RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 SMC1AQ14683 1233 aaKnown RBP18.4■□□□□ 0.54
PCNX1-209ENST00000554879 ANKS1AQ92625 1134 aa18.4■□□□□ 0.54
PCNX1-209ENST00000554879 RAVER2Q9HCJ3 691 aaKnown RBP18.4■□□□□ 0.54
PCNX1-209ENST00000554879 GGA3Q9NZ52 723 aa18.4■□□□□ 0.54
PCNX1-209ENST00000554879 KIAA0754O94854 1291 aa18.4■□□□□ 0.54
PCNX1-209ENST00000554879 FOSP01100 380 aaPredicted RBP18.4■□□□□ 0.54
PCNX1-209ENST00000554879 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.4■□□□□ 0.54
PCNX1-209ENST00000554879 SLC24A3Q9HC58 644 aa18.4■□□□□ 0.54
PCNX1-209ENST00000554879 NHSQ6T4R5 1651 aa18.4■□□□□ 0.54
PCNX1-209ENST00000554879 TRAF5O00463 557 aa18.39■□□□□ 0.54
PCNX1-209ENST00000554879 PABPC4Q13310 644 aaKnown RBP eCLIP18.39■□□□□ 0.54
PCNX1-209ENST00000554879 CNNM4Q6P4Q7 775 aa18.39■□□□□ 0.54
PCNX1-209ENST00000554879 GPBP1Q86WP2 473 aa18.39■□□□□ 0.54
PCNX1-209ENST00000554879 SYCP3Q8IZU3 236 aa18.39■□□□□ 0.54
PCNX1-209ENST00000554879 TRIML1Q8N9V2 468 aa18.39■□□□□ 0.54
PCNX1-209ENST00000554879 AKAP11Q9UKA4 1901 aa18.39■□□□□ 0.54
PCNX1-209ENST00000554879 ARHGAP4P98171 946 aa18.39■□□□□ 0.53
PCNX1-209ENST00000554879 ARID5BQ14865 1188 aa18.39■□□□□ 0.53
PCNX1-209ENST00000554879 GADL1Q6ZQY3 521 aa18.39■□□□□ 0.53
PCNX1-209ENST00000554879 CEP57Q86XR8 500 aa18.39■□□□□ 0.53
PCNX1-209ENST00000554879 CCDC65Q8IXS2 484 aa18.39■□□□□ 0.53
PCNX1-209ENST00000554879 VIL1P09327 827 aaKnown RBP18.39■□□□□ 0.53
PCNX1-209ENST00000554879 CYP2C19P33261 490 aa18.39■□□□□ 0.53
PCNX1-209ENST00000554879 CACNA2D4Q7Z3S7 1137 aa18.39■□□□□ 0.53
PCNX1-209ENST00000554879 LARP4BQ92615 738 aaKnown RBP18.39■□□□□ 0.53
PCNX1-209ENST00000554879 RIC8AQ9NPQ8 531 aa18.39■□□□□ 0.53
PCNX1-209ENST00000554879 FAM13AO94988 1023 aa18.39■□□□□ 0.53
PCNX1-209ENST00000554879 FGFR1OPO95684 399 aaKnown RBP18.39■□□□□ 0.53
PCNX1-209ENST00000554879 GRM1Q13255 1194 aa18.39■□□□□ 0.53
PCNX1-209ENST00000554879 TMEM132AQ24JP5 1023 aa18.39■□□□□ 0.53
PCNX1-209ENST00000554879 AK8Q96MA6 479 aa18.39■□□□□ 0.53
PCNX1-209ENST00000554879 FUCA2Q9BTY2 467 aa18.39■□□□□ 0.53
PCNX1-209ENST00000554879 MYH13Q9UKX3 1938 aa18.39■□□□□ 0.53
PCNX1-209ENST00000554879 LRRC41Q15345 812 aa18.38■□□□□ 0.53
PCNX1-209ENST00000554879 CDAN1Q8IWY9 1227 aa18.38■□□□□ 0.53
PCNX1-209ENST00000554879 SUFUQ9UMX1 484 aa18.38■□□□□ 0.53
PCNX1-209ENST00000554879 STAT3P40763 770 aa18.38■□□□□ 0.53
PCNX1-209ENST00000554879 CDR1P51861 262 aa18.38■□□□□ 0.53
PCNX1-209ENST00000554879 MTMR2Q13614 643 aa18.38■□□□□ 0.53
PCNX1-209ENST00000554879 IGSF22Q8N9C0 903 aa18.38■□□□□ 0.53
PCNX1-209ENST00000554879 SUPT20HL1Q3ZLR7 823 aa18.38■□□□□ 0.53
PCNX1-209ENST00000554879 CXorf56Q9H5V9 222 aa18.38■□□□□ 0.53
PCNX1-209ENST00000554879 EIF2AK2P19525 551 aaKnown RBP18.37■□□□□ 0.53
PCNX1-209ENST00000554879 IQCB1Q15051 598 aa18.37■□□□□ 0.53
PCNX1-209ENST00000554879 FAM114A1Q8IWE2 563 aa18.37■□□□□ 0.53
PCNX1-209ENST00000554879 DHX40Q8IX18 779 aaKnown RBP18.37■□□□□ 0.53
PCNX1-209ENST00000554879 RIOX1Q9H6W3 641 aa18.37■□□□□ 0.53
PCNX1-209ENST00000554879 BICDL2A1A5D9 508 aa18.37■□□□□ 0.53
PCNX1-209ENST00000554879 FRMD3A2A2Y4 597 aa18.37■□□□□ 0.53
PCNX1-209ENST00000554879 ADKP55263 362 aaKnown RBP18.37■□□□□ 0.53
PCNX1-209ENST00000554879 GABPAQ06546 454 aa18.37■□□□□ 0.53
PCNX1-209ENST00000554879 SPDYE2Q495Y8 402 aa18.37■□□□□ 0.53
PCNX1-209ENST00000554879 DNAJC21Q5F1R6 531 aaKnown RBP18.37■□□□□ 0.53
PCNX1-209ENST00000554879 ZKSCAN4Q969J2 545 aaPredicted RBP18.37■□□□□ 0.53
PCNX1-209ENST00000554879 GCFC2P16383 781 aaKnown RBP18.37■□□□□ 0.53
PCNX1-209ENST00000554879 LIG3P49916 1009 aa18.37■□□□□ 0.53
PCNX1-209ENST00000554879 NBPF12Q5TAG4 269 aaPredicted RBP18.37■□□□□ 0.53
PCNX1-209ENST00000554879 MRFAP1L1Q96HT8 127 aa18.37■□□□□ 0.53
PCNX1-209ENST00000554879 BACH1O14867 736 aa18.37■□□□□ 0.53
PCNX1-209ENST00000554879 INPP5BP32019 993 aa18.37■□□□□ 0.53
PCNX1-209ENST00000554879 HMGCS2P54868 508 aa18.37■□□□□ 0.53
PCNX1-209ENST00000554879 MORC3Q14149 939 aa18.37■□□□□ 0.53
PCNX1-209ENST00000554879 SH3BP5LQ7L8J4 393 aa18.37■□□□□ 0.53
PCNX1-209ENST00000554879 NT5C3AQ9H0P0 336 aa18.37■□□□□ 0.53
PCNX1-209ENST00000554879 SPTLC3Q9NUV7 552 aa18.37■□□□□ 0.53
PCNX1-209ENST00000554879 DCAF8L1A6NGE4 600 aa18.36■□□□□ 0.53
PCNX1-209ENST00000554879 FAM160B2Q86V87 743 aa18.36■□□□□ 0.53
PCNX1-209ENST00000554879 SLFN12Q8IYM2 578 aa18.36■□□□□ 0.53
PCNX1-209ENST00000554879 VCPKMTQ9H867 229 aa18.36■□□□□ 0.53
PCNX1-209ENST00000554879 ARHGEF16Q5VV41 709 aa18.36■□□□□ 0.53
PCNX1-209ENST00000554879 SPATA1Q5VX52 437 aa18.36■□□□□ 0.53
PCNX1-209ENST00000554879 CACTINQ8WUQ7 758 aaKnown RBP18.36■□□□□ 0.53
PCNX1-209ENST00000554879 MYO5AQ9Y4I1 1855 aaKnown RBP18.36■□□□□ 0.53
PCNX1-209ENST00000554879 CAP2P40123 477 aa18.36■□□□□ 0.53
PCNX1-209ENST00000554879 SSR1P43307 286 aaKnown RBP18.36■□□□□ 0.53
PCNX1-209ENST00000554879 HPSEQ9Y251 543 aa18.36■□□□□ 0.53
PCNX1-209ENST00000554879 CICQ96RK0 1608 aaPredicted RBP18.36■□□□□ 0.53
PCNX1-209ENST00000554879 CCP110O43303 1012 aa18.35■□□□□ 0.53
PCNX1-209ENST00000554879 CLCN6P51797 869 aa18.35■□□□□ 0.53
PCNX1-209ENST00000554879 NLGN2Q8NFZ4 835 aa18.35■□□□□ 0.53
PCNX1-209ENST00000554879 SLC20A2Q08357 652 aa18.35■□□□□ 0.53
PCNX1-209ENST00000554879 LDHDQ86WU2 507 aa18.35■□□□□ 0.53
PCNX1-209ENST00000554879 CARD6Q9BX69 1037 aa18.35■□□□□ 0.53
PCNX1-209ENST00000554879 RNF216Q9NWF9 866 aaPredicted RBP18.35■□□□□ 0.53
PCNX1-209ENST00000554879 EP400Q96L91 3159 aa18.35■□□□□ 0.53
PCNX1-209ENST00000554879 IKBKBO14920 756 aa18.35■□□□□ 0.53
PCNX1-209ENST00000554879 ADAMTS3O15072 1205 aa18.35■□□□□ 0.53
PCNX1-209ENST00000554879 SLC37A4O43826 429 aa18.35■□□□□ 0.53
PCNX1-209ENST00000554879 FKBP1AP62942 108 aaKnown RBP18.35■□□□□ 0.53
PCNX1-209ENST00000554879 TBC1D8BQ0IIM8 1120 aa18.35■□□□□ 0.53
PCNX1-209ENST00000554879 SLF1Q9BQI6 1058 aa18.35■□□□□ 0.53
PCNX1-209ENST00000554879 ACTN4O43707 911 aaKnown RBP18.35■□□□□ 0.53
PCNX1-209ENST00000554879 PNMA6AP0CW24 399 aaPredicted RBP18.35■□□□□ 0.53
PCNX1-209ENST00000554879 MATR3P43243 847 aaKnown RBP eCLIP18.35■□□□□ 0.532e-10■■■□□ 18.4
PCNX1-209ENST00000554879 NOC4LQ9BVI4 516 aaKnown RBP18.35■□□□□ 0.53
PCNX1-209ENST00000554879 MKRN3Q13064 507 aaKnown RBP18.34■□□□□ 0.53
PCNX1-209ENST00000554879 HPS3Q969F9 1004 aa18.34■□□□□ 0.53
PCNX1-209ENST00000554879 ZNF577Q9BSK1 485 aa18.34■□□□□ 0.53
PCNX1-209ENST00000554879 DNAJC18Q9H819 358 aa18.34■□□□□ 0.53
PCNX1-209ENST00000554879 IRS2Q9Y4H2 1338 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms