RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 PDGFCQ9NRA1 345 aa12.79□□□□□ -0.36
CHGA-205ENST00000556098 RNF146Q9NTX7 359 aa12.79□□□□□ -0.36
CHGA-205ENST00000556098 FEM1BQ9UK73 627 aa12.79□□□□□ -0.36
CHGA-205ENST00000556098 PCDHA11Q9Y5I1 949 aa12.79□□□□□ -0.36
CHGA-205ENST00000556098 CHD9Q3L8U1 2897 aa12.79□□□□□ -0.36
CHGA-205ENST00000556098 KIAA1217Q5T5P2 1943 aa12.78□□□□□ -0.36
CHGA-205ENST00000556098 TMEM232C9JQI7 657 aa12.78□□□□□ -0.36
CHGA-205ENST00000556098 F13A1P00488 732 aa12.78□□□□□ -0.36
CHGA-205ENST00000556098 MYL3P08590 195 aa12.78□□□□□ -0.36
CHGA-205ENST00000556098 BMP1P13497 986 aa12.78□□□□□ -0.36
CHGA-205ENST00000556098 ANTXR2P58335 489 aa12.78□□□□□ -0.36
CHGA-205ENST00000556098 ST3GAL1Q11201 340 aa12.78□□□□□ -0.36
CHGA-205ENST00000556098 SCRN1Q12765 414 aa12.78□□□□□ -0.36
CHGA-205ENST00000556098 TTLL4Q14679 1199 aa12.78□□□□□ -0.36
CHGA-205ENST00000556098 TMEM67Q5HYA8 995 aa12.78□□□□□ -0.36
CHGA-205ENST00000556098 LARP1BQ659C4 914 aaKnown RBP12.78□□□□□ -0.36
CHGA-205ENST00000556098 SLFN13Q68D06 897 aa12.78□□□□□ -0.36
CHGA-205ENST00000556098 FAM184AQ8NB25 1140 aa12.78□□□□□ -0.36
CHGA-205ENST00000556098 AGBL1Q96MI9 1066 aa12.78□□□□□ -0.36
CHGA-205ENST00000556098 TCEANC2Q96MN5 208 aa12.78□□□□□ -0.36
CHGA-205ENST00000556098 UBAC1Q9BSL1 405 aa12.78□□□□□ -0.36
CHGA-205ENST00000556098 FTOQ9C0B1 505 aaKnown RBP eCLIP12.78□□□□□ -0.36
CHGA-205ENST00000556098 ZSCAN16Q9H4T2 348 aaPredicted RBP12.78□□□□□ -0.36
CHGA-205ENST00000556098 SLC38A10Q9HBR0 1119 aa12.78□□□□□ -0.36
CHGA-205ENST00000556098 NYAP2Q9P242 653 aa12.78□□□□□ -0.36
CHGA-205ENST00000556098 NEDD4P46934 1319 aa12.78□□□□□ -0.36
CHGA-205ENST00000556098 KLF18A0A0U1RQI7 1052 aa12.77□□□□□ -0.37
CHGA-205ENST00000556098 SOWAHBA6NEL2 793 aa12.77□□□□□ -0.37
CHGA-205ENST00000556098 CCDC69A6NI79 296 aa12.77□□□□□ -0.37
CHGA-205ENST00000556098 ASB14A6NK59 587 aa12.77□□□□□ -0.37
CHGA-205ENST00000556098 GOLGA8BA8MQT2 603 aa12.77□□□□□ -0.37
CHGA-205ENST00000556098 B4E1Z4 1266 aa12.77□□□□□ -0.37
CHGA-205ENST00000556098 CTAGE5O15320 804 aa12.77□□□□□ -0.37
CHGA-205ENST00000556098 CABYRO75952 493 aa12.77□□□□□ -0.37
CHGA-205ENST00000556098 MBD3O95983 291 aa12.77□□□□□ -0.37
CHGA-205ENST00000556098 CALM1P0DP23 149 aa12.77□□□□□ -0.37
CHGA-205ENST00000556098 CALM2P0DP24 149 aa12.77□□□□□ -0.37
CHGA-205ENST00000556098 CALM3P0DP25 149 aa12.77□□□□□ -0.37
CHGA-205ENST00000556098 BMP3P12645 472 aa12.77□□□□□ -0.37
CHGA-205ENST00000556098 SMPD1P17405 629 aa12.77□□□□□ -0.37
CHGA-205ENST00000556098 APOBRQ0VD83 1088 aa12.77□□□□□ -0.37
CHGA-205ENST00000556098 TMEM63BQ5T3F8 832 aa12.77□□□□□ -0.37
CHGA-205ENST00000556098 ATL3Q6DD88 541 aa12.77□□□□□ -0.37
CHGA-205ENST00000556098 NSMFQ6X4W1 530 aa12.77□□□□□ -0.37
CHGA-205ENST00000556098 TMEM87AQ8NBN3 555 aa12.77□□□□□ -0.37
CHGA-205ENST00000556098 CEP95Q96GE4 821 aa12.77□□□□□ -0.37
CHGA-205ENST00000556098 TRERF1Q96PN7 1200 aa12.77□□□□□ -0.37
CHGA-205ENST00000556098 LRFN3Q9BTN0 628 aa12.77□□□□□ -0.37
CHGA-205ENST00000556098 A1CFQ9NQ94 594 aaKnown RBP12.77□□□□□ -0.37
CHGA-205ENST00000556098 TRMT13Q9NUP7 481 aaKnown RBP12.77□□□□□ -0.37
CHGA-205ENST00000556098 ZDHHC9Q9Y397 364 aa12.77□□□□□ -0.37
CHGA-205ENST00000556098 STK36Q9NRP7 1315 aa12.77□□□□□ -0.37
CHGA-205ENST00000556098 MUC3AQ02505 3323 aa12.77□□□□□ -0.37
CHGA-205ENST00000556098 EPOPA6NHQ4 379 aa12.76□□□□□ -0.37
CHGA-205ENST00000556098 CPLX1O14810 134 aa12.76□□□□□ -0.37
CHGA-205ENST00000556098 IFIT3O14879 490 aaKnown RBP12.76□□□□□ -0.37
CHGA-205ENST00000556098 ZBTB43O43298 467 aa12.76□□□□□ -0.37
CHGA-205ENST00000556098 KDM4AO75164 1064 aa12.76□□□□□ -0.37
CHGA-205ENST00000556098 TSPY3P0CV98 308 aa12.76□□□□□ -0.37
CHGA-205ENST00000556098 TSPY8P0CW00 308 aa12.76□□□□□ -0.37
CHGA-205ENST00000556098 ACTN1P12814 892 aa12.76□□□□□ -0.37
CHGA-205ENST00000556098 WTAPQ15007 396 aa12.76□□□□□ -0.37
CHGA-205ENST00000556098 TMEM31Q5JXX7 168 aa12.76□□□□□ -0.37
CHGA-205ENST00000556098 APOA5Q6Q788 366 aa12.76□□□□□ -0.37
CHGA-205ENST00000556098 NECAB1Q8N987 351 aa12.76□□□□□ -0.37
CHGA-205ENST00000556098 NSUN7Q8NE18 718 aaKnown RBP12.76□□□□□ -0.37
CHGA-205ENST00000556098 IGDCC4Q8TDY8 1250 aa12.76□□□□□ -0.37
CHGA-205ENST00000556098 WASF1Q92558 559 aa12.76□□□□□ -0.37
CHGA-205ENST00000556098 KATNBL1Q9H079 304 aa12.76□□□□□ -0.37
CHGA-205ENST00000556098 LY9Q9HBG7 655 aa12.76□□□□□ -0.37
CHGA-205ENST00000556098 GPHNQ9NQX3 736 aaPredicted RBP12.76□□□□□ -0.37
CHGA-205ENST00000556098 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.76□□□□□ -0.37
CHGA-205ENST00000556098 SLC12A7Q9Y666 1083 aa12.76□□□□□ -0.37
CHGA-205ENST00000556098 MTCH2Q9Y6C9 303 aa12.76□□□□□ -0.37
CHGA-205ENST00000556098 GRIN2DO15399 1336 aa12.76□□□□□ -0.37
CHGA-205ENST00000556098 CHD7Q9P2D1 2997 aa12.75□□□□□ -0.37
CHGA-205ENST00000556098 PTPDC1A2A3K4 754 aa12.75□□□□□ -0.37
CHGA-205ENST00000556098 ATP2A1O14983 1001 aa12.75□□□□□ -0.37
CHGA-205ENST00000556098 TNKSO95271 1327 aa12.75□□□□□ -0.37
CHGA-205ENST00000556098 METAP2P50579 478 aaKnown RBP eCLIP12.75□□□□□ -0.37
CHGA-205ENST00000556098 STAT2P52630 851 aa12.75□□□□□ -0.37
CHGA-205ENST00000556098 CTDSPL2Q05D32 466 aa12.75□□□□□ -0.37
CHGA-205ENST00000556098 KLHL40Q2TBA0 621 aa12.75□□□□□ -0.37
CHGA-205ENST00000556098 PPP4R3BQ5MIZ7 849 aa12.75□□□□□ -0.37
CHGA-205ENST00000556098 CYB5R4Q7L1T6 521 aa12.75□□□□□ -0.37
CHGA-205ENST00000556098 FAM133AQ8N9E0 248 aa12.75□□□□□ -0.37
CHGA-205ENST00000556098 OR6J1Q8NGC5 347 aa12.75□□□□□ -0.37
CHGA-205ENST00000556098 PURBQ96QR8 312 aaKnown RBP12.75□□□□□ -0.37
CHGA-205ENST00000556098 LRRC2Q9BYS8 371 aa12.75□□□□□ -0.37
CHGA-205ENST00000556098 ZSWIM5Q9P217 1185 aa12.75□□□□□ -0.37
CHGA-205ENST00000556098 MTUS1Q9ULD2 1270 aa12.75□□□□□ -0.37
CHGA-205ENST00000556098 MTMR6Q9Y217 621 aa12.75□□□□□ -0.37
CHGA-205ENST00000556098 GNEQ9Y223 722 aaKnown RBP12.75□□□□□ -0.37
CHGA-205ENST00000556098 NOD1Q9Y239 953 aa12.75□□□□□ -0.37
CHGA-205ENST00000556098 SCN10AQ9Y5Y9 1956 aa12.75□□□□□ -0.37
CHGA-205ENST00000556098 H3BQV1 296 aa12.74□□□□□ -0.37
CHGA-205ENST00000556098 TRAK2O60296 914 aa12.74□□□□□ -0.37
CHGA-205ENST00000556098 DDAH1O94760 285 aa12.74□□□□□ -0.37
CHGA-205ENST00000556098 TTLL1O95922 423 aa12.74□□□□□ -0.37
CHGA-205ENST00000556098 NCLP19338 710 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms