RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 GTPBP6O43824 516 aaPredicted RBP16.27■□□□□ 0.2
SPTLC2-202ENST00000554365 KPNA6O60684 536 aa16.27■□□□□ 0.2
SPTLC2-202ENST00000554365 IQCF3P0C7M6 154 aa16.27■□□□□ 0.2
SPTLC2-202ENST00000554365 GOLGA8HP0CJ92 632 aa16.27■□□□□ 0.2
SPTLC2-202ENST00000554365 PCP11498 1178 aaKnown RBP16.27■□□□□ 0.2
SPTLC2-202ENST00000554365 CASTP20810 708 aaKnown RBP16.27■□□□□ 0.2
SPTLC2-202ENST00000554365 MRPL12P52815 198 aaKnown RBP16.27■□□□□ 0.2
SPTLC2-202ENST00000554365 ANTXR2P58335 489 aa16.27■□□□□ 0.2
SPTLC2-202ENST00000554365 EXOSC10Q01780 885 aaKnown RBP16.27■□□□□ 0.2
SPTLC2-202ENST00000554365 TFF2Q03403 129 aa16.27■□□□□ 0.2
SPTLC2-202ENST00000554365 RABEP1Q15276 862 aa16.27■□□□□ 0.2
SPTLC2-202ENST00000554365 NFRKBQ6P4R8 1299 aa16.27■□□□□ 0.2
SPTLC2-202ENST00000554365 MFSD6Q6ZSS7 791 aa16.27■□□□□ 0.2
SPTLC2-202ENST00000554365 CYB5R4Q7L1T6 521 aa16.27■□□□□ 0.2
SPTLC2-202ENST00000554365 TTC14Q96N46 770 aa16.27■□□□□ 0.2
SPTLC2-202ENST00000554365 SLC9A7Q96T83 725 aa16.27■□□□□ 0.2
SPTLC2-202ENST00000554365 UPF3BQ9BZI7 483 aaKnown RBP16.27■□□□□ 0.2
SPTLC2-202ENST00000554365 RNF41Q9H4P4 317 aaPredicted RBP16.27■□□□□ 0.2
SPTLC2-202ENST00000554365 SCN5AQ14524 2016 aa16.26■□□□□ 0.19
SPTLC2-202ENST00000554365 B4E1Z4 1266 aa16.26■□□□□ 0.19
SPTLC2-202ENST00000554365 PITPNM1O00562 1244 aa16.26■□□□□ 0.19
SPTLC2-202ENST00000554365 SNHG28P0DPA3 235 aa16.26■□□□□ 0.19
SPTLC2-202ENST00000554365 RPS6KB1P23443 525 aa16.26■□□□□ 0.19
SPTLC2-202ENST00000554365 PSMA5P28066 241 aa16.26■□□□□ 0.19
SPTLC2-202ENST00000554365 PTPN11Q06124 597 aaPredicted RBP16.26■□□□□ 0.19
SPTLC2-202ENST00000554365 BFSP2Q13515 415 aa16.26■□□□□ 0.19
SPTLC2-202ENST00000554365 NCOA7Q8NI08 942 aa16.26■□□□□ 0.19
SPTLC2-202ENST00000554365 ARNTL2Q8WYA1 636 aa16.26■□□□□ 0.19
SPTLC2-202ENST00000554365 NECAB3Q96P71 396 aaPredicted RBP16.26■□□□□ 0.19
SPTLC2-202ENST00000554365 ZKSCAN3Q9BRR0 538 aa16.26■□□□□ 0.19
SPTLC2-202ENST00000554365 UBA5Q9GZZ9 404 aa16.26■□□□□ 0.19
SPTLC2-202ENST00000554365 CPVLQ9H3G5 476 aa16.26■□□□□ 0.19
SPTLC2-202ENST00000554365 RAPGEFL1Q9UHV5 662 aa16.26■□□□□ 0.19
SPTLC2-202ENST00000554365 RBM19Q9Y4C8 960 aaKnown RBP16.26■□□□□ 0.19
SPTLC2-202ENST00000554365 CHD7Q9P2D1 2997 aa16.26■□□□□ 0.19
SPTLC2-202ENST00000554365 KIF28PB7ZC32 967 aa16.25■□□□□ 0.19
SPTLC2-202ENST00000554365 ARIH2O95376 493 aa16.25■□□□□ 0.19
SPTLC2-202ENST00000554365 PTGISQ16647 500 aa16.25■□□□□ 0.19
SPTLC2-202ENST00000554365 AAK1Q2M2I8 961 aa16.25■□□□□ 0.19
SPTLC2-202ENST00000554365 GPATCH4Q5T3I0 446 aaKnown RBP16.25■□□□□ 0.19
SPTLC2-202ENST00000554365 BLOC1S2Q6QNY1 142 aa16.25■□□□□ 0.19
SPTLC2-202ENST00000554365 RUFY3Q7L099 469 aa16.25■□□□□ 0.19
SPTLC2-202ENST00000554365 HERC6Q8IVU3 1022 aa16.25■□□□□ 0.19
SPTLC2-202ENST00000554365 PHOSPHO2Q8TCD6 241 aa16.25■□□□□ 0.19
SPTLC2-202ENST00000554365 KRT23Q9C075 422 aa16.25■□□□□ 0.19
SPTLC2-202ENST00000554365 CNNM2Q9H8M5 875 aa16.25■□□□□ 0.19
SPTLC2-202ENST00000554365 MTCH2Q9Y6C9 303 aa16.25■□□□□ 0.19
SPTLC2-202ENST00000554365 SCN10AQ9Y5Y9 1956 aa16.24■□□□□ 0.19
SPTLC2-202ENST00000554365 EPOPA6NHQ4 379 aa16.24■□□□□ 0.19
SPTLC2-202ENST00000554365 KDM4AO75164 1064 aa16.24■□□□□ 0.19
SPTLC2-202ENST00000554365 CD2BP2O95400 341 aaKnown RBP16.24■□□□□ 0.19
SPTLC2-202ENST00000554365 BMP1P13497 986 aa16.24■□□□□ 0.19
SPTLC2-202ENST00000554365 KCNQ1P51787 676 aa16.24■□□□□ 0.19
SPTLC2-202ENST00000554365 LY6KQ17RY6 165 aa16.24■□□□□ 0.19
SPTLC2-202ENST00000554365 KRT40Q6A162 431 aa16.24■□□□□ 0.19
SPTLC2-202ENST00000554365 SEPT14Q6ZU15 432 aa16.24■□□□□ 0.19
SPTLC2-202ENST00000554365 DHX32Q7L7V1 743 aaKnown RBP16.24■□□□□ 0.19
SPTLC2-202ENST00000554365 CHST3Q7LGC8 479 aa16.24■□□□□ 0.19
SPTLC2-202ENST00000554365 AFG1LQ8WV93 481 aa16.24■□□□□ 0.19
SPTLC2-202ENST00000554365 TBC1D5Q92609 795 aa16.24■□□□□ 0.19
SPTLC2-202ENST00000554365 ESR2Q92731 530 aa16.24■□□□□ 0.19
SPTLC2-202ENST00000554365 TCEANC2Q96MN5 208 aa16.24■□□□□ 0.19
SPTLC2-202ENST00000554365 ZSWIM5Q9P217 1185 aa16.24■□□□□ 0.19
SPTLC2-202ENST00000554365 TANC1Q9C0D5 1861 aa16.23■□□□□ 0.19
SPTLC2-202ENST00000554365 ARHGEF15O94989 841 aa16.23■□□□□ 0.19
SPTLC2-202ENST00000554365 GH1P01241 217 aa16.23■□□□□ 0.19
SPTLC2-202ENST00000554365 MMP3P08254 477 aa16.23■□□□□ 0.19
SPTLC2-202ENST00000554365 HMGB1P09429 215 aaKnown RBP16.23■□□□□ 0.19
SPTLC2-202ENST00000554365 KCNJ6P48051 423 aa16.23■□□□□ 0.19
SPTLC2-202ENST00000554365 NEK4P51957 841 aa16.23■□□□□ 0.19
SPTLC2-202ENST00000554365 TAP1Q03518 808 aa16.23■□□□□ 0.19
SPTLC2-202ENST00000554365 TRDNQ13061 729 aa16.23■□□□□ 0.19
SPTLC2-202ENST00000554365 CDC37Q16543 378 aaPredicted RBP16.23■□□□□ 0.19
SPTLC2-202ENST00000554365 RALYLQ86SE5 291 aaKnown RBP16.23■□□□□ 0.19
SPTLC2-202ENST00000554365 CCDC155Q8N6L0 562 aa16.23■□□□□ 0.19
SPTLC2-202ENST00000554365 RGS22Q8NE09 1264 aa16.23■□□□□ 0.19
SPTLC2-202ENST00000554365 TAAR1Q96RJ0 339 aa16.23■□□□□ 0.19
SPTLC2-202ENST00000554365 CYP46A1Q9Y6A2 500 aa16.23■□□□□ 0.19
SPTLC2-202ENST00000554365 PRC1O43663 620 aa16.22■□□□□ 0.19
SPTLC2-202ENST00000554365 TLL1O43897 1013 aa16.22■□□□□ 0.19
SPTLC2-202ENST00000554365 BAIAP3O94812 1187 aa16.22■□□□□ 0.19
SPTLC2-202ENST00000554365 POU3F3P20264 500 aaPredicted RBP16.22■□□□□ 0.19
SPTLC2-202ENST00000554365 GDF6Q6KF10 455 aaPredicted RBP16.22■□□□□ 0.19
SPTLC2-202ENST00000554365 CCDC62Q6P9F0 684 aa16.22■□□□□ 0.19
SPTLC2-202ENST00000554365 PNMA1Q8ND90 353 aa16.22■□□□□ 0.19
SPTLC2-202ENST00000554365 CAGE1Q8TC20 777 aa16.22■□□□□ 0.19
SPTLC2-202ENST00000554365 SYTL5Q8TDW5 730 aaPredicted RBP16.22■□□□□ 0.19
SPTLC2-202ENST00000554365 AFAP1L1Q8TED9 768 aa16.22■□□□□ 0.19
SPTLC2-202ENST00000554365 LRRC2Q9BYS8 371 aa16.22■□□□□ 0.19
SPTLC2-202ENST00000554365 AGXT2Q9BYV1 514 aa16.22■□□□□ 0.19
SPTLC2-202ENST00000554365 KAT14Q9H8E8 782 aa16.22■□□□□ 0.19
SPTLC2-202ENST00000554365 ABCB11O95342 1321 aa16.21■□□□□ 0.19
SPTLC2-202ENST00000554365 XIRP2A4UGR9 3374 aa16.21■□□□□ 0.19
SPTLC2-202ENST00000554365 DHX16O60231 1041 aaKnown RBP16.21■□□□□ 0.19
SPTLC2-202ENST00000554365 MCM5P33992 734 aa16.21■□□□□ 0.19
SPTLC2-202ENST00000554365 NT5C2P49902 561 aa16.21■□□□□ 0.19
SPTLC2-202ENST00000554365 ARHGAP1Q07960 439 aa16.21■□□□□ 0.19
SPTLC2-202ENST00000554365 TOB2Q14106 344 aaPredicted RBP16.21■□□□□ 0.19
SPTLC2-202ENST00000554365 STXBP2Q15833 593 aa16.21■□□□□ 0.19
SPTLC2-202ENST00000554365 TMCO2Q7Z6W1 182 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms