RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 NEDD4P46934 1319 aa28.29■■■□□ 2.12
FOXA1-204ENST00000554607 KCNQ1P51787 676 aa28.29■■■□□ 2.12
FOXA1-204ENST00000554607 ASPRV1Q53RT3 343 aa28.29■■■□□ 2.12
FOXA1-204ENST00000554607 LRRC8DQ7L1W4 858 aa28.29■■■□□ 2.12
FOXA1-204ENST00000554607 CHST3Q7LGC8 479 aa28.29■■■□□ 2.12
FOXA1-204ENST00000554607 ADGRF4Q8IZF3 695 aa28.29■■■□□ 2.12
FOXA1-204ENST00000554607 TET1Q8NFU7 2136 aa28.29■■■□□ 2.12
FOXA1-204ENST00000554607 TRIP12Q14669 1992 aaPredicted RBP28.29■■■□□ 2.12
FOXA1-204ENST00000554607 KAT2BQ92831 832 aa28.28■■■□□ 2.12
FOXA1-204ENST00000554607 ZBED2Q9BTP6 218 aa28.28■■■□□ 2.12
FOXA1-204ENST00000554607 KATNAL1Q9BW62 490 aa28.28■■■□□ 2.12
FOXA1-204ENST00000554607 EIF3JO75822 258 aaKnown RBP28.27■■■□□ 2.12
FOXA1-204ENST00000554607 ARHGEF15O94989 841 aa28.27■■■□□ 2.12
FOXA1-204ENST00000554607 SDSP20132 328 aa28.27■■■□□ 2.12
FOXA1-204ENST00000554607 WDR5P61964 334 aaKnown RBP28.27■■■□□ 2.12
FOXA1-204ENST00000554607 RBL2Q08999 1139 aa28.27■■■□□ 2.12
FOXA1-204ENST00000554607 GRB10Q13322 594 aa28.27■■■□□ 2.12
FOXA1-204ENST00000554607 ARHGEF16Q5VV41 709 aa28.27■■■□□ 2.12
FOXA1-204ENST00000554607 CNKSR3Q6P9H4 555 aa28.27■■■□□ 2.12
FOXA1-204ENST00000554607 FBXO11Q86XK2 927 aa28.27■■■□□ 2.12
FOXA1-204ENST00000554607 C7orf31Q8N865 590 aa28.27■■■□□ 2.12
FOXA1-204ENST00000554607 HLA-CQ95604 372 aa28.27■■■□□ 2.12
FOXA1-204ENST00000554607 EMID1Q96A84 441 aaPredicted RBP28.27■■■□□ 2.12
FOXA1-204ENST00000554607 CTAGE1Q96RT6 745 aa28.27■■■□□ 2.12
FOXA1-204ENST00000554607 CRBNQ96SW2 442 aa28.27■■■□□ 2.12
FOXA1-204ENST00000554607 COL20A1Q9P218 1284 aa28.27■■■□□ 2.12
FOXA1-204ENST00000554607 GTF2IRD1Q9UHL9 959 aa28.27■■■□□ 2.12
FOXA1-204ENST00000554607 DHX16O60231 1041 aaKnown RBP28.26■■■□□ 2.11
FOXA1-204ENST00000554607 KDM4AO75164 1064 aa28.26■■■□□ 2.11
FOXA1-204ENST00000554607 KRT40Q6A162 431 aa28.26■■■□□ 2.11
FOXA1-204ENST00000554607 LNPKQ9C0E8 428 aa28.26■■■□□ 2.11
FOXA1-204ENST00000554607 LMCD1Q9NZU5 365 aa28.26■■■□□ 2.11
FOXA1-204ENST00000554607 DDX41Q9UJV9 622 aaKnown RBP28.26■■■□□ 2.11
FOXA1-204ENST00000554607 ABHD14A-ACY1A0A1B0GW23 586 aa28.25■■■□□ 2.11
FOXA1-204ENST00000554607 CXCL10P02778 98 aa28.25■■■□□ 2.11
FOXA1-204ENST00000554607 PARP1P09874 1014 aaKnown RBP28.25■■■□□ 2.11
FOXA1-204ENST00000554607 LAMC2Q13753 1193 aa28.25■■■□□ 2.11
FOXA1-204ENST00000554607 GPNMBQ14956 572 aa28.25■■■□□ 2.11
FOXA1-204ENST00000554607 QRICH1Q2TAL8 776 aa28.25■■■□□ 2.11
FOXA1-204ENST00000554607 DHX38Q92620 1227 aaKnown RBP28.25■■■□□ 2.11
FOXA1-204ENST00000554607 ZSCAN10Q96SZ4 725 aaPredicted RBP28.25■■■□□ 2.11
FOXA1-204ENST00000554607 RAPGEFL1Q9UHV5 662 aa28.25■■■□□ 2.11
FOXA1-204ENST00000554607 EFCAB14O75071 495 aa28.24■■■□□ 2.11
FOXA1-204ENST00000554607 CKBP12277 381 aa28.24■■■□□ 2.11
FOXA1-204ENST00000554607 PSEN2P49810 448 aa28.24■■■□□ 2.11
FOXA1-204ENST00000554607 HDAC6Q9UBN7 1215 aa28.24■■■□□ 2.11
FOXA1-204ENST00000554607 MRVI1Q9Y6F6 885 aa28.24■■■□□ 2.11
FOXA1-204ENST00000554607 KIAA1217Q5T5P2 1943 aa28.24■■■□□ 2.11
FOXA1-204ENST00000554607 NR3C2P08235 984 aa28.23■■■□□ 2.11
FOXA1-204ENST00000554607 EIF2AK2P19525 551 aaKnown RBP28.23■■■□□ 2.11
FOXA1-204ENST00000554607 PTK7Q13308 1070 aa28.23■■■□□ 2.11
FOXA1-204ENST00000554607 PPTC7Q8NI37 304 aa28.23■■■□□ 2.11
FOXA1-204ENST00000554607 RAD9AQ99638 391 aa28.23■■■□□ 2.11
FOXA1-204ENST00000554607 ALG1Q9BT22 464 aa28.23■■■□□ 2.11
FOXA1-204ENST00000554607 VAT1LQ9HCJ6 419 aa28.23■■■□□ 2.11
FOXA1-204ENST00000554607 B4E1Z4 1266 aa28.22■■■□□ 2.11
FOXA1-204ENST00000554607 LPXNO60711 386 aa28.22■■■□□ 2.11
FOXA1-204ENST00000554607 NBNO60934 754 aa28.22■■■□□ 2.11
FOXA1-204ENST00000554607 IKBKEQ14164 716 aa28.22■■■□□ 2.11
FOXA1-204ENST00000554607 MFSD10Q14728 455 aa28.22■■■□□ 2.11
FOXA1-204ENST00000554607 DHX37Q8IY37 1157 aaKnown RBP28.22■■■□□ 2.11
FOXA1-204ENST00000554607 ENAHQ8N8S7 591 aaPredicted RBP28.22■■■□□ 2.11
FOXA1-204ENST00000554607 JMJD4Q9H9V9 463 aa28.22■■■□□ 2.11
FOXA1-204ENST00000554607 PXMP2Q9NR77 195 aa28.22■■■□□ 2.11
FOXA1-204ENST00000554607 ZSWIM5Q9P217 1185 aa28.22■■■□□ 2.11
FOXA1-204ENST00000554607 GJB5O95377 273 aa28.21■■■□□ 2.11
FOXA1-204ENST00000554607 F2P00734 622 aa28.21■■■□□ 2.11
FOXA1-204ENST00000554607 CFBP00751 764 aa28.21■■■□□ 2.11
FOXA1-204ENST00000554607 AAMPQ13685 434 aa28.21■■■□□ 2.11
FOXA1-204ENST00000554607 KIAA0753Q2KHM9 967 aa28.21■■■□□ 2.11
FOXA1-204ENST00000554607 KCNV1Q6PIU1 500 aa28.21■■■□□ 2.11
FOXA1-204ENST00000554607 CWC27Q6UX04 472 aaKnown RBP28.21■■■□□ 2.11
FOXA1-204ENST00000554607 AMNQ9BXJ7 453 aa28.21■■■□□ 2.11
FOXA1-204ENST00000554607 KRT23Q9C075 422 aa28.21■■■□□ 2.11
FOXA1-204ENST00000554607 DIAPH3Q9NSV4 1193 aa28.21■■■□□ 2.11
FOXA1-204ENST00000554607 MAP3K20Q9NYL2 800 aaKnown RBP28.21■■■□□ 2.11
FOXA1-204ENST00000554607 LCHNA4D1U4 455 aa28.2■■■□□ 2.1
FOXA1-204ENST00000554607 HAS3O00219 553 aa28.2■■■□□ 2.1
FOXA1-204ENST00000554607 HIP1O00291 1037 aa28.2■■■□□ 2.1
FOXA1-204ENST00000554607 DEFB103AP81534 67 aa28.2■■■□□ 2.1
FOXA1-204ENST00000554607 IMMTQ16891 758 aaKnown RBP28.2■■■□□ 2.1
FOXA1-204ENST00000554607 CTNNA3Q9UI47 895 aa28.2■■■□□ 2.1
FOXA1-204ENST00000554607 PPFIA4O75335 1185 aa28.19■■■□□ 2.1
FOXA1-204ENST00000554607 PLA2G5P39877 138 aa28.19■■■□□ 2.1
FOXA1-204ENST00000554607 HSD17B4P51659 736 aa28.19■■■□□ 2.1
FOXA1-204ENST00000554607 TMCO2Q7Z6W1 182 aaPredicted RBP28.19■■■□□ 2.1
FOXA1-204ENST00000554607 SAMD3Q8N6K7 520 aa28.19■■■□□ 2.1
FOXA1-204ENST00000554607 FAM122AQ96E09 287 aa28.19■■■□□ 2.1
FOXA1-204ENST00000554607 TGS1Q96RS0 853 aaKnown RBP28.19■■■□□ 2.1
FOXA1-204ENST00000554607 UBAC1Q9BSL1 405 aa28.19■■■□□ 2.1
FOXA1-204ENST00000554607 DSCC1Q9BVC3 393 aa28.19■■■□□ 2.1
FOXA1-204ENST00000554607 OSBPL3Q9H4L5 887 aa28.19■■■□□ 2.1
FOXA1-204ENST00000554607 CNNM2Q9H8M5 875 aa28.19■■■□□ 2.1
FOXA1-204ENST00000554607 MYH6P13533 1939 aa28.19■■■□□ 2.1
FOXA1-204ENST00000554607 ERVK-21P61565 698 aa28.18■■■□□ 2.1
FOXA1-204ENST00000554607 GHRHRQ02643 423 aa28.18■■■□□ 2.1
FOXA1-204ENST00000554607 SPRED2Q7Z698 418 aa28.18■■■□□ 2.1
FOXA1-204ENST00000554607 RWDD1Q9H446 243 aaPredicted RBP28.18■■■□□ 2.1
FOXA1-204ENST00000554607 PTPRSQ13332 1948 aa28.18■■■□□ 2.1
FOXA1-204ENST00000554607 LAMA4Q16363 1823 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms