RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 PSMC4P43686 418 aa12.23□□□□□ -0.45
TDP1-211ENST00000555178 TRAPPC10P48553 1259 aa12.23□□□□□ -0.45
TDP1-211ENST00000555178 ALDH5A1P51649 535 aaPredicted RBP12.23□□□□□ -0.45
TDP1-211ENST00000555178 CCNA1P78396 465 aa12.23□□□□□ -0.45
TDP1-211ENST00000555178 TRAF1Q13077 416 aa12.23□□□□□ -0.45
TDP1-211ENST00000555178 PTGDRQ13258 359 aa12.23□□□□□ -0.45
TDP1-211ENST00000555178 AP3B2Q13367 1082 aa12.23□□□□□ -0.45
TDP1-211ENST00000555178 GRB14Q14449 540 aa12.23□□□□□ -0.45
TDP1-211ENST00000555178 KCTD2Q14681 263 aa12.23□□□□□ -0.45
TDP1-211ENST00000555178 SPECC1Q5M775 1068 aa12.23□□□□□ -0.45
TDP1-211ENST00000555178 EEPD1Q7L9B9 569 aa12.23□□□□□ -0.45
TDP1-211ENST00000555178 WDR11Q9BZH6 1224 aa12.23□□□□□ -0.45
TDP1-211ENST00000555178 FBXO40Q9UH90 709 aa12.23□□□□□ -0.45
TDP1-211ENST00000555178 DNAH12Q6ZR08 3092 aa12.23□□□□□ -0.45
TDP1-211ENST00000555178 GPR25O00155 361 aa12.23□□□□□ -0.45
TDP1-211ENST00000555178 ARP10275 920 aa12.23□□□□□ -0.45
TDP1-211ENST00000555178 AXDND1Q5T1B0 1012 aaPredicted RBP12.23□□□□□ -0.45
TDP1-211ENST00000555178 ARHGEF16Q5VV41 709 aa12.23□□□□□ -0.45
TDP1-211ENST00000555178 USP6NLQ92738 828 aa12.23□□□□□ -0.45
TDP1-211ENST00000555178 CFHR5Q9BXR6 569 aa12.23□□□□□ -0.45
TDP1-211ENST00000555178 GLT8D2Q9H1C3 349 aa12.23□□□□□ -0.45
TDP1-211ENST00000555178 GOLPH3LQ9H4A5 285 aa12.23□□□□□ -0.45
TDP1-211ENST00000555178 TRAK2O60296 914 aa12.22□□□□□ -0.45
TDP1-211ENST00000555178 FOSP01100 380 aaPredicted RBP12.22□□□□□ -0.45
TDP1-211ENST00000555178 NR3C2P08235 984 aa12.22□□□□□ -0.45
TDP1-211ENST00000555178 LIG1P18858 919 aa12.22□□□□□ -0.45
TDP1-211ENST00000555178 MAPK4P31152 587 aa12.22□□□□□ -0.45
TDP1-211ENST00000555178 UBE2HP62256 183 aa12.22□□□□□ -0.45
TDP1-211ENST00000555178 SP3Q02447 781 aa12.22□□□□□ -0.45
TDP1-211ENST00000555178 SEMA3FQ13275 785 aa12.22□□□□□ -0.45
TDP1-211ENST00000555178 CCAR1Q8IX12 1150 aaKnown RBP12.22□□□□□ -0.45
TDP1-211ENST00000555178 KCNG4Q8TDN1 519 aa12.22□□□□□ -0.45
TDP1-211ENST00000555178 ZNF296Q8WUU4 475 aaPredicted RBP12.22□□□□□ -0.45
TDP1-211ENST00000555178 HAS1Q92839 578 aa12.22□□□□□ -0.45
TDP1-211ENST00000555178 WBP1LQ9NX94 342 aa12.22□□□□□ -0.45
TDP1-211ENST00000555178 PKD2L1Q9P0L9 805 aa12.22□□□□□ -0.45
TDP1-211ENST00000555178 FBXO2Q9UK22 296 aaPredicted RBP12.22□□□□□ -0.45
TDP1-211ENST00000555178 PFASO15067 1338 aa12.22□□□□□ -0.45
TDP1-211ENST00000555178 TNPO2O14787 897 aaKnown RBP12.22□□□□□ -0.45
TDP1-211ENST00000555178 SORBS3O60504 671 aa12.22□□□□□ -0.45
TDP1-211ENST00000555178 CYP2B6P20813 491 aa12.22□□□□□ -0.45
TDP1-211ENST00000555178 ATP2C1P98194 919 aaPredicted RBP12.22□□□□□ -0.45
TDP1-211ENST00000555178 PRR16Q569H4 304 aa12.22□□□□□ -0.45
TDP1-211ENST00000555178 PRAMEF19Q5SWL8 479 aa12.22□□□□□ -0.45
TDP1-211ENST00000555178 VSIG10LQ86VR7 867 aa12.22□□□□□ -0.45
TDP1-211ENST00000555178 REM2Q8IYK8 340 aaPredicted RBP12.22□□□□□ -0.45
TDP1-211ENST00000555178 PNMA2Q9UL42 364 aa12.22□□□□□ -0.45
TDP1-211ENST00000555178 NEMFO60524 1076 aa12.21□□□□□ -0.45
TDP1-211ENST00000555178 ATP9AO75110 1047 aa12.21□□□□□ -0.45
TDP1-211ENST00000555178 CYP3A4P08684 503 aa12.21□□□□□ -0.45
TDP1-211ENST00000555178 PRKCZQ05513 592 aa12.21□□□□□ -0.45
TDP1-211ENST00000555178 CSPP1Q1MSJ5 1256 aa12.21□□□□□ -0.45
TDP1-211ENST00000555178 USP49Q70CQ1 688 aa12.21□□□□□ -0.45
TDP1-211ENST00000555178 MBOAT7Q96N66 472 aa12.21□□□□□ -0.45
TDP1-211ENST00000555178 PDGFCQ9NRA1 345 aa12.21□□□□□ -0.45
TDP1-211ENST00000555178 SLC15A5A6NIM6 579 aa12.21□□□□□ -0.46
TDP1-211ENST00000555178 PPP6R2O75170 966 aa12.21□□□□□ -0.46
TDP1-211ENST00000555178 EDNRBP24530 442 aa12.21□□□□□ -0.46
TDP1-211ENST00000555178 SP2Q02086 613 aa12.21□□□□□ -0.46
TDP1-211ENST00000555178 TRIM32Q13049 653 aa12.21□□□□□ -0.46
TDP1-211ENST00000555178 PCNX4Q63HM2 1172 aa12.21□□□□□ -0.46
TDP1-211ENST00000555178 SHC4Q6S5L8 630 aa12.21□□□□□ -0.46
TDP1-211ENST00000555178 DPP9Q86TI2 863 aa12.21□□□□□ -0.46
TDP1-211ENST00000555178 NSUN6Q8TEA1 469 aaKnown RBP12.21□□□□□ -0.46
TDP1-211ENST00000555178 MAML3Q96JK9 1138 aa12.21□□□□□ -0.46
TDP1-211ENST00000555178 MAP3K20Q9NYL2 800 aaKnown RBP12.21□□□□□ -0.46
TDP1-211ENST00000555178 DDX25Q9UHL0 483 aaKnown RBP12.21□□□□□ -0.46
TDP1-211ENST00000555178 UBIAD1Q9Y5Z9 338 aa12.21□□□□□ -0.46
TDP1-211ENST00000555178 IVNS1ABPQ9Y6Y0 642 aa12.21□□□□□ -0.46
TDP1-211ENST00000555178 CYP3A7-CYP3A51PA0A087WV96 503 aa12.2□□□□□ -0.46
TDP1-211ENST00000555178 A0A1B0GVL5 298 aa12.2□□□□□ -0.46
TDP1-211ENST00000555178 VWA3AA6NCI4 1184 aa12.2□□□□□ -0.46
TDP1-211ENST00000555178 MSH4O15457 936 aa12.2□□□□□ -0.46
TDP1-211ENST00000555178 STRNO43815 780 aa12.2□□□□□ -0.46
TDP1-211ENST00000555178 SNAI1O95863 264 aaPredicted RBP12.2□□□□□ -0.46
TDP1-211ENST00000555178 CYP3A7P24462 503 aa12.2□□□□□ -0.46
TDP1-211ENST00000555178 CDC25AP30304 524 aa12.2□□□□□ -0.46
TDP1-211ENST00000555178 CIITAP33076 1130 aa12.2□□□□□ -0.46
TDP1-211ENST00000555178 COPB2P35606 906 aa12.2□□□□□ -0.46
TDP1-211ENST00000555178 USP11P51784 963 aa12.2□□□□□ -0.46
TDP1-211ENST00000555178 MAP2K5Q13163 448 aa12.2□□□□□ -0.46
TDP1-211ENST00000555178 FBXO16Q8IX29 292 aaPredicted RBP12.2□□□□□ -0.46
TDP1-211ENST00000555178 KRI1Q8N9T8 703 aaKnown RBP12.2□□□□□ -0.46
TDP1-211ENST00000555178 MTMR9Q96QG7 549 aa12.2□□□□□ -0.46
TDP1-211ENST00000555178 CSRNP2Q9H175 543 aa12.2□□□□□ -0.46
TDP1-211ENST00000555178 CEP131Q9UPN4 1083 aa12.2□□□□□ -0.46
TDP1-211ENST00000555178 GOLGA6L4A6NEF3 574 aa12.19□□□□□ -0.46
TDP1-211ENST00000555178 PP2D1A8MPX8 630 aa12.19□□□□□ -0.46
TDP1-211ENST00000555178 MEIS1O00470 390 aa12.19□□□□□ -0.46
TDP1-211ENST00000555178 ADCY6O43306 1168 aa12.19□□□□□ -0.46
TDP1-211ENST00000555178 ARIH2O95376 493 aa12.19□□□□□ -0.46
TDP1-211ENST00000555178 CYP2C19P33261 490 aa12.19□□□□□ -0.46
TDP1-211ENST00000555178 FLT3LGP49771 235 aa12.19□□□□□ -0.46
TDP1-211ENST00000555178 GJC2Q5T442 439 aaPredicted RBP12.19□□□□□ -0.46
TDP1-211ENST00000555178 ABRAQ8N0Z2 381 aa12.19□□□□□ -0.46
TDP1-211ENST00000555178 FSIP1Q8NA03 581 aa12.19□□□□□ -0.46
TDP1-211ENST00000555178 ETNPPLQ8TBG4 499 aa12.19□□□□□ -0.46
TDP1-211ENST00000555178 MXRA8Q9BRK3 442 aa12.19□□□□□ -0.46
TDP1-211ENST00000555178 KATNBL1Q9H079 304 aa12.19□□□□□ -0.46
TDP1-211ENST00000555178 GZF1Q9H116 711 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms