RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 VAMP4O75379 141 aa5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 ALX3O95076 343 aa5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 FGFR1P11362 822 aa5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 PABPC1P11940 636 aaKnown RBP5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 ELNP15502 786 aa5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 RAB6AP20340 208 aa5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 EVA1CP58658 441 aa5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 AUHQ13825 339 aaKnown RBP5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 DCTN1Q14203 1278 aa5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 FNDC3BQ53EP0 1204 aaKnown RBP5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 ANKRD39Q53RE8 183 aa5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 ATF7IPQ6VMQ6 1270 aa5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 SCUBE1Q8IWY4 988 aa5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 C7orf61Q8IZ16 206 aa5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 UBR7Q8N806 425 aa5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 MFSD2AQ8NA29 543 aa5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 PRPF38AQ8NAV1 312 aaKnown RBP5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 BVESQ8NE79 360 aa5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 RIN3Q8TB24 985 aa5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 RTF1Q92541 710 aaKnown RBP5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 MRGPRX3Q96LB0 322 aa5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 MIPEPQ99797 713 aa5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 ACSS3Q9H6R3 686 aa5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 GP6Q9HCN6 339 aa5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 WHRNQ9P202 907 aa5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 CEP131Q9UPN4 1083 aa5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 MAP3K5Q99683 1374 aa5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 ZNF335Q9H4Z2 1342 aaPredicted RBP5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 PARNO95453 639 aaKnown RBP5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 TRIM27P14373 513 aa5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 SDSP20132 328 aa5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 TRIM28Q13263 835 aaKnown RBP5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 MVPQ14764 893 aaKnown RBP5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 TWISTNBQ3B726 338 aaPredicted RBP5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 LETMD1Q6P1Q0 360 aa5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 MCM10Q7L590 875 aa5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 RNF180Q86T96 592 aa5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 FTSJ3Q8IY81 847 aaKnown RBP5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 DZIP1LQ8IYY4 767 aaKnown RBP5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 ARHGAP45Q92619 1136 aa5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 IER2Q9BTL4 223 aa5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 ATP8A1Q9Y2Q0 1164 aa5.87□□□□□ -1.47
PPP4R3A-204ENST00000554574 PKD1L3Q7Z443 1732 aa5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 SPATA31A3Q5VYP0 1347 aa5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 GNAT3A8MTJ3 354 aa5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 GSG1L2A8MUP6 293 aa5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 TCERG1O14776 1098 aaKnown RBP5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 PPM1BO75688 479 aa5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 SLITRK5O94991 958 aa5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 PDGFRBP09619 1106 aa5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 SUMO1P63165 101 aaKnown RBP5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 NSMFQ6X4W1 530 aa5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 BRINP3Q76B58 766 aa5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 CDH24Q86UP0 819 aa5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 TMEM130Q8N3G9 435 aa5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 TSPYL6Q8N831 410 aa5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 LTV1Q96GA3 475 aaPredicted RBP5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 IPO9Q96P70 1041 aaKnown RBP5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 TARS2Q9BW92 718 aaKnown RBP5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 MRPL4Q9BYD3 311 aaKnown RBP5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 CAAP1Q9H8G2 361 aa5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 LGR6Q9HBX8 967 aa5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 EMC9Q9Y3B6 208 aa5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 DAGLAQ9Y4D2 1042 aa5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 CPDO75976 1380 aa5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 PLEKHG2Q9H7P9 1386 aa5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 OVOS2A0A0G2JMS6 1433 aa5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 GNB5O14775 395 aa5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 C6orf222P0C671 652 aaPredicted RBP5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 RNF4P78317 190 aa5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 GRIK4Q16099 956 aa5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 CDPF1Q6NVV7 123 aa5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 TRIM59Q8IWR1 403 aa5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 SVOPQ8N4V2 548 aa5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 C8orf58Q8NAV2 365 aa5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 BTN2A2Q8WVV5 523 aa5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 SEMA6CQ9H3T2 930 aa5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 TYW1Q9NV66 732 aaKnown RBP5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 BABAM1Q9NWV8 329 aa5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 CGGBP1Q9UFW8 167 aaPredicted RBP5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 PARP4Q9UKK3 1724 aaKnown RBP5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 NOB1Q9ULX3 412 aaKnown RBP5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 DDX19BQ9UMR2 479 aa5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 TNNQ9UQP3 1299 aa5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 AKT3Q9Y243 479 aa5.86□□□□□ -1.47
PPP4R3A-204ENST00000554574 CEMIPQ8WUJ3 1361 aa5.85□□□□□ -1.47
PPP4R3A-204ENST00000554574 SOS1Q07889 1333 aaPredicted RBP5.85□□□□□ -1.47
PPP4R3A-204ENST00000554574 DYNC1LI2O43237 492 aaPredicted RBP5.85□□□□□ -1.47
PPP4R3A-204ENST00000554574 S100BP04271 92 aaPredicted RBP5.85□□□□□ -1.47
PPP4R3A-204ENST00000554574 ITGA4P13612 1032 aa5.85□□□□□ -1.47
PPP4R3A-204ENST00000554574 ZNF445P59923 1031 aa5.85□□□□□ -1.47
PPP4R3A-204ENST00000554574 SF1Q15637 639 aaKnown RBP5.85□□□□□ -1.47
PPP4R3A-204ENST00000554574 NOL8Q76FK4 1167 aaKnown RBP5.85□□□□□ -1.47
PPP4R3A-204ENST00000554574 FERMT3Q86UX7 667 aa5.85□□□□□ -1.47
PPP4R3A-204ENST00000554574 DDX42Q86XP3 938 aaKnown RBP eCLIP5.85□□□□□ -1.47
PPP4R3A-204ENST00000554574 ARHGEF39Q8N4T4 335 aa5.85□□□□□ -1.47
PPP4R3A-204ENST00000554574 DDX17Q92841 729 aaKnown RBP5.85□□□□□ -1.47
PPP4R3A-204ENST00000554574 BRF1Q92994 677 aa5.85□□□□□ -1.47
PPP4R3A-204ENST00000554574 RCC1LQ96I51 464 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms