RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 PDPK1O15530 556 aa7.32□□□□□ -1.24
ATXN3-225ENST00000554214 FPR2P25090 351 aa7.32□□□□□ -1.24
ATXN3-225ENST00000554214 LIMS1P48059 325 aa7.32□□□□□ -1.24
ATXN3-225ENST00000554214 AFF3P51826 1226 aaKnown RBP7.32□□□□□ -1.24
ATXN3-225ENST00000554214 FOXO4P98177 505 aa7.32□□□□□ -1.24
ATXN3-225ENST00000554214 LSAMPQ13449 338 aa7.32□□□□□ -1.24
ATXN3-225ENST00000554214 NBPF6Q5VWK0 638 aa7.32□□□□□ -1.24
ATXN3-225ENST00000554214 LRRC47Q8N1G4 583 aaKnown RBP7.32□□□□□ -1.24
ATXN3-225ENST00000554214 TMEM169Q96HH4 297 aa7.32□□□□□ -1.24
ATXN3-225ENST00000554214 NBPF4Q96M43 638 aa7.32□□□□□ -1.24
ATXN3-225ENST00000554214 RNF38Q9H0F5 515 aa7.32□□□□□ -1.24
ATXN3-225ENST00000554214 CCDC113Q9H0I3 377 aa7.32□□□□□ -1.24
ATXN3-225ENST00000554214 ARHGEF4Q9NR80 690 aa7.32□□□□□ -1.24
ATXN3-225ENST00000554214 SIRPGQ9P1W8 387 aa7.32□□□□□ -1.24
ATXN3-225ENST00000554214 MSRB2Q9Y3D2 182 aa7.32□□□□□ -1.24
ATXN3-225ENST00000554214 SMARCA2P51531 1590 aa7.32□□□□□ -1.24
ATXN3-225ENST00000554214 THOC2Q8NI27 1593 aaKnown RBP7.32□□□□□ -1.24
ATXN3-225ENST00000554214 SGSM2O43147 1006 aa7.31□□□□□ -1.24
ATXN3-225ENST00000554214 PMLP29590 882 aa7.31□□□□□ -1.24
ATXN3-225ENST00000554214 MROH9Q5TGP6 573 aa7.31□□□□□ -1.24
ATXN3-225ENST00000554214 NSMFQ6X4W1 530 aa7.31□□□□□ -1.24
ATXN3-225ENST00000554214 USP53Q70EK8 1073 aa7.31□□□□□ -1.24
ATXN3-225ENST00000554214 SPATC1Q76KD6 591 aa7.31□□□□□ -1.24
ATXN3-225ENST00000554214 DCP2Q8IU60 420 aaKnown RBP7.31□□□□□ -1.24
ATXN3-225ENST00000554214 NLGN1Q8N2Q7 840 aa7.31□□□□□ -1.24
ATXN3-225ENST00000554214 ZNF669Q96BR6 464 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-225ENST00000554214 ARMC5Q96C12 935 aa7.31□□□□□ -1.24
ATXN3-225ENST00000554214 AP5M1Q9H0R1 490 aa7.31□□□□□ -1.24
ATXN3-225ENST00000554214 FAN1Q9Y2M0 1017 aa7.31□□□□□ -1.24
ATXN3-225ENST00000554214 NPFFR2Q9Y5X5 522 aa7.31□□□□□ -1.24
ATXN3-225ENST00000554214 X6R8D5 127 aa7.31□□□□□ -1.24
ATXN3-225ENST00000554214 FGFR1P11362 822 aa7.3□□□□□ -1.24
ATXN3-225ENST00000554214 PABPC1P11940 636 aaKnown RBP7.3□□□□□ -1.24
ATXN3-225ENST00000554214 MC3RP41968 323 aa7.3□□□□□ -1.24
ATXN3-225ENST00000554214 VMACQ2NL98 169 aa7.3□□□□□ -1.24
ATXN3-225ENST00000554214 RIOX2Q8IUF8 465 aa7.3□□□□□ -1.24
ATXN3-225ENST00000554214 OSBP2Q969R2 916 aa7.3□□□□□ -1.24
ATXN3-225ENST00000554214 SPATA9Q9BWV2 254 aa7.3□□□□□ -1.24
ATXN3-225ENST00000554214 CLDND1Q9NY35 253 aa7.3□□□□□ -1.24
ATXN3-225ENST00000554214 FBXL7Q9UJT9 491 aa7.3□□□□□ -1.24
ATXN3-225ENST00000554214 COA3Q9Y2R0 106 aaPredicted RBP7.3□□□□□ -1.24
ATXN3-225ENST00000554214 TRAV20A0A0B4J274 112 aa7.29□□□□□ -1.24
ATXN3-225ENST00000554214 H7BY64 318 aa7.29□□□□□ -1.24
ATXN3-225ENST00000554214 BMP7P18075 431 aa7.29□□□□□ -1.24
ATXN3-225ENST00000554214 RASGRF1Q13972 1273 aa7.29□□□□□ -1.24
ATXN3-225ENST00000554214 MTERF2Q49AM1 385 aa7.29□□□□□ -1.24
ATXN3-225ENST00000554214 YOD1Q5VVQ6 348 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-225ENST00000554214 NLRP10Q86W26 655 aa7.29□□□□□ -1.24
ATXN3-225ENST00000554214 SEC14L1Q92503 715 aa7.29□□□□□ -1.24
ATXN3-225ENST00000554214 GPR27Q9NS67 375 aa7.29□□□□□ -1.24
ATXN3-225ENST00000554214 PFDN2Q9UHV9 154 aa7.29□□□□□ -1.24
ATXN3-225ENST00000554214 NCAPD3P42695 1498 aa7.29□□□□□ -1.24
ATXN3-225ENST00000554214 KIF21AQ7Z4S6 1674 aa7.28□□□□□ -1.24
ATXN3-225ENST00000554214 CACNB2Q08289 660 aaPredicted RBP7.28□□□□□ -1.24
ATXN3-225ENST00000554214 MILR1Q7Z6M3 343 aa7.28□□□□□ -1.24
ATXN3-225ENST00000554214 B3GNT8Q7Z7M8 397 aa7.28□□□□□ -1.24
ATXN3-225ENST00000554214 Q8N1Y9 231 aa7.28□□□□□ -1.24
ATXN3-225ENST00000554214 CPA5Q8WXQ8 436 aa7.28□□□□□ -1.24
ATXN3-225ENST00000554214 PALD1Q9ULE6 856 aa7.28□□□□□ -1.24
ATXN3-225ENST00000554214 MSCO60682 206 aa7.27□□□□□ -1.25
ATXN3-225ENST00000554214 SLC6A11P48066 632 aa7.27□□□□□ -1.25
ATXN3-225ENST00000554214 SSRP1Q08945 709 aaKnown RBP7.27□□□□□ -1.25
ATXN3-225ENST00000554214 IFRD2Q12894 506 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-225ENST00000554214 KCNT2Q6UVM3 1135 aa7.27□□□□□ -1.25
ATXN3-225ENST00000554214 RSPO2Q6UXX9 243 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-225ENST00000554214 DCAF4Q8WV16 495 aa7.27□□□□□ -1.25
ATXN3-225ENST00000554214 PHF20Q9BVI0 1012 aa7.27□□□□□ -1.25
ATXN3-225ENST00000554214 PMF1-BGLAPU3KQ54 211 aa7.27□□□□□ -1.25
ATXN3-225ENST00000554214 ATAD2BQ9ULI0 1458 aa7.27□□□□□ -1.25
ATXN3-225ENST00000554214 BLACEA4D250 179 aa7.26□□□□□ -1.25
ATXN3-225ENST00000554214 HGSO14964 777 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-225ENST00000554214 SF3A1Q15459 793 aaKnown RBP7.26□□□□□ -1.25
ATXN3-225ENST00000554214 NTRK3Q16288 839 aa7.26□□□□□ -1.25
ATXN3-225ENST00000554214 SOGA3Q5TF21 947 aa7.26□□□□□ -1.25
ATXN3-225ENST00000554214 SCUBE1Q8IWY4 988 aa7.26□□□□□ -1.25
ATXN3-225ENST00000554214 MARCH10Q8NA82 808 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-225ENST00000554214 SMARCC2Q8TAQ2 1214 aa7.26□□□□□ -1.25
ATXN3-225ENST00000554214 FNIP1Q8TF40 1166 aa7.26□□□□□ -1.25
ATXN3-225ENST00000554214 CDC6Q99741 560 aa7.26□□□□□ -1.25
ATXN3-225ENST00000554214 JAM3Q9BX67 310 aa7.26□□□□□ -1.25
ATXN3-225ENST00000554214 ZCCHC4Q9H5U6 513 aa7.26□□□□□ -1.25
ATXN3-225ENST00000554214 FAM221BA6H8Z2 402 aa7.25□□□□□ -1.25
ATXN3-225ENST00000554214 DIAPH1O60610 1272 aaKnown RBP7.25□□□□□ -1.25
ATXN3-225ENST00000554214 DGKIO75912 1065 aa7.25□□□□□ -1.25
ATXN3-225ENST00000554214 PLA2G1BP04054 148 aaKnown RBP7.25□□□□□ -1.25
ATXN3-225ENST00000554214 SERINC3Q13530 473 aa7.25□□□□□ -1.25
ATXN3-225ENST00000554214 LINC01356Q8N9X3 169 aa7.25□□□□□ -1.25
ATXN3-225ENST00000554214 ZBTB38Q8NAP3 1195 aaPredicted RBP7.25□□□□□ -1.25
ATXN3-225ENST00000554214 CDIP1Q9H305 208 aa7.25□□□□□ -1.25
ATXN3-225ENST00000554214 FFAR3O14843 346 aa7.24□□□□□ -1.25
ATXN3-225ENST00000554214 ADCY3O60266 1144 aa7.24□□□□□ -1.25
ATXN3-225ENST00000554214 TRIM13O60858 407 aa7.24□□□□□ -1.25
ATXN3-225ENST00000554214 CHRNA2Q15822 529 aa7.24□□□□□ -1.25
ATXN3-225ENST00000554214 STEAP3Q658P3 488 aa7.24□□□□□ -1.25
ATXN3-225ENST00000554214 CD300LDQ6UXZ3 194 aa7.24□□□□□ -1.25
ATXN3-225ENST00000554214 LBX2Q6XYB7 198 aa7.24□□□□□ -1.25
ATXN3-225ENST00000554214 ETV3LQ6ZN32 361 aa7.24□□□□□ -1.25
ATXN3-225ENST00000554214 LRP10Q7Z4F1 713 aa7.24□□□□□ -1.25
ATXN3-225ENST00000554214 FAM26EQ8N5C1 309 aa7.24□□□□□ -1.25
ATXN3-225ENST00000554214 TP53I13Q8NBR0 393 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms