RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 PPP1R13BQ96KQ4 1090 aa13.54□□□□□ -0.24
ARHGEF40-206ENST00000555232 TOPAZ1Q8N9V7 1692 aa13.53□□□□□ -0.24
ARHGEF40-206ENST00000555232 CTAGE9A4FU28 777 aa13.53□□□□□ -0.24
ARHGEF40-206ENST00000555232 ARHGAP6O43182 974 aa13.53□□□□□ -0.24
ARHGEF40-206ENST00000555232 BIRC3Q13489 604 aa13.53□□□□□ -0.24
ARHGEF40-206ENST00000555232 CCDC155Q8N6L0 562 aa13.53□□□□□ -0.24
ARHGEF40-206ENST00000555232 EP400Q96L91 3159 aa13.53□□□□□ -0.24
ARHGEF40-206ENST00000555232 PLA2G4BP0C869 781 aa13.53□□□□□ -0.24
ARHGEF40-206ENST00000555232 DLATP10515 647 aaKnown RBP13.53□□□□□ -0.24
ARHGEF40-206ENST00000555232 TMC4Q7Z404 712 aa13.53□□□□□ -0.24
ARHGEF40-206ENST00000555232 AGBL1Q96MI9 1066 aa13.53□□□□□ -0.24
ARHGEF40-206ENST00000555232 CNOT7Q9UIV1 285 aaKnown RBP13.53□□□□□ -0.24
ARHGEF40-206ENST00000555232 WDR19Q8NEZ3 1342 aa13.53□□□□□ -0.24
ARHGEF40-206ENST00000555232 LRRN2O75325 713 aa13.53□□□□□ -0.24
ARHGEF40-206ENST00000555232 NR2F2P24468 414 aa13.53□□□□□ -0.24
ARHGEF40-206ENST00000555232 MARK3P27448 753 aa13.53□□□□□ -0.24
ARHGEF40-206ENST00000555232 SF3A3Q12874 501 aaKnown RBP eCLIP13.53□□□□□ -0.242e-6■■■□□ 16.9
ARHGEF40-206ENST00000555232 SULF1Q8IWU6 871 aa13.53□□□□□ -0.24
ARHGEF40-206ENST00000555232 GPATCH11Q8N954 259 aa13.53□□□□□ -0.24
ARHGEF40-206ENST00000555232 LSM14BQ9BX40 385 aaKnown RBP13.53□□□□□ -0.24
ARHGEF40-206ENST00000555232 GLIS2Q9BZE0 524 aaPredicted RBP13.53□□□□□ -0.24
ARHGEF40-206ENST00000555232 LUC7LQ9NQ29 371 aaKnown RBP13.53□□□□□ -0.24
ARHGEF40-206ENST00000555232 KCTD19Q17RG1 926 aaPredicted RBP13.52□□□□□ -0.24
ARHGEF40-206ENST00000555232 APOBEC3HQ6NTF7 200 aaKnown RBP13.52□□□□□ -0.24
ARHGEF40-206ENST00000555232 FAM178BQ8IXR5 827 aa13.52□□□□□ -0.24
ARHGEF40-206ENST00000555232 FUCA2Q9BTY2 467 aa13.52□□□□□ -0.24
ARHGEF40-206ENST00000555232 RABGAP1Q9Y3P9 1069 aa13.52□□□□□ -0.24
ARHGEF40-206ENST00000555232 KIF1AQ12756 1690 aa13.52□□□□□ -0.24
ARHGEF40-206ENST00000555232 KIF2AO00139 706 aaPredicted RBP13.52□□□□□ -0.25
ARHGEF40-206ENST00000555232 KRT13P13646 458 aa13.52□□□□□ -0.25
ARHGEF40-206ENST00000555232 TRAPPC10P48553 1259 aa13.52□□□□□ -0.25
ARHGEF40-206ENST00000555232 KLK7P49862 253 aa13.52□□□□□ -0.25
ARHGEF40-206ENST00000555232 RHBDL3P58872 404 aa13.52□□□□□ -0.25
ARHGEF40-206ENST00000555232 MTMR2Q13614 643 aa13.52□□□□□ -0.25
ARHGEF40-206ENST00000555232 RTKN2Q8IZC4 609 aa13.52□□□□□ -0.25
ARHGEF40-206ENST00000555232 GLG1Q92896 1179 aa13.52□□□□□ -0.25
ARHGEF40-206ENST00000555232 MORC2Q9Y6X9 1032 aaPredicted RBP13.52□□□□□ -0.25
ARHGEF40-206ENST00000555232 ZNF70Q9UC06 446 aaPredicted RBP13.52□□□□□ -0.25
ARHGEF40-206ENST00000555232 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.52□□□□□ -0.25
ARHGEF40-206ENST00000555232 SALL1Q9NSC2 1324 aa13.52□□□□□ -0.25
ARHGEF40-206ENST00000555232 INPP5BP32019 993 aa13.51□□□□□ -0.25
ARHGEF40-206ENST00000555232 MAGEA1P43355 309 aa13.51□□□□□ -0.25
ARHGEF40-206ENST00000555232 CXCL9Q07325 125 aa13.51□□□□□ -0.25
ARHGEF40-206ENST00000555232 TNFAIP1Q13829 316 aa13.51□□□□□ -0.25
ARHGEF40-206ENST00000555232 ANGEL2Q5VTE6 544 aaKnown RBP13.51□□□□□ -0.25
ARHGEF40-206ENST00000555232 NLRX1Q86UT6 975 aa13.51□□□□□ -0.25
ARHGEF40-206ENST00000555232 ENOX1Q8TC92 643 aaKnown RBP13.51□□□□□ -0.25
ARHGEF40-206ENST00000555232 P2RX5Q93086 422 aa13.51□□□□□ -0.25
ARHGEF40-206ENST00000555232 NUDT12Q9BQG2 462 aa13.51□□□□□ -0.25
ARHGEF40-206ENST00000555232 TRIM31Q9BZY9 425 aa13.51□□□□□ -0.25
ARHGEF40-206ENST00000555232 LRRC27Q9C0I9 530 aa13.51□□□□□ -0.25
ARHGEF40-206ENST00000555232 BCCIPQ9P287 314 aaKnown RBP eCLIP13.51□□□□□ -0.25
ARHGEF40-206ENST00000555232 ZNF658Q5TYW1 1059 aaPredicted RBP13.51□□□□□ -0.25
ARHGEF40-206ENST00000555232 FBXO38Q6PIJ6 1188 aa13.51□□□□□ -0.25
ARHGEF40-206ENST00000555232 OR8K1Q8NGG5 319 aa13.51□□□□□ -0.25
ARHGEF40-206ENST00000555232 IFT81Q8WYA0 676 aa13.51□□□□□ -0.25
ARHGEF40-206ENST00000555232 ANAPC4Q9UJX5 808 aa13.51□□□□□ -0.25
ARHGEF40-206ENST00000555232 PAFAH1B1P43034 410 aa13.51□□□□□ -0.25
ARHGEF40-206ENST00000555232 PPP2R3AQ06190 1150 aa13.51□□□□□ -0.25
ARHGEF40-206ENST00000555232 KRT26Q7Z3Y9 468 aa13.51□□□□□ -0.25
ARHGEF40-206ENST00000555232 K7ENM7 598 aa13.5□□□□□ -0.25
ARHGEF40-206ENST00000555232 KRT86O43790 486 aa13.5□□□□□ -0.25
ARHGEF40-206ENST00000555232 KRT5P13647 590 aa13.5□□□□□ -0.25
ARHGEF40-206ENST00000555232 GMPSP49915 693 aaPredicted RBP13.5□□□□□ -0.25
ARHGEF40-206ENST00000555232 VSTM4Q8IW00 320 aa13.5□□□□□ -0.25
ARHGEF40-206ENST00000555232 METTL13Q8N6R0 699 aa13.5□□□□□ -0.25
ARHGEF40-206ENST00000555232 PRR12Q9ULL5 1215 aa13.5□□□□□ -0.25
ARHGEF40-206ENST00000555232 CSADQ9Y600 493 aa13.5□□□□□ -0.25
ARHGEF40-206ENST00000555232 CTAGE15A4D2H0 777 aa13.5□□□□□ -0.25
ARHGEF40-206ENST00000555232 ACTN4O43707 911 aaKnown RBP13.5□□□□□ -0.25
ARHGEF40-206ENST00000555232 CTAGE8P0CG41 777 aa13.5□□□□□ -0.25
ARHGEF40-206ENST00000555232 NF2P35240 595 aa13.5□□□□□ -0.25
ARHGEF40-206ENST00000555232 PPP4CP60510 307 aa13.5□□□□□ -0.25
ARHGEF40-206ENST00000555232 ETF1P62495 437 aaKnown RBP13.5□□□□□ -0.25
ARHGEF40-206ENST00000555232 CTAGE6Q86UF2 777 aa13.5□□□□□ -0.25
ARHGEF40-206ENST00000555232 VPS36Q86VN1 386 aa13.5□□□□□ -0.25
ARHGEF40-206ENST00000555232 CTAGE4Q8IX94 777 aa13.5□□□□□ -0.25
ARHGEF40-206ENST00000555232 JAKMIP2Q96AA8 810 aa13.5□□□□□ -0.25
ARHGEF40-206ENST00000555232 RNF181Q9P0P0 153 aa13.5□□□□□ -0.25
ARHGEF40-206ENST00000555232 FEZ2Q9UHY8 353 aaPredicted RBP13.5□□□□□ -0.25
ARHGEF40-206ENST00000555232 MRPL11Q9Y3B7 192 aaKnown RBP13.5□□□□□ -0.25
ARHGEF40-206ENST00000555232 PEX10O60683 326 aa13.5□□□□□ -0.25
ARHGEF40-206ENST00000555232 OSTNP61366 133 aa13.5□□□□□ -0.25
ARHGEF40-206ENST00000555232 DNAAF5Q86Y56 855 aa13.5□□□□□ -0.25
ARHGEF40-206ENST00000555232 HOMEZQ8IX15 550 aa13.5□□□□□ -0.25
ARHGEF40-206ENST00000555232 TTC16Q8NEE8 873 aa13.5□□□□□ -0.25
ARHGEF40-206ENST00000555232 ZNRF3Q9ULT6 936 aa13.5□□□□□ -0.25
ARHGEF40-206ENST00000555232 IKBKBO14920 756 aa13.49□□□□□ -0.25
ARHGEF40-206ENST00000555232 ASNSP08243 561 aa13.49□□□□□ -0.25
ARHGEF40-206ENST00000555232 SHMT1P34896 483 aa13.49□□□□□ -0.25
ARHGEF40-206ENST00000555232 GTF2A1P52655 376 aaPredicted RBP13.49□□□□□ -0.25
ARHGEF40-206ENST00000555232 KLHL30Q0D2K2 578 aa13.49□□□□□ -0.25
ARHGEF40-206ENST00000555232 SLC35F6Q8N357 371 aa13.49□□□□□ -0.25
ARHGEF40-206ENST00000555232 OTUD5Q96G74 571 aa13.49□□□□□ -0.25
ARHGEF40-206ENST00000555232 CHP1Q99653 195 aa13.49□□□□□ -0.25
ARHGEF40-206ENST00000555232 IMPACTQ9P2X3 320 aa13.49□□□□□ -0.25
ARHGEF40-206ENST00000555232 FRMD4BQ9Y2L6 1034 aa13.49□□□□□ -0.25
ARHGEF40-206ENST00000555232 NOP56O00567 594 aaKnown RBP13.49□□□□□ -0.25
ARHGEF40-206ENST00000555232 ZBTB39O15060 712 aa13.49□□□□□ -0.25
ARHGEF40-206ENST00000555232 EPB41P11171 864 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms