RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 RNASE1P07998 156 aaKnown RBP7.27□□□□□ -1.25
CHD8-207ENST00000554384 COL6A2P12110 1019 aa7.27□□□□□ -1.25
CHD8-207ENST00000554384 DNM2P50570 870 aa7.27□□□□□ -1.25
CHD8-207ENST00000554384 RPL11P62913 178 aaKnown RBP7.27□□□□□ -1.25
CHD8-207ENST00000554384 MVKQ03426 396 aa7.27□□□□□ -1.25
CHD8-207ENST00000554384 DUSP4Q13115 394 aa7.27□□□□□ -1.25
CHD8-207ENST00000554384 PAK1Q13153 545 aa7.27□□□□□ -1.25
CHD8-207ENST00000554384 LSAMPQ13449 338 aa7.27□□□□□ -1.25
CHD8-207ENST00000554384 SLC14A2Q15849 920 aa7.27□□□□□ -1.25
CHD8-207ENST00000554384 CFAP100Q494V2 611 aa7.27□□□□□ -1.25
CHD8-207ENST00000554384 TP53INP2Q8IXH6 220 aa7.27□□□□□ -1.25
CHD8-207ENST00000554384 SIRT2Q8IXJ6 389 aa7.27□□□□□ -1.25
CHD8-207ENST00000554384 CAAP1Q9H8G2 361 aa7.27□□□□□ -1.25
CHD8-207ENST00000554384 MYO1BO43795 1136 aa7.26□□□□□ -1.25
CHD8-207ENST00000554384 PYGMP11217 842 aa7.26□□□□□ -1.25
CHD8-207ENST00000554384 YBX3P16989 372 aaKnown RBP eCLIP7.26□□□□□ -1.257e-8■□□□□ 10.1
CHD8-207ENST00000554384 ZCCHC8Q6NZY4 707 aaKnown RBP7.26□□□□□ -1.25
CHD8-207ENST00000554384 SLC23A3Q6PIS1 610 aa7.26□□□□□ -1.25
CHD8-207ENST00000554384 RPUSD2Q8IZ73 545 aaKnown RBP7.26□□□□□ -1.25
CHD8-207ENST00000554384 NXPE1Q8N323 547 aa7.26□□□□□ -1.25
CHD8-207ENST00000554384 PLEKHO2Q8TD55 490 aa7.26□□□□□ -1.25
CHD8-207ENST00000554384 ALG1Q9BT22 464 aa7.26□□□□□ -1.25
CHD8-207ENST00000554384 MTA3Q9BTC8 594 aa7.26□□□□□ -1.25
CHD8-207ENST00000554384 CBLCQ9ULV8 474 aa7.26□□□□□ -1.25
CHD8-207ENST00000554384 NOP58Q9Y2X3 529 aaKnown RBP7.26□□□□□ -1.25
CHD8-207ENST00000554384 A0A1W2PQ45 241 aaPredicted RBP7.25□□□□□ -1.25
CHD8-207ENST00000554384 A0A1W2PQY0 241 aa7.25□□□□□ -1.25
CHD8-207ENST00000554384 C22orf46C9J442 243 aa7.25□□□□□ -1.25
CHD8-207ENST00000554384 M0R2C6 588 aa7.25□□□□□ -1.25
CHD8-207ENST00000554384 PRKCAP17252 672 aa7.25□□□□□ -1.25
CHD8-207ENST00000554384 GRK2P25098 689 aa7.25□□□□□ -1.25
CHD8-207ENST00000554384 GRK3P35626 688 aa7.25□□□□□ -1.25
CHD8-207ENST00000554384 KIR2DL1P43626 348 aaPredicted RBP7.25□□□□□ -1.25
CHD8-207ENST00000554384 KIR2DL2P43627 348 aaPredicted RBP7.25□□□□□ -1.25
CHD8-207ENST00000554384 CDKN1CP49918 316 aaPredicted RBP7.25□□□□□ -1.25
CHD8-207ENST00000554384 IGBP1P78318 339 aa7.25□□□□□ -1.25
CHD8-207ENST00000554384 NFKB2Q00653 900 aa7.25□□□□□ -1.25
CHD8-207ENST00000554384 STRN3Q13033 797 aa7.25□□□□□ -1.25
CHD8-207ENST00000554384 KIZQ2M2Z5 673 aa7.25□□□□□ -1.25
CHD8-207ENST00000554384 CT47A1Q5JQC4 288 aaPredicted RBP7.25□□□□□ -1.25
CHD8-207ENST00000554384 DDX42Q86XP3 938 aaKnown RBP eCLIP7.25□□□□□ -1.25
CHD8-207ENST00000554384 ANKRD13AQ8IZ07 590 aa7.25□□□□□ -1.25
CHD8-207ENST00000554384 CISD2Q8N5K1 135 aaKnown RBP7.25□□□□□ -1.25
CHD8-207ENST00000554384 NUP43Q8NFH3 380 aa7.25□□□□□ -1.25
CHD8-207ENST00000554384 TMEM169Q96HH4 297 aa7.25□□□□□ -1.25
CHD8-207ENST00000554384 RXFP1Q9HBX9 757 aa7.25□□□□□ -1.25
CHD8-207ENST00000554384 MAPRE3Q9UPY8 281 aa7.25□□□□□ -1.25
CHD8-207ENST00000554384 CCDC66A2RUB6 948 aa7.24□□□□□ -1.25
CHD8-207ENST00000554384 ZNF891A8MT65 544 aaPredicted RBP7.24□□□□□ -1.25
CHD8-207ENST00000554384 KCNK3O14649 394 aa7.24□□□□□ -1.25
CHD8-207ENST00000554384 IBSPP21815 317 aaPredicted RBP7.24□□□□□ -1.25
CHD8-207ENST00000554384 ZNF792Q3KQV3 632 aa7.24□□□□□ -1.25
CHD8-207ENST00000554384 LHFPL2Q6ZUX7 228 aa7.24□□□□□ -1.25
CHD8-207ENST00000554384 UBE2R2Q712K3 238 aaPredicted RBP7.24□□□□□ -1.25
CHD8-207ENST00000554384 ABI1Q8IZP0 508 aa7.24□□□□□ -1.25
CHD8-207ENST00000554384 ANKS4BQ8N8V4 417 aa7.24□□□□□ -1.25
CHD8-207ENST00000554384 PDZD8Q8NEN9 1154 aa7.24□□□□□ -1.25
CHD8-207ENST00000554384 ZCRB1Q8TBF4 217 aaKnown RBP7.24□□□□□ -1.25
CHD8-207ENST00000554384 USP33Q8TEY7 942 aa7.24□□□□□ -1.25
CHD8-207ENST00000554384 ASIC4Q96FT7 647 aa7.24□□□□□ -1.25
CHD8-207ENST00000554384 TRMT2BQ96GJ1 504 aaKnown RBP7.24□□□□□ -1.25
CHD8-207ENST00000554384 WNK4Q96J92 1243 aa7.24□□□□□ -1.25
CHD8-207ENST00000554384 TAF6LQ9Y6J9 622 aa7.24□□□□□ -1.25
CHD8-207ENST00000554384 A0A1W2PQ27 194 aa7.23□□□□□ -1.25
CHD8-207ENST00000554384 A0A1W2PQ64 194 aa7.23□□□□□ -1.25
CHD8-207ENST00000554384 A0A1W2PQC6 194 aa7.23□□□□□ -1.25
CHD8-207ENST00000554384 A0A1W2PQD8 194 aa7.23□□□□□ -1.25
CHD8-207ENST00000554384 FAM47E-STBD1D6RA91 191 aa7.23□□□□□ -1.25
CHD8-207ENST00000554384 TRAF5O00463 557 aa7.23□□□□□ -1.25
CHD8-207ENST00000554384 NRDCO43847 1150 aa7.23□□□□□ -1.25
CHD8-207ENST00000554384 POU3F2P20265 443 aaPredicted RBP7.23□□□□□ -1.25
CHD8-207ENST00000554384 SDHBP21912 280 aa7.23□□□□□ -1.25
CHD8-207ENST00000554384 SOX5P35711 763 aa7.23□□□□□ -1.25
CHD8-207ENST00000554384 ANAPC15P60006 121 aa7.23□□□□□ -1.25
CHD8-207ENST00000554384 DDX46Q7L014 1031 aaKnown RBP7.23□□□□□ -1.25
CHD8-207ENST00000554384 OSTM1Q86WC4 334 aa7.23□□□□□ -1.25
CHD8-207ENST00000554384 RBM12BQ8IXT5 1001 aaKnown RBP7.23□□□□□ -1.25
CHD8-207ENST00000554384 AFAP1L2Q8N4X5 818 aa7.23□□□□□ -1.25
CHD8-207ENST00000554384 LZTR1Q8N653 840 aa7.23□□□□□ -1.25
CHD8-207ENST00000554384 FBXW5Q969U6 566 aa7.23□□□□□ -1.25
CHD8-207ENST00000554384 SHISA4Q96DD7 197 aa7.23□□□□□ -1.25
CHD8-207ENST00000554384 CATSPERZQ9NTU4 200 aa7.23□□□□□ -1.25
CHD8-207ENST00000554384 ATP8A1Q9Y2Q0 1164 aa7.23□□□□□ -1.25
CHD8-207ENST00000554384 TCRBV5S4A2TA0A5A2 114 aa7.22□□□□□ -1.25
CHD8-207ENST00000554384 NKRFO15226 690 aaKnown RBP eCLIP7.22□□□□□ -1.25
CHD8-207ENST00000554384 NTRK1P04629 796 aa7.22□□□□□ -1.25
CHD8-207ENST00000554384 PDE6AP16499 860 aa7.22□□□□□ -1.25
CHD8-207ENST00000554384 KRT15P19012 456 aa7.22□□□□□ -1.25
CHD8-207ENST00000554384 ID4P47928 161 aa7.22□□□□□ -1.25
CHD8-207ENST00000554384 TMEM177Q53S58 311 aa7.22□□□□□ -1.25
CHD8-207ENST00000554384 FYB2Q5VWT5 728 aa7.22□□□□□ -1.25
CHD8-207ENST00000554384 GALNT18Q6P9A2 607 aa7.22□□□□□ -1.25
CHD8-207ENST00000554384 OVCH1Q7RTY7 1134 aa7.22□□□□□ -1.25
CHD8-207ENST00000554384 DDX53Q86TM3 631 aaKnown RBP7.22□□□□□ -1.25
CHD8-207ENST00000554384 PPM1KQ8N3J5 372 aa7.22□□□□□ -1.25
CHD8-207ENST00000554384 PRPF38AQ8NAV1 312 aaKnown RBP7.22□□□□□ -1.25
CHD8-207ENST00000554384 NLGN2Q8NFZ4 835 aa7.22□□□□□ -1.25
CHD8-207ENST00000554384 BRINP2Q9C0B6 783 aa7.22□□□□□ -1.25
CHD8-207ENST00000554384 GPR160Q9UJ42 338 aa7.22□□□□□ -1.25
CHD8-207ENST00000554384 ACSL6Q9UKU0 697 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms