RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 TMEM87BQ96K49 555 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 HOMER3Q9NSC5 361 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 TNRQ92752 1358 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 TSPOAP1O95153 1857 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 TTLL7Q6ZT98 887 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 PLA2G4DQ86XP0 818 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 C8orf58Q8NAV2 365 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 SELENONQ9NZV5 590 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 E9PMD0 336 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 LIG3P49916 1009 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 CCNA1P78396 465 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 DCAF4L1Q3SXM0 396 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 USP26Q9BXU7 913 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 MAP10Q9P2G4 905 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 NXF1Q9UBU9 619 aaKnown RBP7.45□□□□□ -1.22
SYNE2-216ENST00000555002 SYCE1LA8MT33 242 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 SNX2O60749 519 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 SLFN12Q8IYM2 578 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 RETREG2Q8NC44 543 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 GIPC2Q8TF65 315 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 CACTINQ8WUQ7 758 aaKnown RBP7.45□□□□□ -1.22
SYNE2-216ENST00000555002 AFG1LQ8WV93 481 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 CCND2P30279 289 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 TIMM10P62072 90 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 TFAP4Q01664 338 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 ZCWPW1Q9H0M4 648 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 NCKAP5LQ9HCH0 1330 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 MRPL50Q8N5N7 158 aaKnown RBP7.45□□□□□ -1.22
SYNE2-216ENST00000555002 SENP1Q9P0U3 644 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 NCOA1Q15788 1441 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 ZNF532Q9HCE3 1301 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 NFKBIAP25963 317 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 KPNA2P52292 529 aaKnown RBP7.45□□□□□ -1.22
SYNE2-216ENST00000555002 PSMC1P62191 440 aaKnown RBP7.45□□□□□ -1.22
SYNE2-216ENST00000555002 IMPG1Q17R60 797 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 KIAA0825Q8IV33 1275 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 MAP7D3Q8IWC1 876 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 TRIML1Q8N9V2 468 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 ENOX1Q8TC92 643 aaKnown RBP7.45□□□□□ -1.22
SYNE2-216ENST00000555002 TRIM15Q9C019 465 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 LRRC4Q9HBW1 653 aa7.45□□□□□ -1.22
SYNE2-216ENST00000555002 ARMCX3Q9UH62 379 aaPredicted RBP7.45□□□□□ -1.22
SYNE2-216ENST00000555002 PACSIN2Q9UNF0 486 aaPredicted RBP7.45□□□□□ -1.22
SYNE2-216ENST00000555002 PI4K2BG5E9Z4 385 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 XPOTO43592 962 aaKnown RBP7.44□□□□□ -1.22
SYNE2-216ENST00000555002 CCDC159P0C7I6 412 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 EHHADHQ08426 723 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 CERS3Q8IU89 383 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 NT5C3AQ9H0P0 336 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 CBX8Q9HC52 389 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 SLC39A2Q9NP94 309 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 MAN1A2O60476 641 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 CD58P19256 250 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 ARL4DP49703 201 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 IL9RQ01113 521 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 NBPF20Q3BBV1 942 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 NBPF10Q6P3W6 841 aaKnown RBP7.44□□□□□ -1.22
SYNE2-216ENST00000555002 CALN1Q9BXU9 219 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 ICA1Q05084 483 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 MIS18BP1Q6P0N0 1132 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 NDUFAF2Q8N183 169 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 HIPK4Q8NE63 616 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 TSC1Q92574 1164 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 PHACTR3Q96KR7 559 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 LARSQ9P2J5 1176 aaKnown RBP7.44□□□□□ -1.22
SYNE2-216ENST00000555002 ZNF233A6NK53 670 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 PRPSAP2O60256 369 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 DDIT3P35638 169 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 PMS1P54277 932 aaKnown RBP7.44□□□□□ -1.22
SYNE2-216ENST00000555002 AARS2Q5JTZ9 985 aaKnown RBP7.44□□□□□ -1.22
SYNE2-216ENST00000555002 STX18Q9P2W9 335 aaKnown RBP7.44□□□□□ -1.22
SYNE2-216ENST00000555002 MRC2Q9UBG0 1479 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 ABCC1P33527 1531 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 TMEM232C9JQI7 657 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 FMNL1O95466 1100 aaPredicted RBP7.44□□□□□ -1.22
SYNE2-216ENST00000555002 ARL4AP40617 200 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 CERKLQ49MI3 558 aaPredicted RBP7.44□□□□□ -1.22
SYNE2-216ENST00000555002 LINS1Q8NG48 757 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 TEKT3Q9BXF9 490 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 SMYD3Q9H7B4 428 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 HYOU1Q9Y4L1 999 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 SAR1BQ9Y6B6 198 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 NSD2O96028 1365 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 CLRN2A0PK11 232 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 SPDYE5A6NIY4 337 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 WASHC5Q12768 1159 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 SPDYE7PQ495Y7 208 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 TNNI3KQ59H18 835 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.44□□□□□ -1.22
SYNE2-216ENST00000555002 KIFC3Q9BVG8 833 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 FPGT-TNNI3KV9GXZ4 949 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 ANP32DO95626 131 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 MAPK4P31152 587 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 MYO1EQ12965 1108 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 PCGF5Q86SE9 256 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 EFCAB13Q8IY85 973 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 ANKRD44Q8N8A2 993 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 DNAJC7Q99615 494 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 GEMIN8Q9NWZ8 242 aaKnown RBP7.44□□□□□ -1.22
SYNE2-216ENST00000555002 USP21Q9UK80 565 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms