RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 NOP53Q9NZM5 478 aaKnown RBP2.91□□□□□ -1.94
PRPF39-207ENST00000554439 SIRPGQ9P1W8 387 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 VPS18Q9P253 973 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 KANSL3Q9P2N6 904 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 DNMT3LQ9UJW3 386 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 MAST3O60307 1309 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 DIP2AQ14689 1571 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 KLF18A0A0U1RQI7 1052 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 GOLGA8BA8MQT2 603 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 FOXP2O15409 715 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 NRDCO43847 1150 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 CES1P23141 567 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 TNNT3P45378 269 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-207ENST00000554439 KCNJ6P48051 423 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 FCGRTP55899 365 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 MYL5Q02045 173 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 KIF23Q02241 960 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-207ENST00000554439 GRIN1Q05586 938 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 MUM1L1Q5H9M0 696 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 C1orf141Q5JVX7 400 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 PCNX4Q63HM2 1172 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 ATL3Q6DD88 541 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 CYB5RLQ6IPT4 315 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 SYNE3Q6ZMZ3 975 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 BICDL1Q6ZP65 573 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 TC2NQ8N9U0 490 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 FBXO18Q8NFZ0 1043 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 CCDC12Q8WUD4 166 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-207ENST00000554439 IP6K1Q92551 441 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 PHKBQ93100 1093 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 ZNF274Q96GC6 653 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-207ENST00000554439 SRPK1Q96SB4 655 aaKnown RBP2.91□□□□□ -1.94
PRPF39-207ENST00000554439 PNKPQ96T60 521 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 BAG1Q99933 345 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-207ENST00000554439 BRINP2Q9C0B6 783 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 EHD4Q9H223 541 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 RASSF4Q9H2L5 321 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 SEC31BQ9NQW1 1179 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 DDX21Q9NR30 783 aaKnown RBP eCLIP2.91□□□□□ -1.942e-13■□□□□ 9.6
PRPF39-207ENST00000554439 ATG3Q9NT62 314 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 PAG1Q9NWQ8 432 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 HCN2Q9UL51 889 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 RRP15Q9Y3B9 282 aaKnown RBP2.91□□□□□ -1.94
PRPF39-207ENST00000554439 TNRQ92752 1358 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 SH3TC1Q8TE82 1336 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 A0A087WZG4 1122 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 C1QTNF9BB2RNN3 333 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 IKBKBO14920 756 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 ARHGAP6O43182 974 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 PRC1O43663 620 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 YEATS4O95619 227 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 DDX58O95786 925 aaKnown RBP2.91□□□□□ -1.94
PRPF39-207ENST00000554439 CELA3AP09093 270 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 RHOXF2BP0C7M4 288 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 CMA1P23946 247 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 MSX1P28360 303 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 NOP2P46087 812 aaKnown RBP2.91□□□□□ -1.94
PRPF39-207ENST00000554439 ANTXR2P58335 489 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 FAM193AP78312 1265 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 PWP1Q13610 501 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 LRRC24Q50LG9 513 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 PLEKHG4Q58EX7 1191 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 LMBR1LQ6UX01 489 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 PRICKLE2Q7Z3G6 844 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 SRLQ86TD4 932 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 CREBRFQ8IUR6 639 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 RELL1Q8IUW5 271 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 LINC00528Q8N1L1 170 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 CELF2-AS1Q8N7Q2 184 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 FAM169BQ8N8A8 192 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 CPLX3Q8WVH0 158 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 MED15Q96RN5 788 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 RHOXF2Q9BQY4 288 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 DSCC1Q9BVC3 393 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 SRRTQ9BXP5 876 aaKnown RBP2.91□□□□□ -1.94
PRPF39-207ENST00000554439 TEX13AQ9BXU3 409 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-207ENST00000554439 ANKZF1Q9H8Y5 726 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 C11orf16Q9NQ32 467 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 INCENPQ9NQS7 918 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 SAMSN1Q9NSI8 373 aaKnown RBP2.91□□□□□ -1.94
PRPF39-207ENST00000554439 TUBE1Q9UJT0 475 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 STRIP2Q9ULQ0 834 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 PPM1HQ9ULR3 514 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 FAN1Q9Y2M0 1017 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 PCDHA5Q9Y5H7 936 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 HEG1Q9ULI3 1381 aa2.91□□□□□ -1.94
PRPF39-207ENST00000554439 UBR1Q8IWV7 1749 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 MRC1P22897 1456 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 NWD2Q9ULI1 1742 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 TMEM238LA0A1B0GVL6 79 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 A0A1W2PNR3 127 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 ENC1O14682 589 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 MAP2K7O14733 419 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 CPLX1O14810 134 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 TEX33O43247 280 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 ZSCAN12O43309 604 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 DHX16O60231 1041 aaKnown RBP2.9□□□□□ -1.94
PRPF39-207ENST00000554439 FGAP02671 866 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 PF4P02776 101 aa2.9□□□□□ -1.94
PRPF39-207ENST00000554439 ACPPP15309 386 aa2.9□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms