RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 M0R2N6 131 aa10.53□□□□□ -0.72
SYNE2-213ENST00000554805 PPFIA4O75335 1185 aa10.53□□□□□ -0.72
SYNE2-213ENST00000554805 ADCY7P51828 1080 aa10.53□□□□□ -0.72
SYNE2-213ENST00000554805 UNC13DQ70J99 1090 aa10.53□□□□□ -0.72
SYNE2-213ENST00000554805 ZNF804AQ7Z570 1209 aa10.53□□□□□ -0.72
SYNE2-213ENST00000554805 LRRC47Q8N1G4 583 aaKnown RBP10.53□□□□□ -0.72
SYNE2-213ENST00000554805 KANSL2Q9H9L4 492 aa10.53□□□□□ -0.72
SYNE2-213ENST00000554805 FLT1P17948 1338 aa10.52□□□□□ -0.72
SYNE2-213ENST00000554805 OPA1O60313 960 aa10.52□□□□□ -0.72
SYNE2-213ENST00000554805 CCT5P48643 541 aa10.52□□□□□ -0.72
SYNE2-213ENST00000554805 RAPGEF1Q13905 1077 aa10.52□□□□□ -0.72
SYNE2-213ENST00000554805 CEP95Q96GE4 821 aa10.52□□□□□ -0.72
SYNE2-213ENST00000554805 LUC7LQ9NQ29 371 aaKnown RBP10.52□□□□□ -0.72
SYNE2-213ENST00000554805 PLAGL2Q9UPG8 496 aa10.52□□□□□ -0.72
SYNE2-213ENST00000554805 LRP5O75197 1615 aa10.52□□□□□ -0.73
SYNE2-213ENST00000554805 SHANK3Q9BYB0 1731 aa10.52□□□□□ -0.73
SYNE2-213ENST00000554805 TRIM37O94972 964 aa10.52□□□□□ -0.73
SYNE2-213ENST00000554805 AARSP49588 968 aaKnown RBP eCLIP10.52□□□□□ -0.73
SYNE2-213ENST00000554805 GNGT1P63211 74 aa10.52□□□□□ -0.73
SYNE2-213ENST00000554805 CACNB1Q02641 598 aaPredicted RBP10.52□□□□□ -0.73
SYNE2-213ENST00000554805 PPARDQ03181 441 aa10.52□□□□□ -0.73
SYNE2-213ENST00000554805 GRB10Q13322 594 aa10.52□□□□□ -0.73
SYNE2-213ENST00000554805 CREG2Q8IUH2 290 aa10.52□□□□□ -0.73
SYNE2-213ENST00000554805 DDX12PQ92771 950 aa10.52□□□□□ -0.73
SYNE2-213ENST00000554805 GJA10Q969M2 543 aa10.52□□□□□ -0.73
SYNE2-213ENST00000554805 MS4A14Q96JA4 679 aa10.52□□□□□ -0.73
SYNE2-213ENST00000554805 LSM14BQ9BX40 385 aaKnown RBP10.52□□□□□ -0.73
SYNE2-213ENST00000554805 CENPHQ9H3R5 247 aa10.52□□□□□ -0.73
SYNE2-213ENST00000554805 CCNL1Q9UK58 526 aaPredicted RBP10.52□□□□□ -0.73
SYNE2-213ENST00000554805 SHTN1A0MZ66 631 aa10.52□□□□□ -0.73
SYNE2-213ENST00000554805 FTCDO95954 541 aa10.52□□□□□ -0.73
SYNE2-213ENST00000554805 SLC1A4P43007 532 aa10.52□□□□□ -0.73
SYNE2-213ENST00000554805 POLR2FP61218 127 aaKnown RBP10.52□□□□□ -0.73
SYNE2-213ENST00000554805 SLC10A5Q5PT55 438 aa10.52□□□□□ -0.73
SYNE2-213ENST00000554805 CENPPQ6IPU0 288 aa10.52□□□□□ -0.73
SYNE2-213ENST00000554805 MYOCDQ8IZQ8 938 aa10.52□□□□□ -0.73
SYNE2-213ENST00000554805 ANKS1AQ92625 1134 aa10.52□□□□□ -0.73
SYNE2-213ENST00000554805 MMTAG2Q9BU76 263 aaKnown RBP10.52□□□□□ -0.73
SYNE2-213ENST00000554805 SPZ1Q9BXG8 430 aa10.52□□□□□ -0.73
SYNE2-213ENST00000554805 ITGB4P16144 1822 aa10.51□□□□□ -0.73
SYNE2-213ENST00000554805 ROBO1Q9Y6N7 1651 aa10.51□□□□□ -0.73
SYNE2-213ENST00000554805 A0A1W2PQJ5 194 aa10.51□□□□□ -0.73
SYNE2-213ENST00000554805 F8W031 263 aaPredicted RBP10.51□□□□□ -0.73
SYNE2-213ENST00000554805 TULP1O00294 542 aaPredicted RBP10.51□□□□□ -0.73
SYNE2-213ENST00000554805 UBE2SQ16763 222 aa10.51□□□□□ -0.73
SYNE2-213ENST00000554805 PTPROQ16827 1216 aa10.51□□□□□ -0.73
SYNE2-213ENST00000554805 TTC31Q49AM3 519 aaPredicted RBP10.51□□□□□ -0.73
SYNE2-213ENST00000554805 SLC9C1Q4G0N8 1177 aa10.51□□□□□ -0.73
SYNE2-213ENST00000554805 SFMBT2Q5VUG0 894 aa10.51□□□□□ -0.73
SYNE2-213ENST00000554805 KCTD16Q68DU8 428 aa10.51□□□□□ -0.73
SYNE2-213ENST00000554805 MICALL1Q8N3F8 863 aa10.51□□□□□ -0.73
SYNE2-213ENST00000554805 GLIS3Q8NEA6 775 aa10.51□□□□□ -0.73
SYNE2-213ENST00000554805 IQCDQ96DY2 449 aa10.51□□□□□ -0.73
SYNE2-213ENST00000554805 CAPS2Q9BXY5 557 aa10.51□□□□□ -0.73
SYNE2-213ENST00000554805 EBAG9O00559 213 aa10.51□□□□□ -0.73
SYNE2-213ENST00000554805 ZEB2O60315 1214 aa10.51□□□□□ -0.73
SYNE2-213ENST00000554805 GUCY2FP51841 1108 aa10.51□□□□□ -0.73
SYNE2-213ENST00000554805 SEMA3FQ13275 785 aa10.51□□□□□ -0.73
SYNE2-213ENST00000554805 FIGNQ5HY92 759 aa10.51□□□□□ -0.73
SYNE2-213ENST00000554805 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.51□□□□□ -0.73
SYNE2-213ENST00000554805 SEPT12Q8IYM1 358 aa10.51□□□□□ -0.73
SYNE2-213ENST00000554805 MMGT1Q8N4V1 131 aa10.51□□□□□ -0.73
SYNE2-213ENST00000554805 TAF4BQ92750 862 aa10.51□□□□□ -0.73
SYNE2-213ENST00000554805 STK17AQ9UEE5 414 aa10.51□□□□□ -0.73
SYNE2-213ENST00000554805 BCL9LQ86UU0 1499 aa10.51□□□□□ -0.73
SYNE2-213ENST00000554805 ESYT3A0FGR9 886 aa10.5□□□□□ -0.73
SYNE2-213ENST00000554805 SLC37A4O43826 429 aa10.5□□□□□ -0.73
SYNE2-213ENST00000554805 UFL1O94874 794 aa10.5□□□□□ -0.73
SYNE2-213ENST00000554805 PRPF6O94906 941 aaKnown RBP10.5□□□□□ -0.73
SYNE2-213ENST00000554805 ATP1A2P50993 1020 aa10.5□□□□□ -0.73
SYNE2-213ENST00000554805 NFIXQ14938 502 aa10.5□□□□□ -0.73
SYNE2-213ENST00000554805 CFAP221Q4G0U5 840 aa10.5□□□□□ -0.73
SYNE2-213ENST00000554805 PDXDC1Q6P996 788 aa10.5□□□□□ -0.73
SYNE2-213ENST00000554805 ZNF662Q6ZS27 426 aa10.5□□□□□ -0.73
SYNE2-213ENST00000554805 CLEC10AQ8IUN9 316 aa10.5□□□□□ -0.73
SYNE2-213ENST00000554805 ZSCAN29Q8IWY8 852 aaPredicted RBP10.5□□□□□ -0.73
SYNE2-213ENST00000554805 GUF1Q8N442 669 aaKnown RBP10.5□□□□□ -0.73
SYNE2-213ENST00000554805 NEDD1Q8NHV4 660 aa10.5□□□□□ -0.73
SYNE2-213ENST00000554805 BCAS4Q8TDM0 211 aa10.5□□□□□ -0.73
SYNE2-213ENST00000554805 NUDT12Q9BQG2 462 aa10.5□□□□□ -0.73
SYNE2-213ENST00000554805 LRRC27Q9C0I9 530 aa10.5□□□□□ -0.73
SYNE2-213ENST00000554805 POLD4Q9HCU8 107 aa10.5□□□□□ -0.73
SYNE2-213ENST00000554805 BLOC1S4Q9NUP1 217 aa10.5□□□□□ -0.73
SYNE2-213ENST00000554805 STIM2Q9P246 746 aa10.5□□□□□ -0.73
SYNE2-213ENST00000554805 SIK3Q9Y2K2 1263 aa10.5□□□□□ -0.73
SYNE2-213ENST00000554805 DOCK2Q92608 1830 aa10.5□□□□□ -0.73
SYNE2-213ENST00000554805 SPATA31A5Q5VU36 1347 aa10.5□□□□□ -0.73
SYNE2-213ENST00000554805 SPATA31A7Q8IWB4 1347 aa10.5□□□□□ -0.73
SYNE2-213ENST00000554805 ANKRD36CQ5JPF3 1778 aa10.5□□□□□ -0.73
SYNE2-213ENST00000554805 PVALEFA0A1B0GWK0 134 aa10.5□□□□□ -0.73
SYNE2-213ENST00000554805 MPHOSPH10O00566 681 aaKnown RBP10.5□□□□□ -0.73
SYNE2-213ENST00000554805 NOP2P46087 812 aaKnown RBP10.5□□□□□ -0.73
SYNE2-213ENST00000554805 CDK17Q00537 523 aa10.5□□□□□ -0.73
SYNE2-213ENST00000554805 GUCY2DQ02846 1103 aa10.5□□□□□ -0.73
SYNE2-213ENST00000554805 PPFIA1Q13136 1202 aa10.5□□□□□ -0.73
SYNE2-213ENST00000554805 HERC4Q5GLZ8 1057 aaPredicted RBP10.5□□□□□ -0.73
SYNE2-213ENST00000554805 CFAP58Q5T655 872 aa10.5□□□□□ -0.73
SYNE2-213ENST00000554805 RAD54LQ92698 747 aa10.5□□□□□ -0.73
SYNE2-213ENST00000554805 PNMA5Q96PV4 448 aa10.5□□□□□ -0.73
SYNE2-213ENST00000554805 EHD4Q9H223 541 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms