RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 UNC13DQ70J99 1090 aa11.29□□□□□ -0.6
EFCAB11-209ENST00000556005 APTXQ7Z2E3 356 aaKnown RBP11.29□□□□□ -0.6
EFCAB11-209ENST00000556005 FCHSD1Q86WN1 690 aa11.29□□□□□ -0.6
EFCAB11-209ENST00000556005 ETNPPLQ8TBG4 499 aa11.29□□□□□ -0.6
EFCAB11-209ENST00000556005 NOC3LQ8WTT2 800 aaKnown RBP11.29□□□□□ -0.6
EFCAB11-209ENST00000556005 GJA10Q969M2 543 aa11.29□□□□□ -0.6
EFCAB11-209ENST00000556005 P2RX7Q99572 595 aaKnown RBP11.29□□□□□ -0.6
EFCAB11-209ENST00000556005 KIAA1683Q9H0B3 1180 aa11.29□□□□□ -0.6
EFCAB11-209ENST00000556005 EHMT1Q9H9B1 1298 aa11.29□□□□□ -0.6
EFCAB11-209ENST00000556005 BMP2KQ9NSY1 1161 aaPredicted RBP11.29□□□□□ -0.6
EFCAB11-209ENST00000556005 LIMA1Q9UHB6 759 aaKnown RBP11.29□□□□□ -0.6
EFCAB11-209ENST00000556005 ABCB11O95342 1321 aa11.29□□□□□ -0.6
EFCAB11-209ENST00000556005 PSDA5PKW4 1024 aaPredicted RBP11.29□□□□□ -0.6
EFCAB11-209ENST00000556005 MYMKA6NI61 221 aa11.29□□□□□ -0.6
EFCAB11-209ENST00000556005 FAM86B1E9PN63 330 aa11.29□□□□□ -0.6
EFCAB11-209ENST00000556005 FAM86B2P0C5J1 330 aa11.29□□□□□ -0.6
EFCAB11-209ENST00000556005 PRELPP51888 382 aa11.29□□□□□ -0.6
EFCAB11-209ENST00000556005 TCP11X2Q5H9J9 407 aa11.29□□□□□ -0.6
EFCAB11-209ENST00000556005 PRPF38AQ8NAV1 312 aaKnown RBP11.29□□□□□ -0.6
EFCAB11-209ENST00000556005 ERMNQ8TAM6 284 aa11.29□□□□□ -0.6
EFCAB11-209ENST00000556005 PRIMPOLQ96LW4 560 aa11.29□□□□□ -0.6
EFCAB11-209ENST00000556005 THAP9Q9H5L6 903 aa11.29□□□□□ -0.6
EFCAB11-209ENST00000556005 KCNJ18B7U540 433 aa11.28□□□□□ -0.6
EFCAB11-209ENST00000556005 N4BP3O15049 544 aa11.28□□□□□ -0.6
EFCAB11-209ENST00000556005 COBLO75128 1261 aa11.28□□□□□ -0.6
EFCAB11-209ENST00000556005 CCNE1P24864 410 aa11.28□□□□□ -0.6
EFCAB11-209ENST00000556005 STK4Q13043 487 aa11.28□□□□□ -0.6
EFCAB11-209ENST00000556005 PSMD2Q13200 908 aa11.28□□□□□ -0.6
EFCAB11-209ENST00000556005 KCNJ12Q14500 433 aa11.28□□□□□ -0.6
EFCAB11-209ENST00000556005 KRT31Q15323 416 aa11.28□□□□□ -0.6
EFCAB11-209ENST00000556005 SAMD1Q6SPF0 538 aaPredicted RBP11.28□□□□□ -0.6
EFCAB11-209ENST00000556005 DYMQ7RTS9 669 aa11.28□□□□□ -0.6
EFCAB11-209ENST00000556005 CCDC84Q86UT8 332 aaPredicted RBP11.28□□□□□ -0.6
EFCAB11-209ENST00000556005 LDHDQ86WU2 507 aa11.28□□□□□ -0.6
EFCAB11-209ENST00000556005 CREBRFQ8IUR6 639 aa11.28□□□□□ -0.6
EFCAB11-209ENST00000556005 NLGN2Q8NFZ4 835 aa11.28□□□□□ -0.6
EFCAB11-209ENST00000556005 DDX12PQ92771 950 aa11.28□□□□□ -0.6
EFCAB11-209ENST00000556005 LENG9Q96B70 501 aa11.28□□□□□ -0.6
EFCAB11-209ENST00000556005 TRIM47Q96LD4 638 aa11.28□□□□□ -0.6
EFCAB11-209ENST00000556005 TMX1Q9H3N1 280 aa11.28□□□□□ -0.6
EFCAB11-209ENST00000556005 KIAA1024Q9UPX6 916 aa11.28□□□□□ -0.6
EFCAB11-209ENST00000556005 TRIM49BA6NDI0 452 aa11.27□□□□□ -0.6
EFCAB11-209ENST00000556005 TEX33O43247 280 aa11.27□□□□□ -0.6
EFCAB11-209ENST00000556005 CCP110O43303 1012 aa11.27□□□□□ -0.6
EFCAB11-209ENST00000556005 ICAM1P05362 532 aa11.27□□□□□ -0.6
EFCAB11-209ENST00000556005 FCER1AP12319 257 aa11.27□□□□□ -0.6
EFCAB11-209ENST00000556005 TAL1P17542 331 aaPredicted RBP11.27□□□□□ -0.6
EFCAB11-209ENST00000556005 EEF1GP26641 437 aaKnown RBP11.27□□□□□ -0.6
EFCAB11-209ENST00000556005 USP14P54578 494 aa11.27□□□□□ -0.6
EFCAB11-209ENST00000556005 ECM1Q16610 540 aa11.27□□□□□ -0.6
EFCAB11-209ENST00000556005 APOBEC3FQ8IUX4 373 aaKnown RBP11.27□□□□□ -0.6
EFCAB11-209ENST00000556005 CCAR2Q8N163 923 aaKnown RBP11.27□□□□□ -0.6
EFCAB11-209ENST00000556005 P2RX5Q93086 422 aa11.27□□□□□ -0.6
EFCAB11-209ENST00000556005 SLF1Q9BQI6 1058 aa11.27□□□□□ -0.6
EFCAB11-209ENST00000556005 SRRTQ9BXP5 876 aaKnown RBP11.27□□□□□ -0.6
EFCAB11-209ENST00000556005 FBXO28Q9NVF7 368 aa11.27□□□□□ -0.6
EFCAB11-209ENST00000556005 MAGEC2Q9UBF1 373 aaPredicted RBP11.27□□□□□ -0.6
EFCAB11-209ENST00000556005 RABGAP1Q9Y3P9 1069 aa11.27□□□□□ -0.6
EFCAB11-209ENST00000556005 ASTN2O75129 1339 aaPredicted RBP11.27□□□□□ -0.61
EFCAB11-209ENST00000556005 ZNF541Q9H0D2 1346 aa11.27□□□□□ -0.61
EFCAB11-209ENST00000556005 MSH4O15457 936 aa11.27□□□□□ -0.61
EFCAB11-209ENST00000556005 IDEP14735 1019 aa11.27□□□□□ -0.61
EFCAB11-209ENST00000556005 INPP5BP32019 993 aa11.27□□□□□ -0.61
EFCAB11-209ENST00000556005 PBX1P40424 430 aa11.27□□□□□ -0.61
EFCAB11-209ENST00000556005 COPB1P53618 953 aaKnown RBP11.27□□□□□ -0.61
EFCAB11-209ENST00000556005 PMS1P54277 932 aaKnown RBP11.27□□□□□ -0.61
EFCAB11-209ENST00000556005 SPIRE1Q08AE8 756 aa11.27□□□□□ -0.61
EFCAB11-209ENST00000556005 PTPN21Q16825 1174 aa11.27□□□□□ -0.61
EFCAB11-209ENST00000556005 NBPF12Q5TAG4 269 aaPredicted RBP11.27□□□□□ -0.61
EFCAB11-209ENST00000556005 TTI2Q6NXR4 508 aa11.27□□□□□ -0.61
EFCAB11-209ENST00000556005 KCNK18Q7Z418 384 aa11.27□□□□□ -0.61
EFCAB11-209ENST00000556005 PPFIBP1Q86W92 1011 aa11.27□□□□□ -0.61
EFCAB11-209ENST00000556005 FAM114A1Q8IWE2 563 aa11.27□□□□□ -0.61
EFCAB11-209ENST00000556005 GPC2Q8N158 579 aa11.27□□□□□ -0.61
EFCAB11-209ENST00000556005 KCTD17Q8N5Z5 321 aa11.27□□□□□ -0.61
EFCAB11-209ENST00000556005 CSGALNACT2Q8N6G5 542 aa11.27□□□□□ -0.61
EFCAB11-209ENST00000556005 TBC1D5Q92609 795 aa11.27□□□□□ -0.61
EFCAB11-209ENST00000556005 UPF1Q92900 1129 aaKnown RBP eCLIP11.27□□□□□ -0.61
EFCAB11-209ENST00000556005 C16orf45Q96MC5 204 aaPredicted RBP11.27□□□□□ -0.61
EFCAB11-209ENST00000556005 PNMA2Q9UL42 364 aa11.27□□□□□ -0.61
EFCAB11-209ENST00000556005 CCPG1Q9ULG6 757 aa11.27□□□□□ -0.61
EFCAB11-209ENST00000556005 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.27□□□□□ -0.61
EFCAB11-209ENST00000556005 ITIH6Q6UXX5 1313 aa11.26□□□□□ -0.61
EFCAB11-209ENST00000556005 AKR1B15C9JRZ8 316 aaPredicted RBP11.26□□□□□ -0.61
EFCAB11-209ENST00000556005 STX10O60499 249 aa11.26□□□□□ -0.61
EFCAB11-209ENST00000556005 TPM2P07951 284 aa11.26□□□□□ -0.61
EFCAB11-209ENST00000556005 TPM1P09493 284 aa11.26□□□□□ -0.61
EFCAB11-209ENST00000556005 PLA2G4BP0C869 781 aa11.26□□□□□ -0.61
EFCAB11-209ENST00000556005 TNNT1P13805 278 aa11.26□□□□□ -0.61
EFCAB11-209ENST00000556005 LMNB1P20700 586 aa11.26□□□□□ -0.61
EFCAB11-209ENST00000556005 RPA1P27694 616 aa11.26□□□□□ -0.61
EFCAB11-209ENST00000556005 PTPN14Q15678 1187 aa11.26□□□□□ -0.61
EFCAB11-209ENST00000556005 ANGEL2Q5VTE6 544 aaKnown RBP11.26□□□□□ -0.61
EFCAB11-209ENST00000556005 NCAPH2Q6IBW4 605 aa11.26□□□□□ -0.61
EFCAB11-209ENST00000556005 ARHGAP27Q6ZUM4 889 aa11.26□□□□□ -0.61
EFCAB11-209ENST00000556005 MCF2L2Q86YR7 1114 aa11.26□□□□□ -0.61
EFCAB11-209ENST00000556005 SCYL3Q8IZE3 742 aa11.26□□□□□ -0.61
EFCAB11-209ENST00000556005 TC2NQ8N9U0 490 aa11.26□□□□□ -0.61
EFCAB11-209ENST00000556005 KIAA0895Q8NCT3 520 aa11.26□□□□□ -0.61
EFCAB11-209ENST00000556005 UIMC1Q96RL1 719 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms