206ENST00000556309 MYOCOSA0A1B0GUC4 107 aa5.46□□□□□ -1.54
SUPT16H-206ENST00000556309 ZC3H12DA2A288 527 aaKnown RBP5.46□□□□□ -1.54
SUPT16H-206ENST00000556309 MPOP05164 745 aa5.46□□□□□ -1.54
SUPT16H-206ENST00000556309 DBHP09172 617 aa5.46□□□□□ -1.54
SUPT16H-206ENST00000556309 CORO7P57737 925 aa5.46□□□□□ -1.54
SUPT16H-206ENST00000556309 ERVFRD-1P60508 538 aa5.46□□□□□ -1.54
SUPT16H-206ENST00000556309 RPL11P62913 178 aaKnown RBP5.46□□□□□ -1.54
SUPT16H-206ENST00000556309 KCNAB2Q13303 367 aa5.46□□□□□ -1.54
SUPT16H-206ENST00000556309 NFE2L2Q16236 605 aa5.46□□□□□ -1.54
SUPT16H-206ENST00000556309 SPATS1Q496A3 300 aa5.46□□□□□ -1.54
SUPT16H-206ENST00000556309 ACBD5Q5T8D3 534 aaPredicted RBP5.46□□□□□ -1.54
SUPT16H-206ENST00000556309 IQCEQ6IPM2 695 aa5.46□□□□□ -1.54
SUPT16H-206ENST00000556309 RPTNQ6XPR3 784 aa5.46□□□□□ -1.54
SUPT16H-206ENST00000556309 SP8Q8IXZ3 490 aa5.46□□□□□ -1.54
SUPT16H-206ENST00000556309 NLGN2Q8NFZ4 835 aa5.46□□□□□ -1.54
SUPT16H-206ENST00000556309 PLEKHO2Q8TD55 490 aa5.46□□□□□ -1.54
SUPT16H-206ENST00000556309 PHF20Q9BVI0 1012 aa5.46□□□□□ -1.54
SUPT16H-206ENST00000556309 SGPP1Q9BX95 441 aa5.46□□□□□ -1.54
SUPT16H-206ENST00000556309 ZNF552Q9H707 407 aaPredicted RBP5.46□□□□□ -1.54
SUPT16H-206ENST00000556309 KLHL14Q9P2G3 628 aa5.46□□□□□ -1.54
SUPT16H-206ENST00000556309 PPARGC1AQ9UBK2 798 aaKnown RBP5.46□□□□□ -1.54
SUPT16H-206ENST00000556309 CNOT11Q9UKZ1 510 aaKnown RBP5.46□□□□□ -1.54
SUPT16H-206ENST00000556309 SIT1Q9Y3P8 196 aa5.46□□□□□ -1.54
SUPT16H-206ENST00000556309 TRAF6Q9Y4K3 522 aa5.46□□□□□ -1.54
SUPT16H-206ENST00000556309 KCTD3Q9Y597 815 aa5.46□□□□□ -1.54
SUPT16H-206ENST00000556309 TIMM13Q9Y5L4 95 aaPredicted RBP5.46□□□□□ -1.54
SUPT16H-206ENST00000556309 ASXL2Q76L83 1435 aa5.46□□□□□ -1.54
SUPT16H-206ENST00000556309 C22orf46C9J442 243 aa5.45□□□□□ -1.54
SUPT16H-206ENST00000556309 F8W031 263 aaPredicted RBP5.45□□□□□ -1.54
SUPT16H-206ENST00000556309 NTRK1P04629 796 aa5.45□□□□□ -1.54
SUPT16H-206ENST00000556309 VIPR1P32241 457 aa5.45□□□□□ -1.54
SUPT16H-206ENST00000556309 SRSF3P84103 164 aaKnown RBP5.45□□□□□ -1.54
SUPT16H-206ENST00000556309 CEP68Q76N32 757 aa5.45□□□□□ -1.54
SUPT16H-206ENST00000556309 NLRP10Q86W26 655 aa5.45□□□□□ -1.54
SUPT16H-206ENST00000556309 TMPRSS5Q9H3S3 457 aa5.45□□□□□ -1.54
SUPT16H-206ENST00000556309 BCAS3Q9H6U6 928 aa5.45□□□□□ -1.54
SUPT16H-206ENST00000556309 PLA2G2DQ9UNK4 145 aa5.45□□□□□ -1.54
SUPT16H-206ENST00000556309 GLI4P10075 376 aa5.44□□□□□ -1.54
SUPT16H-206ENST00000556309 SKOR2Q2VWA4 1001 aaPredicted RBP5.44□□□□□ -1.54
SUPT16H-206ENST00000556309 TMC6Q7Z403 805 aa5.44□□□□□ -1.54
SUPT16H-206ENST00000556309 SCUBE1Q8IWY4 988 aa5.44□□□□□ -1.54
SUPT16H-206ENST00000556309 IPO9Q96P70 1041 aaKnown RBP5.44□□□□□ -1.54
SUPT16H-206ENST00000556309 DHRS4Q9BTZ2 278 aa5.44□□□□□ -1.54
SUPT16H-206ENST00000556309 CLDND1Q9NY35 253 aa5.44□□□□□ -1.54
SUPT16H-206ENST00000556309 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.44□□□□□ -1.54
SUPT16H-206ENST00000556309 DBR1Q9UK59 544 aaKnown RBP5.44□□□□□ -1.54
SUPT16H-206ENST00000556309 NPFFR2Q9Y5X5 522 aa5.44□□□□□ -1.54
SUPT16H-206ENST00000556309 PTCH2Q9Y6C5 1203 aa5.44□□□□□ -1.54
SUPT16H-206ENST00000556309 MYO1BO43795 1136 aa5.43□□□□□ -1.54
SUPT16H-206ENST00000556309 IGSF3O75054 1194 aa5.43□□□□□ -1.54
SUPT16H-206ENST00000556309 C6orf222P0C671 652 aaPredicted RBP5.43□□□□□ -1.54
SUPT16H-206ENST00000556309 NCKAP1LP55160 1127 aa5.43□□□□□ -1.54
SUPT16H-206ENST00000556309 LSAMPQ13449 338 aa5.43□□□□□ -1.54
SUPT16H-206ENST00000556309 TESK1Q15569 626 aa5.43□□□□□ -1.54
SUPT16H-206ENST00000556309 ZXDCQ2QGD7 858 aaPredicted RBP5.43□□□□□ -1.54
SUPT16H-206ENST00000556309 PLEKHN1Q494U1 663 aaPredicted RBP5.43□□□□□ -1.54
SUPT16H-206ENST00000556309 C2orf27AQ580R0 203 aa5.43□□□□□ -1.54
SUPT16H-206ENST00000556309 WWC2Q6AWC2 1192 aa5.43□□□□□ -1.54
SUPT16H-206ENST00000556309 PAQR3Q6TCH7 311 aa5.43□□□□□ -1.54
SUPT16H-206ENST00000556309 CABP7Q86V35 215 aa5.43□□□□□ -1.54
SUPT16H-206ENST00000556309 THAP3Q8WTV1 239 aaPredicted RBP5.43□□□□□ -1.54
SUPT16H-206ENST00000556309 DCAF4Q8WV16 495 aa5.43□□□□□ -1.54
SUPT16H-206ENST00000556309 TRMT2BQ96GJ1 504 aaKnown RBP5.43□□□□□ -1.54
SUPT16H-206ENST00000556309 TMEM169Q96HH4 297 aa5.43□□□□□ -1.54
SUPT16H-206ENST00000556309 TEPSINQ96N21 525 aa5.43□□□□□ -1.54
SUPT16H-206ENST00000556309 JAM3Q9BX67 310 aa5.43□□□□□ -1.54
SUPT16H-206ENST00000556309 KRTAP9-8Q9BYQ0 159 aa5.43□□□□□ -1.54
SUPT16H-206ENST00000556309 XYLT2Q9H1B5 865 aa5.43□□□□□ -1.54
SUPT16H-206ENST00000556309 MRPS23Q9Y3D9 190 aaKnown RBP5.43□□□□□ -1.54
SUPT16H-206ENST00000556309 TRIM13O60858 407 aa5.42□□□□□ -1.54
SUPT16H-206ENST00000556309 CYBBP04839 570 aa5.42□□□□□ -1.54
SUPT16H-206ENST00000556309 SUMO1P63165 101 aaKnown RBP5.42□□□□□ -1.54
SUPT16H-206ENST00000556309 YBX1P67809 324 aaKnown RBP5.42□□□□□ -1.54
SUPT16H-206ENST00000556309 PRR5P85299 388 aa5.42□□□□□ -1.54
SUPT16H-206ENST00000556309 ZNF200P98182 395 aaPredicted RBP5.42□□□□□ -1.54
SUPT16H-206ENST00000556309 NFKB2Q00653 900 aa5.42□□□□□ -1.54
SUPT16H-206ENST00000556309 SQSTM1Q13501 440 aa5.42□□□□□ -1.54
SUPT16H-206ENST00000556309 CBX2Q14781 532 aaPredicted RBP5.42□□□□□ -1.54
SUPT16H-206ENST00000556309 OLFML2BQ68BL8 750 aa5.42□□□□□ -1.54
SUPT16H-206ENST00000556309 SH3TC2Q8TF17 1288 aa5.42□□□□□ -1.54
SUPT16H-206ENST00000556309 KISS1RQ969F8 398 aaPredicted RBP5.42□□□□□ -1.54
SUPT16H-206ENST00000556309 SIGLEC10Q96LC7 697 aa5.42□□□□□ -1.54
SUPT16H-206ENST00000556309 CNTD2Q9H8S5 307 aa5.42□□□□□ -1.54
SUPT16H-206ENST00000556309 GPR27Q9NS67 375 aa5.42□□□□□ -1.54
SUPT16H-206ENST00000556309 SIRT5Q9NXA8 310 aa5.42□□□□□ -1.54
SUPT16H-206ENST00000556309 MBD1Q9UIS9 605 aaPredicted RBP5.42□□□□□ -1.54
SUPT16H-206ENST00000556309 SRGAP3O43295 1099 aa5.41□□□□□ -1.54
SUPT16H-206ENST00000556309 EPHB3P54753 998 aa5.41□□□□□ -1.54
SUPT16H-206ENST00000556309 NR1I3Q14994 352 aa5.41□□□□□ -1.54
SUPT16H-206ENST00000556309 LONRF2Q1L5Z9 754 aa5.41□□□□□ -1.54
SUPT16H-206ENST00000556309 STYK1Q6J9G0 422 aa5.41□□□□□ -1.54
SUPT16H-206ENST00000556309 ZC3H14Q6PJT7 736 aaKnown RBP5.41□□□□□ -1.54
SUPT16H-206ENST00000556309 GGNQ86UU5 652 aa5.41□□□□□ -1.54
SUPT16H-206ENST00000556309 JMYQ8N9B5 988 aa5.41□□□□□ -1.54
SUPT16H-206ENST00000556309 ZSWIM2Q8NEG5 633 aa5.41□□□□□ -1.54
SUPT16H-206ENST00000556309 KCNJ15Q99712 375 aa5.41□□□□□ -1.54
SUPT16H-206ENST00000556309 GCM1Q9NP62 436 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms