RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 SLC20A2Q08357 652 aa17.95■□□□□ 0.46
TUBB3-209ENST00000555609 CCDC96Q2M329 555 aa17.95■□□□□ 0.46
TUBB3-209ENST00000555609 SLC39A2Q9NP94 309 aa17.95■□□□□ 0.46
TUBB3-209ENST00000555609 JADE2Q9NQC1 790 aa17.95■□□□□ 0.46
TUBB3-209ENST00000555609 BIN2Q9UBW5 565 aaPredicted RBP17.95■□□□□ 0.46
TUBB3-209ENST00000555609 MYO3BQ8WXR4 1341 aa17.95■□□□□ 0.46
TUBB3-209ENST00000555609 CLSTN1O94985 981 aa17.95■□□□□ 0.46
TUBB3-209ENST00000555609 GNA14O95837 355 aa17.95■□□□□ 0.46
TUBB3-209ENST00000555609 GCFC2P16383 781 aaKnown RBP17.95■□□□□ 0.46
TUBB3-209ENST00000555609 KIF11P52732 1056 aa17.95■□□□□ 0.46
TUBB3-209ENST00000555609 RHBDL3P58872 404 aa17.95■□□□□ 0.46
TUBB3-209ENST00000555609 GRIK5Q16478 980 aa17.95■□□□□ 0.46
TUBB3-209ENST00000555609 GLT8D2Q9H1C3 349 aa17.95■□□□□ 0.46
TUBB3-209ENST00000555609 LUC7LQ9NQ29 371 aaKnown RBP17.95■□□□□ 0.46
TUBB3-209ENST00000555609 PDHBP11177 359 aa17.94■□□□□ 0.46
TUBB3-209ENST00000555609 GYS2P54840 703 aa17.94■□□□□ 0.46
TUBB3-209ENST00000555609 CREG2Q8IUH2 290 aa17.94■□□□□ 0.46
TUBB3-209ENST00000555609 CEP63Q96MT8 703 aa17.94■□□□□ 0.46
TUBB3-209ENST00000555609 DEF6Q9H4E7 631 aa17.94■□□□□ 0.46
TUBB3-209ENST00000555609 ARHGAP20Q9P2F6 1191 aa17.94■□□□□ 0.46
TUBB3-209ENST00000555609 CCNL1Q9UK58 526 aaPredicted RBP17.94■□□□□ 0.46
TUBB3-209ENST00000555609 FAM184BQ9ULE4 1060 aa17.94■□□□□ 0.46
TUBB3-209ENST00000555609 MTMR7Q9Y216 660 aa17.94■□□□□ 0.46
TUBB3-209ENST00000555609 SUGT1Q9Y2Z0 365 aa17.94■□□□□ 0.46
TUBB3-209ENST00000555609 HYOU1Q9Y4L1 999 aa17.94■□□□□ 0.46
TUBB3-209ENST00000555609 USP17L5A8MUK1 530 aa17.93■□□□□ 0.46
TUBB3-209ENST00000555609 ZNF263O14978 683 aa17.93■□□□□ 0.46
TUBB3-209ENST00000555609 SRGAP2O75044 1071 aa17.93■□□□□ 0.46
TUBB3-209ENST00000555609 N4BP1O75113 896 aaKnown RBP17.93■□□□□ 0.46
TUBB3-209ENST00000555609 RFC4P35249 363 aa17.93■□□□□ 0.46
TUBB3-209ENST00000555609 RAD51AP2Q09MP3 1159 aa17.93■□□□□ 0.46
TUBB3-209ENST00000555609 GLE1Q53GS7 698 aaKnown RBP17.93■□□□□ 0.46
TUBB3-209ENST00000555609 HYIQ5T013 277 aa17.93■□□□□ 0.46
TUBB3-209ENST00000555609 TRAPPC3LQ5T215 181 aa17.93■□□□□ 0.46
TUBB3-209ENST00000555609 C2CD5Q86YS7 1000 aa17.93■□□□□ 0.46
TUBB3-209ENST00000555609 CNBD1Q8NA66 436 aa17.93■□□□□ 0.46
TUBB3-209ENST00000555609 CAPZA3Q96KX2 299 aa17.93■□□□□ 0.46
TUBB3-209ENST00000555609 CRACR2AQ9BSW2 395 aa17.93■□□□□ 0.46
TUBB3-209ENST00000555609 BMP2KQ9NSY1 1161 aaPredicted RBP17.93■□□□□ 0.46
TUBB3-209ENST00000555609 MTMR4Q9NYA4 1195 aa17.93■□□□□ 0.46
TUBB3-209ENST00000555609 GGA1Q9UJY5 639 aa17.93■□□□□ 0.46
TUBB3-209ENST00000555609 PNMA6FA0A0J9YX94 578 aa17.92■□□□□ 0.46
TUBB3-209ENST00000555609 RBAK-RBAKDNI3L0D1 243 aa17.92■□□□□ 0.46
TUBB3-209ENST00000555609 AKR1B10O60218 316 aa17.92■□□□□ 0.46
TUBB3-209ENST00000555609 SYF2O95926 243 aaKnown RBP17.92■□□□□ 0.46
TUBB3-209ENST00000555609 TNFRSF8P28908 595 aa17.92■□□□□ 0.46
TUBB3-209ENST00000555609 EIF4A3P38919 411 aaKnown RBP17.92■□□□□ 0.46
TUBB3-209ENST00000555609 TNNT3P45378 269 aaPredicted RBP17.92■□□□□ 0.46
TUBB3-209ENST00000555609 GPSM2P81274 684 aa17.92■□□□□ 0.46
TUBB3-209ENST00000555609 PDXDC1Q6P996 788 aa17.92■□□□□ 0.46
TUBB3-209ENST00000555609 LRRC55Q6ZSA7 311 aa17.92■□□□□ 0.46
TUBB3-209ENST00000555609 PTF1AQ7RTS3 328 aa17.92■□□□□ 0.46
TUBB3-209ENST00000555609 AFAP1L1Q8TED9 768 aa17.92■□□□□ 0.46
TUBB3-209ENST00000555609 NT5C3AQ9H0P0 336 aa17.92■□□□□ 0.46
TUBB3-209ENST00000555609 VAT1LQ9HCJ6 419 aa17.92■□□□□ 0.46
TUBB3-209ENST00000555609 KDM3AQ9Y4C1 1321 aa17.92■□□□□ 0.46
TUBB3-209ENST00000555609 IGKV6D-41A0A0C4DH26 115 aa17.92■□□□□ 0.46
TUBB3-209ENST00000555609 A0A0U1RQG5 324 aaPredicted RBP17.92■□□□□ 0.46
TUBB3-209ENST00000555609 MACROD2A1Z1Q3 448 aa17.92■□□□□ 0.46
TUBB3-209ENST00000555609 RNF40O75150 1001 aa17.92■□□□□ 0.46
TUBB3-209ENST00000555609 BBOX1O75936 387 aa17.92■□□□□ 0.46
TUBB3-209ENST00000555609 PRPF6O94906 941 aaKnown RBP17.92■□□□□ 0.46
TUBB3-209ENST00000555609 ADRA2BP18089 450 aa17.92■□□□□ 0.46
TUBB3-209ENST00000555609 MAGEA1P43355 309 aa17.92■□□□□ 0.46
TUBB3-209ENST00000555609 FKBP3Q00688 224 aaKnown RBP17.92■□□□□ 0.46
TUBB3-209ENST00000555609 CYP27A1Q02318 531 aa17.92■□□□□ 0.46
TUBB3-209ENST00000555609 NFIXQ14938 502 aa17.92■□□□□ 0.46
TUBB3-209ENST00000555609 ASTE1Q2TB18 679 aaPredicted RBP17.92■□□□□ 0.46
TUBB3-209ENST00000555609 MYOCDQ8IZQ8 938 aa17.92■□□□□ 0.46
TUBB3-209ENST00000555609 SNX29Q8TEQ0 813 aa17.92■□□□□ 0.46
TUBB3-209ENST00000555609 BAP1Q92560 729 aa17.92■□□□□ 0.46
TUBB3-209ENST00000555609 RPGRQ92834 1020 aaKnown RBP17.92■□□□□ 0.46
TUBB3-209ENST00000555609 RBM17Q96I25 401 aaKnown RBP17.92■□□□□ 0.46
TUBB3-209ENST00000555609 CDK5RAP2Q96SN8 1893 aa17.92■□□□□ 0.46
TUBB3-209ENST00000555609 MMRN2Q9H8L6 949 aa17.92■□□□□ 0.46
TUBB3-209ENST00000555609 SWAP70Q9UH65 585 aa17.92■□□□□ 0.46
TUBB3-209ENST00000555609 PDE2AO00408 941 aaPredicted RBP17.91■□□□□ 0.46
TUBB3-209ENST00000555609 PAFAH1B1P43034 410 aa17.91■□□□□ 0.46
TUBB3-209ENST00000555609 MRPL12P52815 198 aaKnown RBP17.91■□□□□ 0.46
TUBB3-209ENST00000555609 MARSP56192 900 aaKnown RBP17.91■□□□□ 0.46
TUBB3-209ENST00000555609 KCNQ4P56696 695 aa17.91■□□□□ 0.46
TUBB3-209ENST00000555609 GABPAQ06546 454 aa17.91■□□□□ 0.46
TUBB3-209ENST00000555609 CRY2Q49AN0 593 aa17.91■□□□□ 0.46
TUBB3-209ENST00000555609 CCDC24Q8N4L8 307 aa17.91■□□□□ 0.46
TUBB3-209ENST00000555609 AENQ8WTP8 325 aaKnown RBP17.91■□□□□ 0.46
TUBB3-209ENST00000555609 DDX12PQ92771 950 aa17.91■□□□□ 0.46
TUBB3-209ENST00000555609 CEP72Q9P209 647 aa17.91■□□□□ 0.46
TUBB3-209ENST00000555609 ZC3H4Q9UPT8 1303 aaKnown RBP17.91■□□□□ 0.46
TUBB3-209ENST00000555609 UFL1O94874 794 aa17.9■□□□□ 0.46
TUBB3-209ENST00000555609 TRIM37O94972 964 aa17.9■□□□□ 0.46
TUBB3-209ENST00000555609 CLK2P49760 499 aaKnown RBP17.9■□□□□ 0.46
TUBB3-209ENST00000555609 IRX5P78411 483 aaPredicted RBP17.9■□□□□ 0.46
TUBB3-209ENST00000555609 RRAGAQ7L523 313 aa17.9■□□□□ 0.46
TUBB3-209ENST00000555609 NOX5Q96PH1 765 aa17.9■□□□□ 0.46
TUBB3-209ENST00000555609 OSBPL9Q96SU4 736 aa17.9■□□□□ 0.46
TUBB3-209ENST00000555609 SELENOOQ9BVL4 669 aa17.9■□□□□ 0.46
TUBB3-209ENST00000555609 CPVLQ9H3G5 476 aa17.9■□□□□ 0.46
TUBB3-209ENST00000555609 FAM204AQ9H8W3 233 aa17.9■□□□□ 0.46
TUBB3-209ENST00000555609 TMEM260Q9NX78 707 aa17.9■□□□□ 0.46
TUBB3-209ENST00000555609 TFR2Q9UP52 801 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms