RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 LDHDQ86WU2 507 aa5.72□□□□□ -1.49
ATXN3-227ENST00000554491 FAM129CQ86XR2 697 aa5.72□□□□□ -1.49
ATXN3-227ENST00000554491 TMEM52Q8NDY8 209 aa5.72□□□□□ -1.49
ATXN3-227ENST00000554491 SLC9A7Q96T83 725 aa5.72□□□□□ -1.49
ATXN3-227ENST00000554491 AP5S1Q9NUS5 200 aa5.72□□□□□ -1.49
ATXN3-227ENST00000554491 GGT7Q9UJ14 662 aa5.72□□□□□ -1.49
ATXN3-227ENST00000554491 PRDM4Q9UKN5 801 aa5.72□□□□□ -1.49
ATXN3-227ENST00000554491 TRPC5Q9UL62 973 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-227ENST00000554491 PTCH1Q13635 1447 aa5.72□□□□□ -1.49
ATXN3-227ENST00000554491 PTPN23Q9H3S7 1636 aa5.71□□□□□ -1.5
ATXN3-227ENST00000554491 TRPM2O94759 1503 aa5.71□□□□□ -1.5
ATXN3-227ENST00000554491 FAM86C2PA6NEL3 165 aa5.71□□□□□ -1.5
ATXN3-227ENST00000554491 ABLIM1O14639 778 aa5.71□□□□□ -1.5
ATXN3-227ENST00000554491 SASH1O94885 1247 aa5.71□□□□□ -1.5
ATXN3-227ENST00000554491 VAV1P15498 845 aa5.71□□□□□ -1.5
ATXN3-227ENST00000554491 MCM4P33991 863 aa5.71□□□□□ -1.5
ATXN3-227ENST00000554491 BMP8BP34820 402 aa5.71□□□□□ -1.5
ATXN3-227ENST00000554491 CCNFP41002 786 aa5.71□□□□□ -1.5
ATXN3-227ENST00000554491 APOBRQ0VD83 1088 aa5.71□□□□□ -1.5
ATXN3-227ENST00000554491 OLFML2BQ68BL8 750 aa5.71□□□□□ -1.5
ATXN3-227ENST00000554491 DEFB132Q7Z7B7 95 aa5.71□□□□□ -1.5
ATXN3-227ENST00000554491 ZDHHC14Q8IZN3 488 aa5.71□□□□□ -1.5
ATXN3-227ENST00000554491 REXO1Q8N1G1 1221 aaKnown RBP5.71□□□□□ -1.5
ATXN3-227ENST00000554491 ANP32BQ92688 251 aaKnown RBP5.71□□□□□ -1.5
ATXN3-227ENST00000554491 JMJD8Q96S16 334 aa5.71□□□□□ -1.5
ATXN3-227ENST00000554491 FBXL21Q9UKT6 434 aa5.71□□□□□ -1.5
ATXN3-227ENST00000554491 PCDHB12Q9Y5F1 795 aa5.71□□□□□ -1.5
ATXN3-227ENST00000554491 PCDHA5Q9Y5H7 936 aa5.71□□□□□ -1.5
ATXN3-227ENST00000554491 CHD4Q14839 1912 aa5.71□□□□□ -1.5
ATXN3-227ENST00000554491 MST1RQ04912 1400 aa5.71□□□□□ -1.5
ATXN3-227ENST00000554491 ZNF644Q9H582 1327 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-227ENST00000554491 ARL4AP40617 200 aa5.7□□□□□ -1.5
ATXN3-227ENST00000554491 MMP14P50281 582 aa5.7□□□□□ -1.5
ATXN3-227ENST00000554491 KRTAP10-2P60368 255 aa5.7□□□□□ -1.5
ATXN3-227ENST00000554491 CYP4F8P98187 520 aa5.7□□□□□ -1.5
ATXN3-227ENST00000554491 AUHQ13825 339 aaKnown RBP5.7□□□□□ -1.5
ATXN3-227ENST00000554491 SKOR2Q2VWA4 1001 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-227ENST00000554491 RTP2Q5QGT7 225 aa5.7□□□□□ -1.5
ATXN3-227ENST00000554491 RPTNQ6XPR3 784 aa5.7□□□□□ -1.5
ATXN3-227ENST00000554491 NUP43Q8NFH3 380 aa5.7□□□□□ -1.5
ATXN3-227ENST00000554491 TNFRSF12AQ9NP84 129 aa5.7□□□□□ -1.5
ATXN3-227ENST00000554491 IMPACTQ9P2X3 320 aa5.7□□□□□ -1.5
ATXN3-227ENST00000554491 ACSL6Q9UKU0 697 aa5.7□□□□□ -1.5
ATXN3-227ENST00000554491 JAG2Q9Y219 1238 aa5.7□□□□□ -1.5
ATXN3-227ENST00000554491 ZFYVE9O95405 1425 aa5.7□□□□□ -1.5
ATXN3-227ENST00000554491 PLEKHG1Q9ULL1 1385 aa5.69□□□□□ -1.5
ATXN3-227ENST00000554491 A0A1W2PQ45 241 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-227ENST00000554491 A0A1W2PQY0 241 aa5.69□□□□□ -1.5
ATXN3-227ENST00000554491 MEIS3P2A8K0S8 358 aa5.69□□□□□ -1.5
ATXN3-227ENST00000554491 TNFRSF10CO14798 259 aa5.69□□□□□ -1.5
ATXN3-227ENST00000554491 SHOXO15266 292 aa5.69□□□□□ -1.5
ATXN3-227ENST00000554491 MSL3P1P0C860 447 aa5.69□□□□□ -1.5
ATXN3-227ENST00000554491 ACRP10323 421 aa5.69□□□□□ -1.5
ATXN3-227ENST00000554491 ATF3P18847 181 aa5.69□□□□□ -1.5
ATXN3-227ENST00000554491 FAM193AP78312 1265 aa5.69□□□□□ -1.5
ATXN3-227ENST00000554491 LAPTM5Q13571 262 aa5.69□□□□□ -1.5
ATXN3-227ENST00000554491 AXDND1Q5T1B0 1012 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-227ENST00000554491 FAM43AQ8N2R8 423 aa5.69□□□□□ -1.5
ATXN3-227ENST00000554491 CXorf38Q8TB03 319 aa5.69□□□□□ -1.5
ATXN3-227ENST00000554491 ZNF622Q969S3 477 aaKnown RBP eCLIP5.69□□□□□ -1.5
ATXN3-227ENST00000554491 PWWP2AQ96N64 755 aa5.69□□□□□ -1.5
ATXN3-227ENST00000554491 ADAM7Q9H2U9 754 aa5.69□□□□□ -1.5
ATXN3-227ENST00000554491 CROCC2H7BZ55 1655 aa5.69□□□□□ -1.5
ATXN3-227ENST00000554491 RREB1Q92766 1687 aa5.69□□□□□ -1.5
ATXN3-227ENST00000554491 ADGRB2O60241 1585 aa5.68□□□□□ -1.5
ATXN3-227ENST00000554491 C9IYK1 514 aa5.68□□□□□ -1.5
ATXN3-227ENST00000554491 ZNF165P49910 485 aa5.68□□□□□ -1.5
ATXN3-227ENST00000554491 CBX2Q14781 532 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-227ENST00000554491 PLEKHN1Q494U1 663 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-227ENST00000554491 HS2ST1Q7LGA3 356 aa5.68□□□□□ -1.5
ATXN3-227ENST00000554491 TP53I13Q8NBR0 393 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-227ENST00000554491 LRRC59Q96AG4 307 aaKnown RBP5.68□□□□□ -1.5
ATXN3-227ENST00000554491 MYOM2P54296 1465 aa5.68□□□□□ -1.5
ATXN3-227ENST00000554491 RALGAPBQ86X10 1494 aa5.68□□□□□ -1.5
ATXN3-227ENST00000554491 PLCH1Q4KWH8 1693 aa5.68□□□□□ -1.5
ATXN3-227ENST00000554491 DUOX2Q9NRD8 1548 aa5.68□□□□□ -1.5
ATXN3-227ENST00000554491 NUP188Q5SRE5 1749 aa5.68□□□□□ -1.5
ATXN3-227ENST00000554491 TMEM131LA2VDJ0 1609 aa5.67□□□□□ -1.5
ATXN3-227ENST00000554491 BUB1BO60566 1050 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-227ENST00000554491 ITGAEP38570 1179 aa5.67□□□□□ -1.5
ATXN3-227ENST00000554491 LIMS1P48059 325 aa5.67□□□□□ -1.5
ATXN3-227ENST00000554491 ZNF200P98182 395 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-227ENST00000554491 MVKQ03426 396 aa5.67□□□□□ -1.5
ATXN3-227ENST00000554491 MRPL58Q14197 206 aaKnown RBP5.67□□□□□ -1.5
ATXN3-227ENST00000554491 LRRFIP1Q32MZ4 808 aaKnown RBP5.67□□□□□ -1.5
ATXN3-227ENST00000554491 SLITRK4Q8IW52 837 aa5.67□□□□□ -1.5
ATXN3-227ENST00000554491 LINC01356Q8N9X3 169 aa5.67□□□□□ -1.5
ATXN3-227ENST00000554491 NKD1Q969G9 470 aa5.67□□□□□ -1.5
ATXN3-227ENST00000554491 EAF1Q96JC9 268 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-227ENST00000554491 DNAJC2Q99543 621 aaKnown RBP5.67□□□□□ -1.5
ATXN3-227ENST00000554491 SLC12A9Q9BXP2 914 aa5.67□□□□□ -1.5
ATXN3-227ENST00000554491 SUCOQ9UBS9 1254 aaKnown RBP5.67□□□□□ -1.5
ATXN3-227ENST00000554491 KCNG1Q9UIX4 513 aa5.67□□□□□ -1.5
ATXN3-227ENST00000554491 PLA2G2DQ9UNK4 145 aa5.67□□□□□ -1.5
ATXN3-227ENST00000554491 HCFC2Q9Y5Z7 792 aa5.67□□□□□ -1.5
ATXN3-227ENST00000554491 LMTK2Q8IWU2 1503 aa5.67□□□□□ -1.5
ATXN3-227ENST00000554491 MTUS2Q5JR59 1369 aa5.67□□□□□ -1.5
ATXN3-227ENST00000554491 CEP162Q5TB80 1403 aa5.66□□□□□ -1.5
ATXN3-227ENST00000554491 ADAMTS13Q76LX8 1427 aa5.66□□□□□ -1.5
ATXN3-227ENST00000554491 NWD2Q9ULI1 1742 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms