RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 SPZ1Q9BXG8 430 aa18.39■□□□□ 0.53
XRCC3-209ENST00000554913 EPHB4P54760 987 aa18.38■□□□□ 0.53
XRCC3-209ENST00000554913 LRRC41Q15345 812 aa18.38■□□□□ 0.53
XRCC3-209ENST00000554913 SLC10A5Q5PT55 438 aa18.38■□□□□ 0.53
XRCC3-209ENST00000554913 UNC13DQ70J99 1090 aa18.38■□□□□ 0.53
XRCC3-209ENST00000554913 TMC4Q7Z404 712 aa18.38■□□□□ 0.53
XRCC3-209ENST00000554913 CCDC84Q86UT8 332 aaPredicted RBP18.38■□□□□ 0.53
XRCC3-209ENST00000554913 MAPKAPK5Q8IW41 473 aa18.38■□□□□ 0.53
XRCC3-209ENST00000554913 ANKRD2Q9GZV1 360 aa18.38■□□□□ 0.53
XRCC3-209ENST00000554913 GRIN2DO15399 1336 aa18.38■□□□□ 0.53
XRCC3-209ENST00000554913 GNA11P29992 359 aa18.38■□□□□ 0.53
XRCC3-209ENST00000554913 GNGT1P63211 74 aa18.38■□□□□ 0.53
XRCC3-209ENST00000554913 ASTE1Q2TB18 679 aaPredicted RBP18.38■□□□□ 0.53
XRCC3-209ENST00000554913 TTMPQ5BVD1 217 aa18.38■□□□□ 0.53
XRCC3-209ENST00000554913 KLHDC7AQ5VTJ3 777 aa18.38■□□□□ 0.53
XRCC3-209ENST00000554913 SPTY2D1Q68D10 685 aaPredicted RBP18.38■□□□□ 0.53
XRCC3-209ENST00000554913 PIGSQ96S52 555 aa18.38■□□□□ 0.53
XRCC3-209ENST00000554913 LZTS2Q9BRK4 669 aa18.38■□□□□ 0.53
XRCC3-209ENST00000554913 GOLGA8KD6RF30 607 aa18.37■□□□□ 0.53
XRCC3-209ENST00000554913 PJA2O43164 708 aa18.37■□□□□ 0.53
XRCC3-209ENST00000554913 LDHBP07195 334 aaKnown RBP18.37■□□□□ 0.53
XRCC3-209ENST00000554913 PAFAH1B1P43034 410 aa18.37■□□□□ 0.53
XRCC3-209ENST00000554913 C8orf74Q6P047 294 aa18.37■□□□□ 0.53
XRCC3-209ENST00000554913 PDXDC1Q6P996 788 aa18.37■□□□□ 0.53
XRCC3-209ENST00000554913 LRRC55Q6ZSA7 311 aa18.37■□□□□ 0.53
XRCC3-209ENST00000554913 BCAS4Q8TDM0 211 aa18.37■□□□□ 0.53
XRCC3-209ENST00000554913 LARP4BQ92615 738 aaKnown RBP18.37■□□□□ 0.53
XRCC3-209ENST00000554913 RUBCNQ92622 972 aa18.37■□□□□ 0.53
XRCC3-209ENST00000554913 NUDT12Q9BQG2 462 aa18.37■□□□□ 0.53
XRCC3-209ENST00000554913 THRAP3Q9Y2W1 955 aaKnown RBP18.37■□□□□ 0.53
XRCC3-209ENST00000554913 ROBO3Q96MS0 1386 aa18.37■□□□□ 0.53
XRCC3-209ENST00000554913 UBAP1LF5GYI3 381 aa18.37■□□□□ 0.53
XRCC3-209ENST00000554913 NAP1L1P55209 391 aaKnown RBP18.37■□□□□ 0.53
XRCC3-209ENST00000554913 SOGA3Q5TF21 947 aa18.37■□□□□ 0.53
XRCC3-209ENST00000554913 EMBQ6PCB8 327 aa18.37■□□□□ 0.53
XRCC3-209ENST00000554913 CACNA2D4Q7Z3S7 1137 aa18.37■□□□□ 0.53
XRCC3-209ENST00000554913 EFCAB13Q8IY85 973 aa18.37■□□□□ 0.53
XRCC3-209ENST00000554913 GUF1Q8N442 669 aaKnown RBP18.37■□□□□ 0.53
XRCC3-209ENST00000554913 LINC00116Q8NCU8 138 aa18.37■□□□□ 0.53
XRCC3-209ENST00000554913 NLRP3Q96P20 1036 aa18.37■□□□□ 0.53
XRCC3-209ENST00000554913 NLRC4Q9NPP4 1024 aa18.37■□□□□ 0.53
XRCC3-209ENST00000554913 PVALEFA0A1B0GWK0 134 aa18.36■□□□□ 0.53
XRCC3-209ENST00000554913 POTEMA6NI47 508 aa18.36■□□□□ 0.53
XRCC3-209ENST00000554913 EIF3HO15372 352 aaKnown RBP eCLIP18.36■□□□□ 0.536e-6■■■■□ 25.8
XRCC3-209ENST00000554913 OPA1O60313 960 aa18.36■□□□□ 0.53
XRCC3-209ENST00000554913 DNA2P51530 1060 aa18.36■□□□□ 0.53
XRCC3-209ENST00000554913 KCNMA1Q12791 1236 aa18.36■□□□□ 0.53
XRCC3-209ENST00000554913 HGSNATQ68CP4 663 aa18.36■□□□□ 0.53
XRCC3-209ENST00000554913 MTMR9Q96QG7 549 aa18.36■□□□□ 0.53
XRCC3-209ENST00000554913 TANGO6Q9C0B7 1094 aa18.36■□□□□ 0.53
XRCC3-209ENST00000554913 UBA5Q9GZZ9 404 aa18.36■□□□□ 0.53
XRCC3-209ENST00000554913 CCDC88AQ3V6T2 1871 aa18.36■□□□□ 0.53
XRCC3-209ENST00000554913 ZPR1O75312 459 aa18.35■□□□□ 0.53
XRCC3-209ENST00000554913 TDRD12Q587J7 1177 aaKnown RBP18.35■□□□□ 0.53
XRCC3-209ENST00000554913 KCNK18Q7Z418 384 aa18.35■□□□□ 0.53
XRCC3-209ENST00000554913 REXO1Q8N1G1 1221 aaKnown RBP18.35■□□□□ 0.53
XRCC3-209ENST00000554913 NOX5Q96PH1 765 aa18.35■□□□□ 0.53
XRCC3-209ENST00000554913 ZSCAN5CA6NGD5 496 aaPredicted RBP18.35■□□□□ 0.53
XRCC3-209ENST00000554913 SLC37A4O43826 429 aa18.35■□□□□ 0.53
XRCC3-209ENST00000554913 GLI1P08151 1106 aa18.35■□□□□ 0.53
XRCC3-209ENST00000554913 CALCRLQ16602 461 aa18.35■□□□□ 0.53
XRCC3-209ENST00000554913 FAM98CQ17RN3 349 aaKnown RBP18.35■□□□□ 0.53
XRCC3-209ENST00000554913 TADA2BQ86TJ2 420 aa18.35■□□□□ 0.53
XRCC3-209ENST00000554913 CAVIN3Q969G5 261 aa18.35■□□□□ 0.53
XRCC3-209ENST00000554913 CDK5RAP3Q96JB5 506 aa18.35■□□□□ 0.53
XRCC3-209ENST00000554913 ZIM3Q96PE6 472 aa18.35■□□□□ 0.53
XRCC3-209ENST00000554913 STK17AQ9UEE5 414 aa18.35■□□□□ 0.53
XRCC3-209ENST00000554913 SEC63Q9UGP8 760 aaKnown RBP18.35■□□□□ 0.53
XRCC3-209ENST00000554913 IRS2Q9Y4H2 1338 aa18.35■□□□□ 0.53
XRCC3-209ENST00000554913 ESYT3A0FGR9 886 aa18.34■□□□□ 0.53
XRCC3-209ENST00000554913 EBAG9O00559 213 aa18.34■□□□□ 0.53
XRCC3-209ENST00000554913 HSF2BPO75031 334 aa18.34■□□□□ 0.53
XRCC3-209ENST00000554913 TDP2O95551 362 aa18.34■□□□□ 0.53
XRCC3-209ENST00000554913 FGFR1OPO95684 399 aaKnown RBP18.34■□□□□ 0.53
XRCC3-209ENST00000554913 LRRC63Q05C16 580 aa18.34■□□□□ 0.53
XRCC3-209ENST00000554913 ALS2CLQ60I27 953 aa18.34■□□□□ 0.53
XRCC3-209ENST00000554913 PTF1AQ7RTS3 328 aa18.34■□□□□ 0.53
XRCC3-209ENST00000554913 SH2D3CQ8N5H7 860 aa18.34■□□□□ 0.53
XRCC3-209ENST00000554913 C8orf37Q96NL8 207 aa18.34■□□□□ 0.53
XRCC3-209ENST00000554913 EYA3Q99504 573 aa18.34■□□□□ 0.53
XRCC3-209ENST00000554913 CDCA7Q9BWT1 371 aaPredicted RBP18.34■□□□□ 0.53
XRCC3-209ENST00000554913 A0A087WUV0 522 aaPredicted RBP18.34■□□□□ 0.53
XRCC3-209ENST00000554913 EDIL3O43854 480 aa18.34■□□□□ 0.53
XRCC3-209ENST00000554913 FAM153BP0C7A2 387 aa18.34■□□□□ 0.53
XRCC3-209ENST00000554913 EPB41P11171 864 aaKnown RBP18.34■□□□□ 0.53
XRCC3-209ENST00000554913 CARSP49589 748 aaKnown RBP18.34■□□□□ 0.53
XRCC3-209ENST00000554913 FAM153CQ494X1 144 aa18.34■□□□□ 0.53
XRCC3-209ENST00000554913 GBP6Q6ZN66 633 aa18.34■□□□□ 0.53
XRCC3-209ENST00000554913 DDX12PQ92771 950 aa18.34■□□□□ 0.53
XRCC3-209ENST00000554913 RUFY1Q96T51 708 aa18.34■□□□□ 0.53
XRCC3-209ENST00000554913 POLD4Q9HCU8 107 aa18.34■□□□□ 0.53
XRCC3-209ENST00000554913 FAM153AQ9UHL3 310 aa18.34■□□□□ 0.53
XRCC3-209ENST00000554913 FAM169AQ9Y6X4 670 aa18.34■□□□□ 0.53
XRCC3-209ENST00000554913 ABCB11O95342 1321 aa18.34■□□□□ 0.53
XRCC3-209ENST00000554913 TLR2O60603 784 aa18.33■□□□□ 0.53
XRCC3-209ENST00000554913 KRT14P02533 472 aa18.33■□□□□ 0.53
XRCC3-209ENST00000554913 CDK8P49336 464 aa18.33■□□□□ 0.53
XRCC3-209ENST00000554913 NT5C2P49902 561 aa18.33■□□□□ 0.53
XRCC3-209ENST00000554913 APBA1Q02410 837 aa18.33■□□□□ 0.53
XRCC3-209ENST00000554913 KCTD16Q68DU8 428 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms