RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 DYNC1LI2O43237 492 aaPredicted RBP10.88□□□□□ -0.67
PRKCH-218ENST00000555628 KDM4AO75164 1064 aa10.88□□□□□ -0.67
PRKCH-218ENST00000555628 RGS20O76081 388 aa10.88□□□□□ -0.67
PRKCH-218ENST00000555628 IQCF3P0C7M6 154 aa10.88□□□□□ -0.67
PRKCH-218ENST00000555628 COL19A1Q14993 1142 aa10.88□□□□□ -0.67
PRKCH-218ENST00000555628 LEXMQ3ZCV2 418 aa10.88□□□□□ -0.67
PRKCH-218ENST00000555628 ZKSCAN2Q63HK3 967 aa10.88□□□□□ -0.67
PRKCH-218ENST00000555628 IQSEC1Q6DN90 963 aa10.88□□□□□ -0.67
PRKCH-218ENST00000555628 DEFB128Q7Z7B8 93 aa10.88□□□□□ -0.67
PRKCH-218ENST00000555628 RPAP2Q8IXW5 612 aaPredicted RBP10.88□□□□□ -0.67
PRKCH-218ENST00000555628 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.88□□□□□ -0.67
PRKCH-218ENST00000555628 GDPD5Q8WTR4 605 aa10.88□□□□□ -0.67
PRKCH-218ENST00000555628 DNAJC2Q99543 621 aaKnown RBP10.88□□□□□ -0.67
PRKCH-218ENST00000555628 PUS7LQ9H0K6 701 aaKnown RBP10.88□□□□□ -0.67
PRKCH-218ENST00000555628 UBE2ZQ9H832 354 aaPredicted RBP10.88□□□□□ -0.67
PRKCH-218ENST00000555628 HOMER2Q9NSB8 354 aa10.88□□□□□ -0.67
PRKCH-218ENST00000555628 PAG1Q9NWQ8 432 aa10.88□□□□□ -0.67
PRKCH-218ENST00000555628 CYP39A1Q9NYL5 469 aa10.88□□□□□ -0.67
PRKCH-218ENST00000555628 ARPP21Q9UBL0 812 aaPredicted RBP10.88□□□□□ -0.67
PRKCH-218ENST00000555628 TRIP12Q14669 1992 aaPredicted RBP10.88□□□□□ -0.67
PRKCH-218ENST00000555628 TECTAO75443 2155 aa10.87□□□□□ -0.67
PRKCH-218ENST00000555628 VPS13AQ96RL7 3174 aa10.87□□□□□ -0.67
PRKCH-218ENST00000555628 GSG1L2A8MUP6 293 aa10.87□□□□□ -0.67
PRKCH-218ENST00000555628 RBAK-RBAKDNI3L0D1 243 aa10.87□□□□□ -0.67
PRKCH-218ENST00000555628 BAIAP3O94812 1187 aa10.87□□□□□ -0.67
PRKCH-218ENST00000555628 WDR5P61964 334 aaKnown RBP10.87□□□□□ -0.67
PRKCH-218ENST00000555628 TCTN1Q2MV58 587 aa10.87□□□□□ -0.67
PRKCH-218ENST00000555628 DUSP28Q4G0W2 176 aa10.87□□□□□ -0.67
PRKCH-218ENST00000555628 GJD3Q8N144 294 aa10.87□□□□□ -0.67
PRKCH-218ENST00000555628 THAP11Q96EK4 314 aa10.87□□□□□ -0.67
PRKCH-218ENST00000555628 CEP95Q96GE4 821 aa10.87□□□□□ -0.67
PRKCH-218ENST00000555628 HAUS7Q99871 368 aa10.87□□□□□ -0.67
PRKCH-218ENST00000555628 AP5M1Q9H0R1 490 aa10.87□□□□□ -0.67
PRKCH-218ENST00000555628 SUGCTQ9HAC7 445 aa10.87□□□□□ -0.67
PRKCH-218ENST00000555628 EPB41L4AQ9HCS5 686 aaPredicted RBP10.87□□□□□ -0.67
PRKCH-218ENST00000555628 VTA1Q9NP79 307 aa10.87□□□□□ -0.67
PRKCH-218ENST00000555628 RNF146Q9NTX7 359 aa10.87□□□□□ -0.67
PRKCH-218ENST00000555628 MTMR4Q9NYA4 1195 aa10.87□□□□□ -0.67
PRKCH-218ENST00000555628 SLC4A4Q9Y6R1 1079 aa10.87□□□□□ -0.67
PRKCH-218ENST00000555628 ZDBF2Q9HCK1 2354 aa10.87□□□□□ -0.67
PRKCH-218ENST00000555628 SPTBN4Q9H254 2564 aa10.86□□□□□ -0.67
PRKCH-218ENST00000555628 COL4A6Q14031 1691 aa10.86□□□□□ -0.67
PRKCH-218ENST00000555628 RAD21O60216 631 aa10.86□□□□□ -0.67
PRKCH-218ENST00000555628 ZEB2O60315 1214 aa10.86□□□□□ -0.67
PRKCH-218ENST00000555628 S1PR4O95977 384 aa10.86□□□□□ -0.67
PRKCH-218ENST00000555628 SUPT20HL2P0C7V6 817 aa10.86□□□□□ -0.67
PRKCH-218ENST00000555628 FDX1P10109 184 aa10.86□□□□□ -0.67
PRKCH-218ENST00000555628 IL9P15248 144 aa10.86□□□□□ -0.67
PRKCH-218ENST00000555628 ATP5JP18859 108 aa10.86□□□□□ -0.67
PRKCH-218ENST00000555628 ERVK-21P61565 698 aa10.86□□□□□ -0.67
PRKCH-218ENST00000555628 RBL2Q08999 1139 aa10.86□□□□□ -0.67
PRKCH-218ENST00000555628 MUM1L1Q5H9M0 696 aa10.86□□□□□ -0.67
PRKCH-218ENST00000555628 TMCO2Q7Z6W1 182 aaPredicted RBP10.86□□□□□ -0.67
PRKCH-218ENST00000555628 PARP9Q8IXQ6 854 aa10.86□□□□□ -0.67
PRKCH-218ENST00000555628 FBXL18Q96ME1 805 aa10.86□□□□□ -0.67
PRKCH-218ENST00000555628 PURBQ96QR8 312 aaKnown RBP10.86□□□□□ -0.67
PRKCH-218ENST00000555628 STRBPQ96SI9 672 aaKnown RBP10.86□□□□□ -0.67
PRKCH-218ENST00000555628 KCNH6Q9H252 994 aa10.86□□□□□ -0.67
PRKCH-218ENST00000555628 CLIP2Q9UDT6 1046 aa10.86□□□□□ -0.67
PRKCH-218ENST00000555628 RNF223E7ERA6 249 aa10.85□□□□□ -0.67
PRKCH-218ENST00000555628 PLA2G6O60733 806 aa10.85□□□□□ -0.67
PRKCH-218ENST00000555628 ADH1BP00325 375 aa10.85□□□□□ -0.67
PRKCH-218ENST00000555628 ACTN1P12814 892 aa10.85□□□□□ -0.67
PRKCH-218ENST00000555628 DEFB103AP81534 67 aa10.85□□□□□ -0.67
PRKCH-218ENST00000555628 NBPF20Q3BBV1 942 aa10.85□□□□□ -0.67
PRKCH-218ENST00000555628 TKFCQ3LXA3 575 aa10.85□□□□□ -0.67
PRKCH-218ENST00000555628 NFRKBQ6P4R8 1299 aa10.85□□□□□ -0.67
PRKCH-218ENST00000555628 GIMAP6Q6P9H5 292 aa10.85□□□□□ -0.67
PRKCH-218ENST00000555628 NOL8Q76FK4 1167 aaKnown RBP10.85□□□□□ -0.67
PRKCH-218ENST00000555628 EEPD1Q7L9B9 569 aa10.85□□□□□ -0.67
PRKCH-218ENST00000555628 SIRT2Q8IXJ6 389 aa10.85□□□□□ -0.67
PRKCH-218ENST00000555628 LRRC47Q8N1G4 583 aaKnown RBP10.85□□□□□ -0.67
PRKCH-218ENST00000555628 NEK9Q8TD19 979 aa10.85□□□□□ -0.67
PRKCH-218ENST00000555628 PPP1R13LQ8WUF5 828 aa10.85□□□□□ -0.67
PRKCH-218ENST00000555628 DHX38Q92620 1227 aaKnown RBP10.85□□□□□ -0.67
PRKCH-218ENST00000555628 ANKS1AQ92625 1134 aa10.85□□□□□ -0.67
PRKCH-218ENST00000555628 GMCL1Q96IK5 515 aa10.85□□□□□ -0.67
PRKCH-218ENST00000555628 SPSB2Q99619 263 aa10.85□□□□□ -0.67
PRKCH-218ENST00000555628 POLR3EQ9NVU0 708 aa10.85□□□□□ -0.67
PRKCH-218ENST00000555628 CACNA1AO00555 2505 aa10.84□□□□□ -0.67
PRKCH-218ENST00000555628 LINC01553A4QN01 128 aa10.84□□□□□ -0.67
PRKCH-218ENST00000555628 A6NJR5 290 aa10.84□□□□□ -0.67
PRKCH-218ENST00000555628 GJB5O95377 273 aa10.84□□□□□ -0.67
PRKCH-218ENST00000555628 CXCL10P02778 98 aa10.84□□□□□ -0.67
PRKCH-218ENST00000555628 BMP3P12645 472 aa10.84□□□□□ -0.67
PRKCH-218ENST00000555628 GUCA2AQ02747 115 aa10.84□□□□□ -0.67
PRKCH-218ENST00000555628 BRICD5Q6PL45 260 aa10.84□□□□□ -0.67
PRKCH-218ENST00000555628 TRAF7Q6Q0C0 670 aa10.84□□□□□ -0.67
PRKCH-218ENST00000555628 RASGRP2Q7LDG7 609 aa10.84□□□□□ -0.67
PRKCH-218ENST00000555628 ITPRIPQ8IWB1 547 aa10.84□□□□□ -0.67
PRKCH-218ENST00000555628 AMOTL1Q8IY63 956 aa10.84□□□□□ -0.67
PRKCH-218ENST00000555628 FAM160A2Q8N612 972 aaPredicted RBP10.84□□□□□ -0.67
PRKCH-218ENST00000555628 KIF1BPQ96EK5 621 aa10.84□□□□□ -0.67
PRKCH-218ENST00000555628 TRERF1Q96PN7 1200 aa10.84□□□□□ -0.67
PRKCH-218ENST00000555628 MTG1Q9BT17 334 aaPredicted RBP10.84□□□□□ -0.67
PRKCH-218ENST00000555628 BOLA2Q9H3K6 86 aa10.84□□□□□ -0.67
PRKCH-218ENST00000555628 COG6Q9Y2V7 657 aa10.84□□□□□ -0.67
PRKCH-218ENST00000555628 MYO7AQ13402 2215 aa10.84□□□□□ -0.67
PRKCH-218ENST00000555628 MICAL3Q7RTP6 2002 aa10.84□□□□□ -0.67
PRKCH-218ENST00000555628 LOC102724159A0A0B4J2E5 919 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms